Plant Taxonomy Research Articles

Identifikasi Tumbuhan Berbiji (Spermatophyta) di Taman Botani Sukorambi Kabupaten Jember untuk Menunjang Mata Kuliah Taksonomi Tumbuhan

Sukorambi Botanical Garden is a natural tourist spot for flora and fauna with a land area of ​​about 12 hectares. In this location, there are about 500 types of plants ranging from lower-grade plants to higher-grade plants. The existence of seed plants (Spermatophyta) of habitus tree in the Botanical Garden has been identified, but there are some plants whose species are not yet known. This research is a descriptive study with a qualitative approach. The method used in this research is a survey method. The research data were analyzed descriptively and identified to the genus level. The results showed that there were 66 genera of seed plants (Spermatophyta) belonging to 30 families. These families are Achariaceae, Anarcadiacea, Annonaceae, Apocynaceae, Araucariaceae, Arecaceae, Bignoniaceae, Burseraceae, Clusiaceae, Ebenaceae, Fabaceae, Gnetaceae, Lamiaceae, Lauraceae, Lythraceae, Malvaceae, Meliaceae, Mimosaceae, Moraceae, Moringaceae, Myristicaceae, Oxalidaceae, Rutaceae, Sapindaceae, Sapotaceae, and Thymelaeaceae. The results of identification can be used as a learning resource to support the Plant Taxonomy course.

ANALSIS DAN PERANCANGAN KAMUS BAHASA ILMIAH TUMBUHAN BERBASIS ANDROID

The scientific name of living things, especially plants, is one of the things that is basically very interesting to learn and know, because the scientific name of living things provides an important role, among others with scientific names it will easily know the characteristics, relationships of relatives, and interactions of living things in the environment. Knowledge of plant classification has generally been taught to high school students and MIPA students or biology majors, but interest in learning about plant taxonomy is still low due to the source of information that is not yet widely available. Therefore, the development of learning media is needed one of them by building an android-based plant scientific language dictionary application that can be one of the alternative learning media for students and students. The algorithm applied is sequential search that performs search faster because the search process is already in order. That way the interest in learning students and students about the scientific language of plants can be encouraged by the spirit in learning by using this learning medium. Based on the research that has been done, the application of the scientific language dictionary of plants can be used by students, students and the public as a means of learning in understanding the scientific names on each plant that is equipped with the alphabetic menu a-z and plant categories and search features to make it easier for users to find plant names

Род Capsicum L. и основные болезни сладкого и острого перца (обзор)

This paper reviews taxonomy, importance and diseases of pepper plants belonging to Capsicum genus. Five species of the genus are domesticated, Capsicum annuum being the most cultivated species followed by C. chinense and C. frutescens while C. baccatum and C. pubescens are grown in limited areas of some regions. Review of the available literature data has shown that more than 122 species of microorganisms can cause pepper diseases, including >58 species of fungi, 11 oomycetes, 15 bacteria, 32 viruses, > 6 species of nematodes, and some higher parasitic plants. From these 18 species of fungi, 2 oomycetes, one bacterium, two viruses, one root-knot nematode, two species of each of dodder and broomrape have been recorded in Uzbekistan. However, all of these organisms but one powdery mildew fungus has been registered on other than pepper plants. Previously the authors of the current paper have found that deadly crown rot of both sweet and hot peppers caused by Fusarium oxysporum (supposedly f. sp. radici-capsici) occurred widely in six districts of Uzbekistan.

Statistical assessment of ecological invariants of plant cover and the possibility of estimating invariants in the taxonomy of plants

In this work, for the first time, ecological invariants for the dry polydominant cereal-forb meadow of theKarelian Isthmus of the Leningrad region and taxonomic invariants of three species of Heracleum L. are determined. It isproposed to use the developed statistical methods for evaluating invariants to differentiate biological objects at all levels ofbiota: molecular, subcellular, cellular, organismic, population, coenotic and ecological.

