Microstructural evolution of a Solid Oxide Electrolyser Cell (SOEC) Ni–YSZ cermet cathode is investigated using three dimensional electrode characterisations. 3D reconstructions are obtained on a reference and two long-term tested cells, which were maintained at −0.5 and −0.8 A cm−2 for 1000 h at 800 °C. During the long term tests, air was fed at the anode and a mixture of 10% H2–90% H2O was fed at the cathode. In this framework, reconstructions have been obtained from synchrotron X-ray nano-tomography technique. Microstructural properties extracted from the 3D reconstructions exhibit an evolution during the tests. Triple Phase Boundary length is decreasing from 10.49 ± 1.18 μm−2 for the reference cell to 6.18 ± 0.6 μm−2 for the long term tested cell at −0.8 A cm−2. Evolutions of morphological parameters were introduced in an in-house multi-scale model to evaluate their impacts on the electrode degradation, and hence, on the global SOEC performance.