Songbird Species Research Articles

Climate refugia for three Afromontane forest‐dependent bird species in south‐eastern South Africa

AbstractAimPleistocene climate shifts were influential in shaping biodiversity patterns for forest‐dependent species. Within southern Africa, palaeoclimatic shifts possibly homogenised subtropical Afromontane forest biodiversity, yet these forests continue to harbour unique diversity. For the three songbird species with different natural histories, we investigated the refugial role of subtropical Afromontane and scarp forests and explored specifically how palaeoclimatic events impacted genetic connectivity among forest patches.LocationMaputaland‐Pondoland‐Albany Biodiversity Hotspot, south‐eastern South Africa.TaxonBatis capensis, Phylloscopus ruficapilla and Pogonocichla stellata.MethodsMitochondrial control region sequences and microsatellite data were used to assess genetic diversity and population structure among 406 birds. Demographic change was inferred using Bayesian skyline plots (BSPs), and approximate Bayesian computations (ABCs) were used to identify gene flow trends among putative refugia. Environmental niche models (ENMs) were used to infer past occurrence probabilities.ResultsSpecies BSPs supported regional presence predating the Last Glacial Maximum (21 kya) and indicated post‐glacial population expansions. ABC modelling revealed that present‐day gene flow trends emerged largely during the current interglacial (<12 kya), suggesting that thermal maxima promote regional forest expansion. The north‐eastern source of gene flow in all the three species suggested a post‐glacial influx from refugia further north, while southern scarp forests sustained secondary source populations for B. capensis and P. ruficapilla. High gene flow signatures from south‐western forests in B. capensis and especially P. stellata alluded to hidden source populations in the under‐surveyed southern Afrotemperate forests—the southernmost Afromontane forest bloc. ENMs corroborated both scarp and southern Afrotemperate forests as glacial refugia and demonstrated persistent regional population presence over the past 120 kya.Main ConclusionsThe population genetics and palaeodistribution of the three bird species indicate their regional persistence throughout the late Pleistocene, suggesting that Afromontane and scarp forests of south‐eastern South Africa served as refugia for subtropical African avian forest biota.

The neural distribution of the avian homologue of oxytocin, mesotocin, in two songbird species, the zebra finch and the canary: A potential role in song perception and production.

The avian homologue of oxytocin (OT), formerly called mesotocin, influences social behaviors in songbirds and potentially song production. We sought to characterize the distribution of OT peptide in the brain of two songbird species: canaries (Serinus canaria) and zebra finches (Taeniopygia guttata). To visualize OT, we performed immunocytochemistry using an antibody previously shown to identify OT in avian species. In both canaries and zebra finches, dense OT‐ir perikarya were located in the paraventricular nucleus (PVN), preoptic area (POA), supraoptic nucleus (SON), and medial bed nucleus of the stria terminalis (BNSTm). We also observed morphologically distinct OT‐ir cells scattered throughout the mesopallium. OT‐ir fibers were observed in the PVN, ventral medial hypothalamus (VMH), periaqueductal gray (PAG), intercollicular nucleus (ICo), and ventral tegmental area (VTA). We also observed punctate OT‐ir fibers in the song control nucleus HVC. In both male and female canaries, OT‐ir fibers were present in the lateral septum (LS), but innervation was greater in males. We did not observe this sex difference in zebra finches. Much of the OT staining observed is consistent with general distributions within the vertebrate hypothalamus, indicating a possible conserved function. However, some extra‐hypothalamic distributions, such as perikarya in the mesopallium, may be specific to songbirds and play a role in song perception and production. The presence of OT‐ir fibers in HVC and song control nuclei projecting dopaminergic regions provides anatomical evidence in support of the idea that OT can influence singing behavior—either directly via HVC or indirectly via the PAG, VTA, or POA.

Experimentally broadcast ocean surf and river noise alters birdsong.

