Information Extraction Tasks Research Articles

RAMIE: retrieval-augmented multi-task information extraction with large language models on dietary supplements.

To develop an advanced multi-task large language model (LLM) framework for extracting diverse types of information about dietary supplements (DSs) from clinical records. We focused on 4 core DS information extraction tasks: named entity recognition (2949 clinical sentences), relation extraction (4892 sentences), triple extraction (2949 sentences), and usage classification (2460 sentences). To address these tasks, we introduced the retrieval-augmented multi-task information extraction (RAMIE) framework, which incorporates: (1) instruction fine-tuning with task-specific prompts; (2) multi-task training of LLMs to enhance storage efficiency and reduce training costs; and (3) retrieval-augmented generation, which retrieves similar examples from the training set to improve task performance. We compared the performance of RAMIE to LLMs with instruction fine-tuning alone and conducted an ablation study to evaluate the individual contributions of multi-task learning and retrieval-augmented generation to overall performance improvements. Using the RAMIE framework, Llama2-13B achieved an F1 score of 87.39 on the named entity recognition task, reflecting a 3.51% improvement. It also excelled in the relation extraction task with an F1 score of 93.74, a 1.15% improvement. For the triple extraction task, Llama2-7B achieved an F1 score of 79.45, representing a significant 14.26% improvement. MedAlpaca-7B delivered the highest F1 score of 93.45 on the usage classification task, with a 0.94% improvement. The ablation study highlighted that while multi-task learning improved efficiency with a minor trade-off in performance, the inclusion of retrieval-augmented generation significantly enhanced overall accuracy across tasks. The RAMIE framework demonstrates substantial improvements in multi-task information extraction for DS-related data from clinical records.

Grammar-constrained decoding for structured information extraction with fine-tuned generative models applied to clinical trial abstracts.

In the field of structured information extraction, there are typically semantic and syntactic constraints on the output of information extraction (IE) systems. These constraints, however, can typically not be guaranteed using standard (fine-tuned) encoder-decoder architectures. This has led to the development of constrained decoding approaches which allow, e.g., to specify constraints in form of context-free grammars. An open question is in how far an IE system can be effectively guided by a domain-specific grammar to ensure that the output structures follow the requirements of a certain domain data model. In this work we experimentally investigate the influence of grammar-constrained decoding as well as pointer generators on the performance of a domain-specific information extraction system. For this, we consider fine-tuned encoder-decoder models, Longformer and Flan-T5 in particular, and experimentally investigate whether the addition of grammar-constrained decoding and pointer generators improve information extraction results. Toward this goal, we consider the task of inducing structured representations from abstracts describing clinical trials, relying on the C-TrO ontology to semantically describe the clinical trials and their results. We frame the task as a slot filling problem where certain slots of templates need to be filled with token sequences occurring in the input text. We use a dataset comprising 211 annotated clinical trial abstracts about type 2 diabetes and glaucoma for training and evaluation. Our focus is on settings in which the available training data is in the order of a few hundred training examples, which we consider as a low-resource setting. In all our experiments we could demonstrate the positive impact of grammar-constrained decoding, with an increase in F 1 score of pp 0.351 (absolute score 0.413) and pp 0.425 (absolute score 0.47) for the best-performing models on type 2 diabetes and glaucoma datasets, respectively. The addition of the pointer generators had a detrimental impact on the results, decreasing F 1 scores by pp 0.15 (absolute score 0.263) and pp 0.198 (absolute score 0.272) for the best-performing pointer generator models on type 2 diabetes and glaucoma datasets, respectively. The experimental results indicate that encoder-decoder models used for structure prediction for information extraction tasks in low-resource settings clearly benefit from grammar-constrained decoding guiding the output generation. In contrast, the evaluated pointer generator models decreased the performance drastically in some cases. Moreover, the performance of the pointer models appears to depend both on the used base model as well as the function used for aggregating the attention values. How the size of large language models affects the performance benefit of grammar-constrained decoding remains to be more structurally investigated in future work.