Abhava pratinidhi dravya: A Comparative Phytochemical Study of Bharangi and Kantakari

Abhava pratinidhi dravya excites the scientific curiosity concerning the Ayurvedic principles behind selection of the substitute drug. Present study had reported a comparative phytochemical study of one such Ayurvedic substitution pair: Solanum surattense Burm.f., a substitute for Clerodendrum serratum L. The study was conducted to understand the logic behind the Abhava pratinidhi dravya (Drug substitution). The strategy was to scrutinize and compare their Ayurvedic properties by literary studies and test the phytochemical profile of these two herbs for biochemical similiarties and differences. On analyzing their Ayurvedic pharmacology (Dravyaguna properties), findings show that both the drugs possess katu and tikta rasa, but Bharangi is katu rasa dominant and Kantakari is tikta rasa dominant drug. Along with this, both drug possess laghu, ruksha and ushna guna in common. Kantakari which contain different properties i.e. sara and tikshna guna. Both drug possess katu vipaka and ushna veerya. Both drugs had been stated to treat majority of respiratory ailments. Phytochemical observations suggest that in Bharangi root extract alkaloids and tannins was present whereas Kantakari root extract was rich in flavonoids content. Saponins was present in maximum amount in both the plant extracts. Despite taxonomically unrelated and morphologically dissimiliar, Bharangi has been substituted by Kantakari drug. In Ayurveda, more importance was given to pharmacological properties of raw drug rather than its botanical classification. Further comparative pre-clinical studies and bio-equivalence clinical studies has been needed to explore the different pharmacological properties.

The Founder of Plant Taxonomy in China: HU Hsen-Hsu

The Founder of Plant Taxonomy in China: HU Hsen-Hsu

Investigation of the Phytochemistry and Antioxidant Activity of Pterocarpus angolensis (Mubvamaropa) from Mupandawana

The present study investigated the phytochemistry and antioxidant activity of Pterocarpus angolensis (Mubvamaropa) from Mupandawana. Pt. angolensis has numerous medicinal uses. The bark, sap, leaves and roots are all used to treat different ailments. The sap is used to stop nose bleeds, treatment of ulcers and kill ringworms. Several studies have supported the use of the tree’s sap to treat cataracts, malaria as well as skin inflammations. Pterocarpus angolensis bark was collected from Gutu, Masvingo province and authenticated by a plant taxonomist at the Zimbabwe National herbarium (Mr Chapano). The bark was cleaned using distilled water and oven dried at 40°C for 4 hours to constant weight. Size reduction was achieved using a Thomas-Wiley laboratory mill model with a 2 mm sieve mesh. The phytochemical analysis revealed that the ethanolic extract had more phyto-constituents than the water extract which only four phyto-constituents present all of which were weakly positive. DPPH scavenging activity was 95.11% at a concentration of 500 μg/mL bark extract, while that of the control, ascorbic acid, was 97.60%. Ascorbic acid had an IC50 value of 4.35 µg/mL while the bark extract had a value of 150.64 µg/mL.

Traditional Medicinal Plants as a Source of Antituberculosis Drugs: A System Review.

Medicinal plants are the chief components in the different oriental formulations in different traditional medical systems worldwide. As a thriving source of medicine, the medicinal plants with antituberculosis (TB) properties inspire the pharmacists to develop new drugs based on their active components or semimetabolites. In the present review, the anti-TB medicinal plants were screened from the scientific literatures, based on the botanical classification and the anti-TB activity. The obtained anti-TB medicinal plants were categorized into three different categories, viz., 159 plants critically examined with a total 335 isolated compounds, 131 plants with their crude extracts showing anti-TB activity, and 27 plants in literature with the prescribed formula by the traditional healers. Our systemic analysis on the medicinal plants can assist the discovery of novel and more efficacious anti-TB drugs.

Species Detection and Segmentation of Multi-specimen Historical Herbaria

Historically, herbarium specimens have provided users with documented occurrences of plants in specific locations over time. Herbarium collections have therefore been the basis of systematic botany for centuries (Younis et al. 2020). According to the latest summary report based on the data from Index Herbariorum, there are around 3400 active herbaria in the world containing 397 million specimens that are spread across 182 countries (Thiers 2021). Exponential growth in high quality image capturing devices induced by the enormous amount of uncovered collections has further led to rising interest in large scale digitization initiatives across the world (Le Bras et al. 2017). As herbarium specimens are increasingly becoming digitised and accessible in online repositories, an important need has also emerged to develop automated tools to process and enrich these collections to facilitate better access to the preserved archives. This rising number of digitised herbarium sheets provides an opportunity to employ computer-based image processing techniques, such as deep learning, to automatically identify species and higher taxa (Carranza-Rojas and Joly 2018, Carranza-Rojas et al. 2017, Younis et al. 2020) or to extract other useful information from the herbaria sheets, such as detecting handwritten text, color bars, scales and barcodes. The species identification task works well for herbarium sheets that have only one species in a page. However, there are many herbarium books that have multiple species on the same page (as shown in Fig. 1) for which the complexity of the identification problem increases tremendously. It also involves a great deal of time and effort if they are to be enriched manually. In this work, we propose a pipeline that can automatically detect, identify, and enrich plant species in multi-specimen herbaria. The core idea of the pipeline is to detect unique plant species and handwritten text around the plant species and map the text to the correct plant species. As shown in Fig. 2, the proposed pipeline begins with the pre-processing of the images. The images are rotated and aligned such that the longest edge is maintained as its height. In the case of herbarium books, the pages are detected and morphological transformations are performed to reduce occlusions (Thirukokaranam Chandrasekar and Verstockt 2020). A YOLOv3 (You Only Look Once version 3) object detection model (Zhao and Li 2020) is trained from scratch to detect plants and text. The model was trained on a dataset of single species herbarium sheets with a mosaic augmentation technique to extend the plants model to detect multiple species. The first results of the training shows impressive results although it could be further improved with more labelled data. We also plan to train an object segmentation model and contrast its performance with the plant detection model for multi-specimen herbarium sheets. After detecting both the plants and the text, the text will be recognized with a state-of-the-art handwritten text recognition (HTR) model. The recognized text can then be matched with a database of specimens, to identify each detected specimen. Furthermore, additional textual metadata (e.g. date, locality, collector's name, institution) visible on the sheet will be recognized and used to enrich the collection.