Anthropogenic noise and its effects on acoustic communication have received considerable attention in recent decades. Yet, the natural acoustic environment’s influence on communication and its role in shaping acoustic signals remains unclear. We used large-scale playbacks of ocean surf in coastal areas and whitewater river noise in riparian areas to investigate how natural sounds influences song structure in six songbird species. We recorded individuals defending territories in a variety of acoustic conditions across 19 study sites in California and 18 sites in Idaho. Acoustic characteristics across the sites included naturally quiet ‘control’ sites, ‘positive control’ sites that were adjacent to the ocean or a whitewater river and thus were naturally noisy, ‘phantom’ playback sites that were exposed to continuous broadcast of low-frequency ocean surf or whitewater noise, and ‘shifted’ playback sites with continuous broadcast of ocean surf or whitewater noise shifted up in frequency. We predicted that spectral and temporal song structure would generally correlate with background sound amplitude and that signal features would differ across site types based on the spectral profile of the acoustic environment. We found that the ways in which song structure varied with background acoustics were quite variable from species to species. For instance, in Idaho both the frequency bandwidth and duration of lazuli bunting (Passerina amoena) and song sparrow (Melospiza melodia) songs decreased with elevated background noise, but these song features were unrelated to background noise in the warbling vireo (Vireo gilvus), which tended to increase both the minimum and maximum frequency of songs with background noise amplitude. In California, the bandwidth of the trill of white-crowned sparrow (Zonotrichia leucophrys) song decreased with background noise amplitude, matching results of previous studies involving both natural and anthropogenic noise. In contrast, wrentit (Chamaea fasciata) song bandwidth was positively related to the amplitude of background noise. Although responses were quite heterogeneous, song features of all six species varied with amplitude and/or frequency of background noise. Collectively, these results provide strong evidence that natural soundscapes have long influenced vocal behavior. More broadly, the evolved behavioral responses to the long-standing challenges presented by natural sources of noise likely explain the many responses observed for species communicating in difficult signal conditions presented by human-made noise.

Do oil palm plantations provide quality habitat for migratory birds? A case study from Mexico

Habitat loss and degradation represent a major threat to Nearctic-neotropical migratory birds in the tropics. Managed agroecosystems have the potential to mitigate some impacts of land conversion, however, we know little regarding the quality of expanding oil palm plantation habitat for migratory birds in the neotropics. In this study, we used sex and age ratios, body condition, fat deposition, and muscle mass to assess oil palm habitat quality for seven species of migratory songbirds. Specifically, we captured individuals in native forest fragments and oil palm plantations in the state of Tabasco, Mexico, during two winter seasons (2017–2018, 2018–2019), and compared differences in age and sex ratios, and condition indices between habitats. We found that, when differences occurred, most species exhibited indicators of better habitat quality in native forest (older males with higher body condition indices) when compared to oil palm. Our results suggest that age and sex ratios combined with measures of physiological condition can be used to assess habitat quality for Nearctic-neotropical migratory birds overwintering in modified landscapes. Importantly, determining a species’ territorial behavior is key when selecting a given indicator of habitat quality for each species, and in certain cases, more intensive approaches such as estimates of survival, territory size, and food availability may be needed. Our results suggest that management strategies that promote forest-like conditions in oil palm plantations will improve habitat quality for declining populations of Nearctic-neotropical migratory birds.

Multimodality during live tutoring is relevant for vocal learning in zebra finches