Electronic Health Records (EHR) Extraction Using Various NLP Models

Information recorded in electronic medical health records, clinical reports, and summaries has the possibility of revolutionizing health-related research and its corresponding industry. EMR data can be used for epidemiological studies, disease registries, data banks, drug safety surveillance, clinical trials, and healthcare audits. With the rapid adoption of electronic health records (EHRs), it is desirable to harvest information and knowledge from EHRs to support automated systems and to enable secondary use of EHRs for clinical and translational research; thereby increasing efficiency. One critical component which is predominantly used to facilitate the secondary use of EHR data is information extraction (IE) task, which automatically extracts and encodes clinical information from a given text. Now, a natural language processing model (NLP) focuses on “developing computational models for understanding the interaction between data science and language”. In the clinical domain, researchers have often used NLP systems to identify clinical syndromes and common biomedical concepts from imaging data, radiology reports, discharge summaries, problem lists, nursing documentation, drug reviews, and medical education documents. These data can help doctors determine patients' health condition(s) including diagnostic information, procedures and tests performed, treatment results, drugs administered, and more. Therefore, we hope to gain some insights and develop strategies to improve the utilization of these NLP systems in the clinical domain. We hope to provide a vision for addressing the existing data challenge(s) in this domain. For this, we would look at the various models that have been used/published over the years and test them for their attributes including effectiveness, accuracy, precision, etc. We believe that adding a probabilistic graphical model framework for structured output prediction would further improve the performance of our system. This experiment remains our future work.

Named entity recognition in government domain: A systematic literature review

Named Entity Recognition (NER), a core task in Information Extraction (IE) alongside Relation Extraction (RE), identifies and extracts entities like place and person names in various domains. NER has improved business processes in both public and private sectors but remains underutilized in government institutions, especially in developing countries like Indonesia. This study examines which government fields have utilized NER over the past five years, evaluates system performance, identifies common methods, highlights countries with significant adoption, and outlines current challenges. Over 64 international studies from 15 countries were selected using PRISMA 2020 guidelines. The findings are synthesized into a preliminary ontology design for Government NER.

CNN based multi-label image classification for presentation recommender system

Recommender systems are super popular nowadays for giving personalized recommendations to users. The paper focuses on a special type of recommender system aimed to advise an improvement of a user’s presentation based on slides classification. Classification is a fundamental task in information extraction and retrieval with a goal to assign given resource to a predefined class. In some cases, as in slides’ categorization, resources can belong to multiple classes, leading to a multi-labelled classification problem. Two different approaches for solving a multi-labelled image classification problem for the purpose of a presentation recommender system are suggested and evaluated in the paper. They are based on problem transformation and algorithm adaptation strategies and utilize a convolutional neural network for model training.

Business insights using RAG–LLMs: a review and case study

ABSTRACT As organizations increasingly rely on diverse data sources like invoices and surveys, efficient Information Extraction (IE) is crucial. Natural Language Processing (NLP) enhances IE through tasks such as Named Entity Recognition (NER), Relation Extraction (RE), Event Extraction (EE), Term Extraction (TE), and Topic Modeling (TM). However, implementing these methods requires significant expertise, which smaller organizations often lack. Large Language Models (LLMs), powered by Generative Artificial Intelligence (GenAI), can address this by performing multiple IE tasks without extensive development costs. However, LLMs may struggle with domain-specific accuracy. Integrating Retrieval-Augmented Generation (RAG) with LLMs improves precision by incorporating external data. Despite the potential, research on RAG-LLM applications in the business domain is limited. This article reviews Business IE systems, explores RAG-LLM applications across disciplines, and presents a case study demonstrating how RAG-LLMs can enhance business insights, offering scalable, cost-effective solutions.

Political-RAG: using generative AI to extract political information from media content

ABSTRACT In the digital era, media content is crucial for political analysis, providing valuable insights through news articles, social media posts, speeches, and reports. Natural Language Processing (NLP) has transformed Political Information Extraction (IE), automating tasks such as event extraction and sentiment analysis. Traditional NLP methods, while effective, are often task-specific and require specialized expertise. In contrast, Large Language Models (LLMs) powered by Generative Artificial Intelligence (GenAI) offer a more integrated solution. However, domain-specific challenges persist, which led to the development of the Retrieval-Augmented Generation (RAG) framework. RAG enhances LLMs by incorporating external data retrieval, addressing issues related to data availability. To demonstrate RAG’s capabilities, we introduce the Political-RAG system, designed to extract political event information from media content, including Twitter data and news articles. Initially developed for event extraction, the Political-RAG system lays the foundation for developing various complex Political IE tasks. These include detecting hate speech, analyzing conflicts, assessing political bias, and evaluating social trends, sentiment, and opinions.