Possibilities of using leaves cultivated chicory (Cichorium intybus L.) as a medicinal plant material (review)

Common chicory (Cichorium intybus L.) is widely known as a food plant. However, in folk medicine in many countries, the roots and leaves of chicory are used as a choleretic, anti-inflammatory, hypoglycemic agent. In this regard, a promising direction of research is a detailed study of the biological characteristics and chemical composition of this plant in order to substantiate its use for therapeutic and prophylactic purposes. The article presents an analysis of the available information on the botanical classification and biological characteristics, agricultural technology, chemical composition and the use of the aerial part of the cultivated common chicory in scientific and folk medicine. Possible resources for collecting chicory leaves are wild-growing populations, as well as varieties of root chicory, which is grown in Russia as an industrial crop. Under natural conditions, chicory occupies disturbed habitats characterized by low soil fertility, pollution with heavy metals, and increased competition with other ruderal plants. While in the conditions of culture, the best agroecological conditions for growing plants are provided, accelerating their development and contributing to accumulation of biologically active substances in greater quantities, compared with wild ones. In this regard, a promising direction of research is to study the influence of various factors (illumination, temperature, weather conditions, agrotechnical measures, varietal characteristics, growth regulators) on the content, qualitative composition and dynamics of the accumulation of biologically active compounds in the leaves of cultivated common chicory.

Ethnobotanical Survey of Flora and Fauna Species in Kainji Lake National Park New-Bussa Local Government Area, Niger State, Nigeria

This study was carried out to identify the Ethnobotanical uses of flora and fauna species in Kainji Lake National Park New-Bussa Local Government Area, Niger State, Nigeria. The study objectives were to document knowledge and generate data on identification and uses of Plant species and animal species in Borgu and Zugurma sector of the park. Ethnobotanical surveys based on interviews from the park ranges, plant taxonomist and zoologist staff of the park and Botanical survey was carried out based on sample plots. A stratified random sampling was used to select sample sites within the two sector of the Park, based on flora and fauna sub-classification. A total Ten (10) plots of 100m x 100m strips were demarcated within the two sectors. In each plot a total of four (4) 20m x 20m sub-plots were randomly selected for identification of Flora and Fauna resources in both the two sector of the park. Results from Flora resources shows a total of 45 plants species belonging to 21 families were selected.in both the two sector. Family- Leguminosae and Combretaceace were the dominant family in terms of number of species represented. The species are multipurpose and are exploited to satisfy different subsistence needs. Bark and Leaf are the most commonly used Flora parts for medicinal in KLNP. Results from Fauna resources shows that Family-Bovidea and Felidae are the most dominate in the Mammal species, Family-Pythonidea is dominate in Reptile species, Birth has different family and species. Alestidae and Cyprinidae are the dominates in fish found in KLNP while Family-Mochokidae and Bagridae are the most dominates in the fresh-water fish species in Kainji Lake (Northern Nigeria).