In many songbird species, young birds learn their song from adult conspecifics. Like much animal communication, birdsong is multimodal: singing is accompanied by beak and body movements. We hypothesized that these visual cues could enhance vocal learning thus partly explaining the reduced learning from unimodal audio playbacks compared to multimodal live social tutoring observed in many birdsong studies. To test this, juvenile zebra finches, Taeniopygia guttata, were tutored in a yoked design where replicate tutoring groups of three male–female dyads were exposed to the same live tutor simultaneously in three different ways. (1) Tutees were housed with the tutor in a central compartment; hence they could hear, see and interact with their tutor (‘live’). (2) Tutees placed in one of two adjacent compartments could hear but not see the same tutor from behind a black loudspeaker cloth (‘audio-only’). (3) Tutees could likewise hear the tutor through loudspeaker cloth but could also see the tutor through a one-way mirror (‘audiovisual’). Comparisons of subadult and adult song showed more changes in the audio-only than in the audiovisual or live tutored tutees, suggesting the audio-only group's song development was delayed. According to (blinded) human observer similarity scoring, the audio-only tutees' singing was least similar and the live tutees' singing most similar to their tutor's singing, while the audiovisual tutees showed an intermediate level of similarity, but the between-treatment differences in similarity were not significant. Conversely, the audio-only group showed the highest similarity values with their father's song, which they only heard before the experimental tutoring. Given that the quantity and quality of the tutor song input were the same across treatments within tutoring groups, the results support the hypothesis that visual in addition to auditory exposure to a tutor can affect the timing and possibly also the amount of vocal learning.

Anthropogenic fire patterns affect niche breadth and niche overlap in sympatric songbird species

The severity of wildfires increases globally, and return intervals decrease. Fires can benefit biodiversity, as post-burn early successional stages provide diverse habitats and niches for many species. How fire disturbance affects niche use and niche overlap of species is poorly understood so far. We studied the effect of anthropogenic fire on breeding habitat use, niche breadth and niche overlap of five sympatric bunting species breeding in wetlands of the Amur River floodplain (Russian Far East). Fire frequency, measured as the time an area burnt in the period 2000 to 2017, was mapped from Landsat imagery and related to the presence or absence of the species. Niche breadth and niche overlap were calculated separately for occurrences in burned (within the study year) and unburned patches. Fire frequency characterized differences in niche use among the species, but the probability of presence was not affected by recent fire in four of five species. Niche breadth was significantly lower in recently burned patches, but we found no increase in niche overlap between species after fire. Instead, the studied species seemed to occupy similar patches before and after fire, possibly because of a high site fidelity. Our results clearly show that fire frequency is a major determinant for the niche separation in the five studied species, while recent fire does not affect niche overlap.

An experimental test of chronic traffic noise exposure on parental behaviour and reproduction in zebra finches.

ABSTRACTChronic traffic noise is increasingly recognised as a potential hazard to wildlife. Several songbird species have been shown to breed poorly in traffic noise exposed habitats. However, identifying whether noise is causal in this requires experimental approaches. We tested whether experimental exposure to chronic traffic noise affected parental behaviour and reproductive success in zebra finches (Taeniopygia guttata). In a counterbalanced repeated-measures design, breeding pairs were exposed to continuous playback of one of two types of highway noise previously shown to be either neutral (control) or aversive. Parental nest attendance positively correlated with feeding effort and was higher for the aversive than the control sound and this effect was more pronounced for parents attending larger broods. However, neither noise condition affected offspring number, growth or body mass. The absence of an effect held when we combined our data with data from two other comparable studies into a meta-analysis. We discuss whether the increased nest attendance could be a compensatory strategy that alleviated detrimental noise effects on the chicks, and whether it could be caused by impaired parent-offspring or within-pair communication. Future work should test these hypotheses and investigate potential long-term costs of increased parental engagement.

Weather explains differences in sagebrush-obligate songbird nest success under various grazing regimes

Livestock grazing occurs worldwide, spanning over 25% of land globally, and effective conservation of biodiversity relies upon understanding the interactions of agricultural management practices and increasingly variable weather associated with climate change. We evaluated precipitation and temperature and the daily nest survival rates of two species of sagebrush-obligate songbirds, Brewer’s sparrow ( Spizella breweri ) and sagebrush sparrow ( Artemisiospiza nevadensis ) under dormant season grazing, rotational grazing and a non-grazed control. Precipitation and temperature were quantified as daily time-varying and averages across the breeding season. Both sparrow species in our study were influenced by within-year weather variation, and experienced declines in daily nest survival beyond precipitation thresholds. For sagebrush sparrows, an interaction of precipitation and temperature indicated nest survival was lowest during 5-day time frames with minimal precipitation and high temperatures. While we found moderate grazing lowered perennial grass cover, there was no support for vegetation differences associated with moderate grazing explaining daily nest survival. Our results indicate that variable weather presented a much greater threat to these birds than reductions in herbaceous cover caused by moderate grazing under the studied conditions. Management should focus on conserving extensive tracts of suitable habitat to increase songbird populations and resiliency to increasingly variable and extreme weather conditions. • Sagebrush Sparrow daily nest survival decreased in hotter and drier weather. • Brewer’s Sparrow nest survival was resilient to most weather. • Vegetation was influenced by grazing but did not decrease nest survival. • Weather influenced sparrow nest survival more than grazing regime.

