Forest ecosystems can store massive amounts of organic carbon (OC) deep in their soils. Soil OC (SOC) is composed of several complex organic compounds of which groupings of these organic compounds can provide an insight into evaluating the formation and fate of SOC. However, there is little information available regarding the chemical composition of deep forest SOC and how they compare to upper soil depths. The objective of this study was to explore the SOC chemistry changes with increasing soil depth on a fine spatial scale in a planted forest soil derived from young volcanic erupted airfall deposits. Soil core samples to 1 m depth were collected from Puruki Experimental Forest (New Zealand) and examined for incremental depth changes in SOC functional groups, or chemical shift regions, using solid-state 13C cross polarisation magic angle spinning nuclear magnetic resonance (13C CPMAS-NMR) spectroscopy. The results showed that soil depth was a driver of change in soil chemical shift regions. The presence of a coarse-textured soil horizon, lapilli layer, at depth was a driver of significant (p < 0.05) differences between SOC functional groups. In the upper soil profile (0–10 cm), the chemical shift distribution was dominated by O-alkyl C (39%) followed by alkyl C (32%), aromatic C (23%), and carboxyl C (6%). In the deep soil layers, we found alkyl C increased below the lapilli layer (varying depth > 50 cm) compared to above the lapilli layer. In the deep soil layers the alkyl C was the dominant functional group (55%), followed by O-alkyl C (28%). Furthermore, there was a decrease at depth in aromatic (12%) and carboxyl C (5%). The A/O-A ratio increased with depth from soil above the lapilli layer compared to soils below the lapilli layer indicating a greater degree of organic matter decomposition and a corresponding decrease in the labile OC fractions. Within the lapilli layer the SOC functional groups and A/O-A ratio were highly variable. These results highlight that changes in SOC chemical composition occur with increasing soil depth, a property of deep soil that is frequently understudied, and are highly influenced by the multi layered nature of soil derived from volcanic airfall deposits.