Developing Semantic Textual Similarity for Guragigna Language Using Deep Learning Approach

Semantic Similarity is one of the highest levels of NLP. STS has significant advantages in NLP applications like information retrieval, information extraction, text summarization, data mining, machine translation, and other tasks. This research aims to present a deep learning approach for capturing semantic textual similarity (STS) in the Guragigna. The methodology involves collecting a Guragigna language corpus and preprocessing the text data and text representation is done using the Universal Sentence Encoder (USE), along with word embedding techniques including Word2Vec and GloVe and mean Square Error (MSE) is used to measure the performance. In the experimentation phase, models like LSTM, Bidirectional RNN, GRU, and Stacked RNN are trained and evaluated using different embedding techniques. The results demonstrate the efficacy of the developed models in capturing semantic textual similarity in the Guragigna language. Across different embedding techniques, including Word2Vec, GloVe, and USE, the Bidirectional RNN model with USE embedding achieves the lowest MSE of 0.0950 and the highest accuracy of 0.9244. GloVe and Word2Vec embedding also show competitive performance with slightly higher MSE and lower accuracy. The Universal Sentence Encoder consistently emerges as the top-performing embedding across all RNN architectures. The research results demonstrate the effectiveness of LSTM, GRU, Bi RNN, and Stacked RNN models in measuring semantic textual similarity in the Guragigna language.

Joint Extraction of Biomedical Events Based on Dynamic Path Planning Strategy and Hybrid Neural Network.

Biomedical event detection is a pivotal information extraction task in molecular biology and biomedical research, which provides inspiration for the medical search, disease prevention, and new drug development. The existing methods usually detect simple biomedical events and complex events with the same model, and the performance of the complex biomedical event extraction is relatively low. In this paper, we build different neural networks for simple and complex events respectively, which helps to promote the performance of complex event extraction. To avoid redundant information, we design dynamic path planning strategy for argument detection. To take full use of the information between the trigger identification and argument detection subtasks, and reduce the cascading errors, we build a joint event extraction model. Experimental results demonstrate our approach achieves the best F-score on the biomedical benchmark MLEE dataset and outperforms the recent state-of-the-art methods.

Causal-relationship representation enhanced joint extraction model for elements and relationships

The joint extraction of elements such as entities, relations, events, and their arguments, along with their specific interrelationships, is a critical task in natural language processing. Existing research often employs implicit handling of interactions between tasks through techniques like shared encodings or parameter sharing, lacking explicit modeling of the specific relationships between tasks. This limitation hinders the full utilization of inter-task correlation information and impacts effective collaboration between tasks. To address this, we propose a model for joint extraction of elements and relations based on causal relationship representation enhancement (CRE). This model aims to capture specific relationships between tasks in multiple stages, facilitating finer adjustments and optimization of subtasks and thereby enhancing the overall model performance. Specifically, CRE comprises three key modules: feature adaptation, feature interaction, and feature fusion. The feature adaptation module selects and adjusts features from shared encodings based on the requirements of specific tasks to better adapt to semantic differences between different tasks. The feature interaction module employs causal reasoning to comprehensively capture the causal relationships between tasks while mitigating negative transfer brought about by interference from semantic information. The feature fusion module further integrates features to obtain optimized task-specific representations. Ultimately, CRE exhibits a significant improvement in average performance across multiple information extraction tasks.

CJE-PCHF: Chinese Joint Entity and Relation Extraction Model Based on Progressive Contrastive Learning and Heterogeneous Feature Fusion

The joint extraction of entities and relations is a critical task in information extraction, and its performance directly affects the performance of downstream tasks. However, existing joint extraction models based on deep learning exhibit weak processing capabilities for the phenomenon of multiple pronunciations of one character and multiple characters of one pronunciation when processing Chinese texts, resulting in a performance loss. To address these issues, this paper introduces part-of-speech (POS) and pinyin features to aid the model in learning semantic features that are more contextually appropriate. We propose a Chinese Joint Entity and Relation Extraction Model based on progressive contrastive learning and heterogeneous feature fusion (CJE-PCHF). During model training, an interactive fusion network based on progressive contrastive learning is employed to learn the dependencies between pinyin, POS, and semantic features. This guides the model in heterogeneous feature fusion, capturing higher-order semantic associations between heterogeneous features. On the commonly used DuIE evaluation dataset for joint extraction, our model achieved a significant improvement, with the F1 score increasing by 5.4% compared to the benchmark model CasRel.