Sex differences in seasonal brain plasticity and the neuroendocrine regulation of vocal behavior in songbirds

Birdsong is controlled in part by a discrete network of interconnected brain nuclei regulated in turn by steroid hormones and environmental stimuli. This complex interaction results in neural changes that occur seasonally as the environment varies (e.g., photoperiod, food/water availability, etc.). Variation in environment, vocal behavior, and neuroendocrine control has been primarily studied in male songbirds in both laboratory studies of captive birds and field studies of wild caught birds. The bias toward studying seasonality in the neuroendocrine regulation of song in male birds comes from a historic focus on sexually selected male behaviors. In fact, given that male song is often loud and accompanied by somewhat extravagant courtship behaviors, female song has long been overlooked. To compound this bias, the primary model songbird species for studies in the lab, zebra finches (Taeniopygia guttata) and canaries (Serinus canaria), exhibit little or no female song. Therefore, understanding the degree of variation and neuroendocrine control of seasonality in female songbirds is a major gap in our knowledge. In this review, we discuss the importance of studying sex differences in seasonal plasticity and the song control system. Specifically, we discuss sex differences in 1) the neuroanatomy of the song control system, 2) the distribution of receptors for androgens and estrogens and 3) the seasonal neuroplasticity of the hypothalamo-pituitary-gonadal axis as well as in the neural and cellular mechanisms mediating song system changes. We also discuss how these neuroendocrine mechanisms drive sex differences in seasonal behavior. Finally, we highlight specific gaps in our knowledge and suggest experiments critical for filling these gaps.

Nest architecture is linked with ecological success in songbirds

Nests are essential constructions that determine fitness, yet their structure can vary substantially across bird species. While there is evidence supporting a link between nest architecture and the habitat a species occupies, we still ignore what ecological and evolutionary processes are linked to different nest types. Using information on 3175 species of songbirds, we show that—after controlling for latitude and body size—species that build domed nests (i.e. nests with a roof) have smaller ranges, are less likely to colonise urban environments and have potentially higher extinction rates compared to species with open and cavity nests. Domed nests could be a costly specialisation, and we show that these nests take more time to be built, which could restrict breeding opportunities. These diverse strands of evidence suggest that the transition from domed to open nests in passerines could represent an important evolutionary innovation behind the success of the largest bird radiation.

Durations of preparatory motor activity in the avian basal ganglia for songs and calls in a species of songbirds

Male songbirds are highly motivated to sing undirected song (US) as juveniles during song learning, and as adults. Given that singing US is a self-driven, elaborated behavior, we would expect to see preparatory activity in the striatal area prior to vocalization, and this preparatory activity could have different characteristics compared to activity driven by calls. In general, songs are longer, complex and influenced by learning while calls are shorter, simpler, and less influenced by experience. The present study recorded neural activity in Area X, a nucleus of the basal ganglia, in male Java sparrows (Lonchura oryzivora) in a sound-proof box and analyzed differences in activity change before US and trill-calls. Trill-calls were often emitted in social arousal, but occasionally emitted when alone. We saw a gradual increase in firing rate for about 2.3 s prior to the onset of US, and a shorter increase of about 1.3 s in firing rate prior to the onset of trill-calls. The results reveal that initiating US may be influenced by a prolonged and specific activity increase in the extent that is not seen with trill-calls. Results suggest that direct or indirect projections to Area X, which may reflect motivational state, could be the cause of this activity change.