On the Utility of Longwave-Infrared Spectral Imaging for Remote Botanical Identification

A multi-year airborne field investigation of remote botanical species identification was conducted involving multiple curated botanical collections. The purpose of the study was to better constrain the observational conditions that most favor remote identification by longwave-infrared spectral imaging and assess the degree to which confidence metrics developed for remote chemical composition determination could be adapted to botanical species classification. Identification success was examined as a function of spatial resolution and viewing obliquity. A key aim was to articulate a procedure for validating inferred species identifications and evaluating the retrieval methodology’s performance for alleviating confusion between species exhibiting spectral similarity at the foliar scale. It was found that several confounding factors degrade confidence in the species identifications to levels that render the approach impractical in the general case. A number of taxa, predominantly evergreen, were nevertheless identified that are amenable to the technique and for which utility may be viable.

Cross-phytogroup assessment of foliar epiphytic mycobiomes.

The foliar surface forms one of the largest aboveground habitats on Earth and maintains plant-fungus relationships that greatly affect ecosystem functioning. Despite many studies with particular plant species, the foliar epiphytic mycobiome has not been studied across a large number of plant species from different taxa. Using high-throughput sequencing, we assessed epiphytic mycobiomes on leaf surfaces of 592 plant species in a botanical garden. Plants of angiosperms, gymnosperms, and pteridophytes were involved. Plant taxonomy, leaf side, growing environment, and evolutionary relationships were considered. We found that pteridophytes showed the higher fungal species diversity, stronger mutualistic fungal interactions, and a greater percentage of putative pathogens than gymnosperms and angiosperms. Plant taxonomic group, leaf side, and growing environment were significantly associated with the foliar epiphytic mycobiome, but the similarity of the mycobiomes among plants was not directly related to the distance of the host evolutionary tree. Our results provide a general understanding of the foliar fungal mycobiomes from pteridophytes to angiosperms. These findings will facilitate our understanding of foliar fungal epiphytes and their roles in plant communities and ecosystems.

International Symposium on Plant Taxonomy and Ethnobotany 13-14, February, 2020, Kolkata

No Abstract.

Characterization of anatomical foliar epidermal features of herbaceous flora of Tilla Jogian, Pakistan by using light microscopy techniques

In current study, 22 herbaceous plant specimens have been examined with the help of light microscope to carry out leaf epidermal anatomy. Foliar micro-morphology of herbaceous plants from Tilla Jogian, Jhelum Pakistan was held first time. The plants were collected from different parts of Tilla Jogian at different elevations. The main objective of the study is to use this information as an aid in plant taxonomy. Significant variations were observed in both qualitative and quantitative features. With the help of microscopy significant variations in characters like stomata size, number, epidermal cell size, shape and number, guard cell size, trichomes, and subsidiary cells were recorded. On the basis of these findings, light microscopy of leaf epidermal anatomical features holds great interest for taxonomists to identify complete taxa. Foliar epidermal anatomy of herbaceous flora serves as baseline data along with taxonomical data and can be helpful in demarcation and limitation of nearly associated taxa to gain better use of anatomical characters.

Partitioning of Environmental and Taxonomic Controls on Brazilian Foliar Content of Carbon and Nitrogen and Stable Isotopes

The Neotropics harbor some of the most diversified woody species in the world, and to understand the nutrient dynamics in these ecosystems, it is crucial to understand the role of plant taxonomy. In addition, biological nitrogen (N) fixation (BNF) in the tropics is one of the key processes affecting the global N cycle. Our objective was to (i) investigate the role of taxonomy and sampling site as predictors of foliar carbon (C) and N concentration and its stable isotopes (i.e., δ13C and δ15N); (ii) assess differences in foliar N, C:N ratio, and δ15N among three functional groups: species of N2-fixers and non-fixers of the Fabaceae family, as well as non-Fabaceae species; and (iii) examine the effect of wood density on tree foliar properties. We hypothesized that Fabaceae specimens in symbiosis with N2-fixers would possess a higher foliar N than non-fixing plants, including those of the Fabaceae family, as well as high-density trees would have higher foliar C and C:N ratio relative to low-density trees, where the latter invest in nutrients instead of structural C. We used a data set composed of 3,668 specimens sampled in three main biomes of Brazil: Amazon, Atlantic Forest, and Cerrado. The partitioning of variance had a higher influence of taxonomy on leaf C, N, and C:N ratio. Conversely, foliar δ13C and δ15N were environmentally constrained. While family was the most important taxonomy level for C, N, and C:N ratio, species played a major role for δ13C and δ15N. Foliar N followed the pattern fixers > non-fixers > non-Fabaceae, while C:N ratio had an opposite trend. In addition, foliar C was correlated with wood density, where high-density > medium-density and low-density woods. The large variability of δ15N was observed among Fabaceae species, demonstrates the complexity of using δ15N as an indicator of BNF. The higher foliar N of Fabaceae non-fixers than non-Fabaceae specimens support the hypothesis that an N-demanding lifestyle is an inherent pattern in this family. Lastly, although observed in some studies, the prediction of foliar properties using wood density is challenging, and future research on this topic is needed.