Better together: Automated app review analysis with deep multi-task learning

Context:User reviews of mobile apps provide an important communication channel between developers and users. Existing approaches to automated app review analysis mainly focus on one task (e.g., bug classification task, information extraction task, etc.) at a time, and are often constrained by the manually defined patterns and the ignorance of the correlations among the tasks. Recently, multi-task learning (MTL) has been successfully applied in many scenarios, with the potential to address the limitations associated with app review mining tasks. Objective:In this paper, we propose MABLE, a deep MTL-based and semantic-aware approach, to improve app review analysis by exploiting task correlations. Methods:MABLE jointly identifies the types of involved bugs reported in the review and extracts the fine-grained features where bugs might occur. It consists of three main phases: (1) data preparation phase, which prepares data to allow data sharing beyond single task learning; (2) model construction phase, which employs a BERT model as the shared representation layer to capture the semantic meanings of reviews, and task-specific layers to model two tasks in parallel; (3) model training phase, which enables eavesdropping by shared loss function between the two related tasks. Results:Evaluation results on six apps show that MABLE outperforms ten commonly-used and state-of-the-art baselines, with the precision of 79.76% and the recall of 79.24% for classifying bugs, and the precision of 79.83% and the recall of 80.33% for extracting problematic app features. The MTL mechanism improves the F-measure of two tasks by 3.80% and 4.63%, respectively. Conclusion:The proposed approach provides a novel and effective way to jointly learn two related review analysis tasks, and sheds light on exploring other review mining tasks.

How Does a Generative Large Language Model Perform on Domain-Specific Information Extraction?─A Comparison between GPT-4 and a Rule-Based Method on Band Gap Extraction.

The advent of generative Large Language Models (LLMs) has greatly impacted the field of Natural Language Processing. However, it is inconclusive how generative LLMs perform on domain-specific information extraction tasks. This study compares the performance of GPT-4 and a rule-based information extraction method based on ChemDataExtractor on band gap information extraction, a task that has important implications for the materials science domain. No training data is required for either method, which is desirable because there is a lack of training data in the materials science domain compared with a variety of material information that is of interest. Manual evaluation on 415 randomly selected articles showed that the GPT-4 model achieved a higher level of accuracy in extracting materials' band gap information than the rule-based method (Correctness 87.95% vs 51.08%, Partial correctness 11.33% vs 36.87%, incorrectness 0.72% vs 12.05%). Further analysis of the errors reveals the strengths and weaknesses of the GPT-4 model compared to the rule-based method. The GPT-4 model shows stronger performance in interdependency resolution and complicated material name recognition, while it also has weaknesses in hallucination, identifying band gap values, and identifying band gap types. Revised prompt based on the error analysis leads to improved accuracy for GPT-4. To the best of our knowledge, this study is the first to compare the GPT-4 model and ChemDataExtractor for the band gap extraction task. This study provides evidence to support using generative LLMs for domain-specific information extraction tasks.

A Class-Incremental Learning Method for Interactive Event Detection via Interaction, Contrast and Distillation

Event detection is a crucial task in information extraction. Existing research primarily focuses on machine automatic detection tasks, which often perform poorly in certain practical applications. To address this, an interactive event-detection mode of “machine recommendation-human review–machine incremental learning” was proposed. In this mode, we study a few-shot continual class-incremental learning scenario, where the challenge is to learn new-class events with limited samples while preserving memory of old class events. To tackle these challenges, we propose a class-incremental learning method for interactive event detection via Interaction, Contrast and Distillation (ICD). We design a replay strategy based on representative and confusable samples to retain the most valuable samples under limited conditions; we introduce semantic-boundary-smoothness contrastive learning for effective learning of new-class events with few samples; and we employ hierarchical distillation to mitigate catastrophic forgetting. These methods complement each other and show strong performance. Experimental results demonstrate that, in the 5-shot 5-round class incremental-learning settings on two Chinese event-detection datasets ACE and DuEE, our method achieves final recall rates of 71.48% and 90.39%, respectively, improving by 6.86% and 3.90% over the best baseline methods.