Habitat management for stopover and breeding songbird communities along rights-of-way in forest-dominated landscapes.

The proliferation of energy rights-of-way (pipelines and powerlines; ROWs) in the central Appalachian region has prompted wildlife management agencies to consider ways to use these features to manage and conserve at-risk songbird species. However, little empirical evidence exists regarding best management strategies to enhance habitat surrounding ROWs for the songbird community during stopover or breeding periods. We used a before-after-control-impact design to study cut-back border (linear tree cuttings along abrupt forest edges) harvest width (15, 30, and 45 m wide into the forest), and harvest intensity (14 and 4.5m2 /ha basal area retention) prescriptions along ROWs and assessed their effects on mature forest and young forest songbird species and avian guilds (forest gap habitat, forest interior habitat, young forest habitat, and species of regional conservation priority) up to 2 years after treatment throughout West Virginia. Species richness during the spring stopover period initially decreased at the 1-year post-treatment period but returned to pre-treatment levels by 2 years post-treatment. Breeding season responses to cut-back border treatments varied across harvest width, harvest intensity, and time, but all responses of focal species abundance and guild richness were neutral or positive. Cut-back border harvest intensity had a stronger influence (i.e., more positive responses) than harvest width on breeding focal species abundances and guild richness. For harvest intensity, the more intense, 4.5m2 /ha retention treatment had a stronger influence (i.e., more positive responses) than the less intense, 14 m2 /ha retention treatment. For harvest width, the narrowest treatment (15-m wide) had the strongest influence (i.e., more positive responses) of all width treatments, followed by the widest (45-m wide treatment) with the least influence from the 30-m wide treatment. Abundances and richness increased from pre-treatment to 2 years post-treatment across all species and guilds that exhibited a response. These results suggest that cut-back borders increase breeding season habitat suitability along ROWs for the mature forest and young forest songbird community as well as for species of regional conservation priority in the short-term. These findings can aid the development of management guidelines for the forest songbird community along abrupt forest edges of man-made habitat features in forest-dominated landscapes.

INNOVATIVE APPROACHES IN THE FORMATION OF COMPOUND FEED RECIPES FOR DECORATIVE BIRDS AND SINGING BIRDS AND TECHNOLOGY OF COMPOUND FEED PRODUCTION FOR THEM

The share of compound feeds for unproductive pets in the compound feed markets of the world is growingevery year. In Europe, decorative and songbird birds are the third largest pet population (cats and dogs being numbersone and two, pectively), according to FEDIAF data, with 51.87 million decorative birds in all of Europe (37.23 millionof those in the European Union) in 2019.Decorative and songbirds need complete feeding to maintain life and health. Today, owners of decorative andsongbirds have a wide range of ready-made food, which allows them to make the right choice of appropriate feedingregime for their pets. Analyzing the market of feed for decorative and songbirds, we saw that a significant part of it isimported feed, while the range of domestic feed in the Ukrainian market is very small and does not always meet marketrequirements and can not compete. However, the presented compound feeds can hardly be called complete, as they aremainly different types of feed mixtures, which include, depending on the price category, different types of components:from cereals and ending with different nuts and dried fruits.Compound feed should contain all the components necessary for energy production, growth, tissueregeneration, as well as to regulate metabolism. Complete feed for decorative and songbirds must contain a certainamount of all nutrients and biologically active substances. Factors such as age, general health, breeding season,growth, molting, housing conditions and even the season should also be considered.To date, there are a number of issues that need to improve our knowledge of the nutrient and biologicallyactive needs of each species of decorative and songbird, including the characteristics of feed materials, the amount ofenergy, digestibility of feed and the content of nutrients and biologically active substances.In this regard, it is necessary to study each class of nutrients and biologically active substances and features ofthe formation of compound feed recipes, taking into account the need for decorative and songbirds. To study in detailthe functional purpose of nutrients and biologically active substances, symptoms that occur in the body of decorativeand songbirds in their absence or excess in the feed, as well as their sources and minimum needs of birds duringreproduction, growth and maintenance of healthy birds.To meet the forage needs of decorative and songbirds when kept in captivity, one of the most effective methodsis to create complete feed by using innovative technologies (for example, in the form of crumbs or a blend of crumbsobtained by extrusion). This will provide an opportunity to meet both the behavioral and feeding needs of birds.