Spanning the Globe – The Plant Phylogeny Poster (PPP) Project

Historically, wallcharts and posters created by botanical illustrators, often highly skilled artists, have played an important role in teaching botany at the university level. Large-scale panels and posters can visualize complex interrelationships and entire stories in a clear and appealing overview in graphs, tables, and diagrams. Carrying this concept of educational tools into the electronic era, the Plant Phylogeny Poster project uses this approach for displaying evolutionary relationships in systematic botany. The Angiosperm Phylogeny Poster (APP) displays, as phylogenetically arranged clades, the orders and families of flowering plants (with orders hyperlinked to APweb, Stevens, 2001–onwards), the Tracheophyte Phylogeny Poster (TPP) families and genera of ferns and gymnosperms, and the Bryophyte Phylogeny Poster (BPP) orders and families of liverworts, mosses, and hornworts. The portfolio currently also includes about 30 posters on individual orders and families of angiosperms. Each group within these evolutionary trees is matched with essentially relevant morphological features, biogeographic occurrences, and other information in compactly condensed text blocks. All posters are freely available online, some in more than 30 languages, coauthored by a team of more than 130 botanists. The posters are regularly updated, current literature is cited. The project is expanding steadily and rapidly.

Contribution to the flora of Ulziit Mountain in forest steppe region of Mongolia

The Ulziit Mountain has a unique ecosystem which is one of northern branch mountains of Khangai mountain range in Mongolia. Several field survey were conducted in summer in all habitats in different altitudes. A total of 314 taxa were registered belonging to 161 genera from 52 families in Ulziit Mountain flora. The family Asteraceae was found to be the largest with 37 taxa, followed by Poaceae with 30 taxa, Ranunculaceae with 24 taxa, Cyperaceae, Caryophyllaceae and Rosaceae each with 17 taxa, Salicaceae with 16 taxa, and Fabaceae with 15 taxa; in total, these comprised 55.1% of all flora complements in this mountain. During the investigation, 5 species were newly recorded in the Khangai mountains forest-steppe region. The most represented life forms in the flora are hemicryptophytes (71.97%), which are common for mountain steppe vegetation. In a time of climate change, effective conservation of nature is needed at an ecosystem such as a single mountain particularly for endemic, relict and other salient species. Furthermore, such a detailed floristic survey is important for finding new records in the field of plant taxonomy and conservation of nature in these specific areas.
 Bangladesh J. Plant Taxon. 28(1): 195-215, 2021 (June)

Elusive species criteria and paradigms of botany

The development of botanical science and the improvement of methods used to identify the boundaries of species lead to constant changes in the criteria and volume of species in various systematic groups of plants. Currently, to solve these problems, modern methods of geno- and chemosystematics (for example, use of PCR, ITSS, and other markers), methods of discriminant and factor analyses, assessment of boundaries of ecological and climatic niches of different species, approaches of chemosystematics and metabolomics are used. However, the emergence of a large number of different modern approaches to estimate the volume of species has not simplified the task of plant taxonomists. Instead, it gave them the task to select or reasonably combine reliable methods. The latter would allow to progress in solving this difficult tasks and set priorities for the development of an integrated methodological approach to the study criteria and volumes of species.

Genetic diversity in several genotypes of Algerian lentil using biochemical markers

Abstract. Hammadi H, Hammouda-Bousbia D, Chaib G, Tir A. 2021. Genetic diversity in several genotypes of Algerian lentil using biochemical markers. Biodiversitas 22: 3494-2500. Studying seed storage proteins in legumes (Fabaceae) is very important besides its economic value; seed storage proteins play an important role in plant taxonomy because of the stability of their contents. The grain protein content and protein profiles of 12 lentil genotypes (Lens culinaris Medik.) were characterized based on protein profiling through SDS-PAGE. The obtained gel has shown forty bands ranged from 13 to 21 with molecular weight 10 to 120 KDa. Of which six monomorphic bands, thirty-four polymorphic bands and five unique bands in Flip90-31, Idlep3, idlep2, Idlep4 and Radjas genotypes. The protein banding pattern polymorphism (84%) revealed an inter-genotypic variability. The Idlep3 genotype is characterized by specific bands (or a specific marker), followed by the Flip90-31 genotype. So these two genotypes can be considered as valuable gene resources for further breeding programs.