Development of message passing-based graph convolutional networks for classifying cancer pathology reports

BackgroundApplying graph convolutional networks (GCN) to the classification of free-form natural language texts leveraged by graph-of-words features (TextGCN) was studied and confirmed to be an effective means of describing complex natural language texts. However, the text classification models based on the TextGCN possess weaknesses in terms of memory consumption and model dissemination and distribution. In this paper, we present a fast message passing network (FastMPN), implementing a GCN with message passing architecture that provides versatility and flexibility by allowing trainable node embedding and edge weights, helping the GCN model find the better solution. We applied the FastMPN model to the task of clinical information extraction from cancer pathology reports, extracting the following six properties: main site, subsite, laterality, histology, behavior, and grade.ResultsWe evaluated the clinical task performance of the FastMPN models in terms of micro- and macro-averaged F1 scores. A comparison was performed with the multi-task convolutional neural network (MT-CNN) model. Results show that the FastMPN model is equivalent to or better than the MT-CNN.ConclusionsOur implementation revealed that our FastMPN model, which is based on the PyTorch platform, can train a large corpus (667,290 training samples) with 202,373 unique words in less than 3 minutes per epoch using one NVIDIA V100 hardware accelerator. Our experiments demonstrated that using this implementation, the clinical task performance scores of information extraction related to tumors from cancer pathology reports were highly competitive.

CMCN: Chinese medical concept normalization using continual learning and knowledge-enhanced

Medical Concept Normalization (MCN) is a crucial process for deep information extraction and natural language processing tasks, which plays a vital role in biomedical research. Although MCN in English has achieved significant research achievements, Chinese medical concept normalization (CMCN) remains insufficiently explored due to its complex syntactic structure and the paucity of Chinese medical semantic and ontology resources. In recent years, deep learning has been extensively applied across numerous natural language processing tasks, owing to its robust learning capabilities, adaptability, and transferability. It has proven to be well suited for intricate and specialized knowledge discovery research in the biomedical field. In this study, we conduct research on CMCN through the lens of deep learning. Specifically, our research introduces a model that leverages polymorphic semantic information and knowledge enhanced through multi-task learning and retain more important medical features through continual learning. As the cornerstone of CMCN, disease names are the main focus of this research. We evaluated various methodologies on Chinese disease dataset built by ourselves, finally achieving 76.12 % on Accuracy@1, 87.20 % on Accuracy@5 and 90.02 % on Accuracy@10 with our best-performing model GCBM-BSCL. This research not only advances the fields of knowledge mining and medical concept normalization but also enhances the integration and application of artificial intelligence in the medical and health field. We have published the source code and results on https://github.com/BearLiX/CMCN.

GAT-Based Bi-CARU with Adaptive Feature-Based Transformation for Video Summarisation

Nowadays, video is a common social media in our lives. Video summarisation has become an interesting task for information extraction, where the challenge of high redundancy of key scenes leads to difficulties in retrieving important messages. To address this challenge, this work presents a novel approach called the Graph Attention (GAT)-based bi-directional content-adaptive recurrent unit model for video summarisation. The model makes use of the graph attention approach to transform the visual features of interesting scene(s) from a video. This transformation is achieved by a mechanism called Adaptive Feature-based Transformation (AFT), which extracts the visual features and elevates them to a higher-level representation. We also introduce a new GAT-based attention model that extracts major features from weight features for information extraction, taking into account the tendency of humans to pay attention to transformations and moving objects. Additionally, we integrate the higher-level visual features obtained from the attention layer with the semantic features processed by Bi-CARU. By combining both visual and semantic information, the proposed work enhances the accuracy of key-scene determination. By addressing the issue of high redundancy among major information and using advanced techniques, our method provides a competitive and efficient way to summarise videos. Experimental results show that our approach outperforms existing state-of-the-art methods in video summarisation.