Induction of an immortalized songbird cell line allows for gene characterization and knockout by CRISPR-Cas9

The zebra finch is one of the most commonly studied songbirds in biology, particularly in genomics, neuroscience and vocal communication. However, this species lacks a robust cell line for molecular biology research and reagent optimization. We generated a cell line, designated CFS414, from zebra finch embryonic fibroblasts using the SV40 large and small T antigens. This cell line demonstrates an improvement over previous songbird cell lines through continuous and density-independent growth, allowing for indefinite culture and monoclonal line derivation. Cytogenetic, genomic, and transcriptomic profiling established the provenance of this cell line and identified the expression of genes relevant to ongoing songbird research. Using this cell line, we disrupted endogenous gene sequences using S.aureus Cas9 and confirmed a stress-dependent localization response of a song system specialized gene, SAP30L. The utility of CFS414 cells enhances the comprehensive molecular potential of the zebra finch and validates cell immortalization strategies in a songbird species.

Auditory and sexual preferences for a father’s song can co-emerge in female Bengalese finches

Birdsong is an important communication signal used in mate choice. In some songbird species, only the males produce songs. While the females of those species do not sing, they are sensitive to inter- and intra-species song variations, and the song preferences of females depend on their developmental experiences and/or genetic predispositions. For example, in Bengalese finches and zebra finches, adult females prefer the song to which they were exposed early in life, such as the father's song. In the current study, we aimed to test whether the preference for the father's song, as reported in previous Bengalese finch studies, can be interpreted as a mating preference. For this purpose, the subjects were raised exclusively with their family until they became sexually mature and then tested as adults. We measured copulation solicitation displays during playbacks of the father's song vs. unfamiliar conspecific songs and found that across individuals, the father's song elicited more displays than other songs. In addition, we analyzed if a bird's response to a given song could be predicted by the level of similarity of that song to the father's song. Although the birds expressed more displays to songs with greater similarity to the father's song, the effect was not statistically significant. These results suggest that female Bengalese finches can develop a strong mating preference for the father's song if they are exclusively exposed to the father's song early in life. However, it is not clear if such a preference generalizes to other cases in which birds are exposed to multiple male songs during development. In order to fully elucidate the possible contribution of experience and genetic factors in the development of female song preference in this species, future studies will need more detailed manipulation and control of the rearing conditions, including cross-fostering.

Fat Stores and Antioxidant Capacity Affect Stopover Decisions in Three of Four Species of Migratory Passerines With Different Migration Strategies: An Experimental Approach

During migratory stopovers, birds must make decisions about when and where to travel and these decisions are likely contingent on their fuel stores, food availability, and antioxidant capacity as well as seasonal changes in key environmental factors. We conducted a field experiment on an offshore stopover site (Block Island, Rhode Island, United States: 41°130N, 71°330W) during autumn migration to test the hypothesis that birds with greater fuel stores and non-enzymatic antioxidant capacity have shorter stopovers than lean birds with low antioxidant capacity, and to determine the extent to which this depends on migration strategy. We used a 2 × 2 factorial field experiment (two levels each of available food and dietary polyphenols) with four species of songbirds kept in captivity for 3–5 days to produce experimental groups with different fuel stores and antioxidant capacity. We attached digital VHF transmitters to assess stopover duration and departure direction using automated telemetry. Non-enzymatic antioxidant capacity increased during refueling for Red-eyed Vireos (Vireo olivaceus) and Blackpoll Warblers (Setophaga striata) fedad libdiets, and forad libfed Hermit Thrushes (Catharus guttatus) supplemented with polyphenols, but not for Yellow-rumped Warblers (Setophaga coronata coronata). Glutathione peroxidase (GPx) decreased during captivity and was influenced by dietary treatment only in Red-eyed Vireos. Oxidative damage decreased during captivity for all species except Yellow-rumped Warblers. Stopover duration was shorter for Vireos and Blackpolls fedad libas compared to those fed maintenance.Ad libfed Hermit Thrushes supplemented with polyphenols had shorter stopovers than those fedad lib, as did thrushes fed at maintenance and supplemented with polyphenols compared with those fed at maintenance alone. There was no influence of condition on stopover duration for Yellow-rumped Warblers. Departure direction was not strongly related to condition, and birds primarily reoriented north when departing Block Island. Thus, fat stores and oxidative status interacted to influence the time passerines spent on stopover, and condition-dependent departure decisions were related to a bird’s migration strategy. Therefore, seasonal variation in macro- and micro-nutrient resources available for refueling at stopover sites can affect body condition and antioxidant capacity and in turn influence the timing and success of migration.