COfEE: A comprehensive ontology for event extraction from text

Large volumes of data are constantly being published on the web; however, the majority of this data is often unstructured, making it difficult to comprehend and interpret. To extract meaningful and structured information from such data, researchers and practitioners have turned to Information Extraction (IE) methods. One of the most challenging IE tasks is Event Extraction (EE), which involves extracting information related to specific incidents and their associated actors from text. EE has broad applications, including building a knowledge base, information retrieval, summarization, and online monitoring systems. Over the past few decades, various event ontologies, such as ACE, CAMEO, and ICEWS, have been developed to define event forms, actors, and dimensions of events observed in text. However, these ontologies have some limitations, such as covering only a few topics like political events, having inflexible structures in defining argument roles, lacking analytical dimensions, and insufficient gold-standard data. To address these concerns, we propose a new event ontology, COfEE, which integrates expert domain knowledge, previous ontologies, and a data-driven approach for identifying events from text. COfEE comprises two hierarchy levels (event types and event sub-types) that include new categories related to environmental issues, cyberspace, criminal activity, and natural disasters that require real-time monitoring. In addition, dynamic roles are defined for each event sub-type to capture various dimensions of events. The proposed ontology is evaluated on Wikipedia events, and it is shown to be comprehensive and general. Furthermore, to facilitate the preparation of gold-standard data for event extraction, we present a language-independent online tool based on COfEE. A gold-standard dataset annotated by ten human experts consisting of 24,000 news articles in Persian according to the COfEE ontology is also prepared. To diversify the data, news articles from the Wikipedia event portal and the 100 most popular Persian news agencies between 2008 and 2021 were collected. Finally, we introduce a supervised method based on deep learning techniques to automatically extract relevant events and their corresponding actors.

The method of linear-logical operators and logical equations in information extraction tasks

Relational and logical methods of knowledge representation play a key role in creating a mathematical basis for information systems. Predicate algebra and predicate operators are among the most effective tools for describing information in detail. These tools make it easy to formulate formalized information, create database queries, and simulate human activity. In the context of the new need for reliable and efficient data selection, a problem arises in deeper analysis. Subject of the study is the theory of quantum linear equations based on the algebra of linear predicate operations, the formal apparatus of linear logic operators and methods for solving logical equations in information extraction tasks. Aim of the study is a developing of a method for using linear logic operators and logical equations to extract information. This approach can significantly optimize the process of extracting the necessary information, even in huge databases. Main tasks: analysis of existing approaches to information extraction; consideration of the theory of linear logic operators; study of methods for reducing logic to an algebraic form; analysis of logical spaces and the algebra of finite predicate actions and the theory of linear logic operators. The research methods involve a systematic analysis of the mathematical structure of the algebra of finite predicates and predicate functions to identify the key elements that affect the query formation process. The method of using linear logic operators and logical equations for information extraction is proposed. The results of the study showed that the method of using linear logic operators and logical equations is a universal and adaptive tool for working with algebraic data structures. It can be applied in a wide range of information extraction tasks and prove its value as one of the possible methods of information processing. Conclusion. The paper investigates formal methods of intelligent systems, in particular, ways of representing knowledge in accordance with the peculiarities of the field of application and the language that allows encoding this knowledge for storage in computer memory. The proposed method can be implemented in the development of language interfaces for automated information access systems, in search engine algorithms, for logical analysis of information in databases and expert systems, as well as in performing tasks related to object recognition and classification.

OpenChemIE: An Information Extraction Toolkit for Chemistry Literature.

Information extraction from chemistry literature is vital for constructing up-to-date reaction databases for data-driven chemistry. Complete extraction requires combining information across text, tables, and figures, whereas prior work has mainly investigated extracting reactions from single modalities. In this paper, we present OpenChemIE to address this complex challenge and enable the extraction of reaction data at the document level. OpenChemIE approaches the problem in two steps: extracting relevant information from individual modalities and then integrating the results to obtain a final list of reactions. For the first step, we employ specialized neural models that each address a specific task for chemistry information extraction, such as parsing molecules or reactions from text or figures. We then integrate the information from these modules using chemistry-informed algorithms, allowing for the extraction of fine-grained reaction data from reaction condition and substrate scope investigations. Our machine learning models attain state-of-the-art performance when evaluated individually, and we meticulously annotate a challenging dataset of reaction schemes with R-groups to evaluate our pipeline as a whole, achieving an F1 score of 69.5%. Additionally, the reaction extraction results of OpenChemIE attain an accuracy score of 64.3% when directly compared against the Reaxys chemical database. OpenChemIE is most suited for information extraction on organic chemistry literature, where molecules are generally depicted as planar graphs or written in text and can be consolidated into a SMILES format. We provide OpenChemIE freely to the public as an open-source package, as well as through a web interface.