Proximate and evolutionary sources of variation in offspring energy expenditure in songbirds

AbstractAimUnderstanding variation in offspring energy expenditure is important because energy is critical for growth and development. Weather may exert proximate effects on offspring energy expenditure, but in altricial species these might be masked by parental care and huddling with siblings. Such effects are particularly important to understand given changing global weather patterns, yet studies of wild offspring in the presence of parental care are lacking. Offspring energy expenditure may also vary among species due to evolved responses to environmental selection pressures, requiring studies at both proximate and ultimate levels.LocationUSA, South Africa, Malaysia.Time period2016–2019.Major taxa studiedSongbirds.MethodsWe used the doubly‐labelled water technique to estimate nestling daily energy expenditure of 54 songbird species across three continents. We used Bayesian phylogenetic mixed models to test proximate and evolutionary causes of variation in offspring energy expenditure while accounting for phylogeny and phylogenetic uncertainty.ResultsOffspring energy expenditure increased with more rainfall and colder air temperatures, but decreased among offspring in broods with more siblings. Across species, nestling and adult mortality, but not growth rate, were positively associated with offspring energy use.Main conclusionsWeather had clear proximate effects on offspring energy expenditure and parents were either unable or unwilling to fully offset these effects. However, the decrease in offspring energy use when huddling with more siblings demonstrated a modulating effect of life history traits. For example, high nest predation rates favour reduced parental care and can force offspring to spend more energy coping with environmental conditions. Furthermore, reduced energy expenditure is thought to facilitate increased longevity, which is increasingly realized with lower extrinsic mortality rates, providing an explanation for the positive association between adult mortality and offspring energy expenditure. Ultimately, both proximate and evolutionary influences need to be considered to better understand causes of offspring energetics.

Unravelling the Stability of Nightingale Song Over Time and Space Using Open, Citizen Science and Shared Data

Open science approaches enable and facilitate the investigation of many scientific questions in bioacoustics, such as studies on the temporal and spatial evolution of song, as in vocal dialects. In contrast to previous dialect studies, which mostly focused on songbird species with a small repertoire, here we studied the common nightingale (Luscinia megarhynchos), a bird species with a complex and large repertoire. To study dialects on the population level in this species, we used recordings from four datasets: an open museum archive, a citizen science platform, a citizen science project, and shared recordings from academic researchers. We conducted the to date largest temporal and geographic dialect study of birdsong including recordings from 1930 to 2019 and from 13 European countries, with a geographical coverage of 2,652 km of linear distance. To examine temporal stability and spatial dialects, a catalog of 1,868 song types of common nightingales was created. Instead of dialects, we found a high degree of stability over time and space in both, the sub-categories of song and in the occurrence of song types. For example, the second most common song type in our datasets occurred over nine decades and across Europe. In our case study, open and citizen science data proved to be equivalent, and in some cases even better, than data shared by an academic research group. Based on our results, we conclude that the combination of diverse and open datasets was particularly useful to study the evolution of song in a bird species with a large repertoire.

A Scaling Approach to Understand the Dynamics of Fat and Lean Mass in Refueling Migrant Songbirds Measured by Quantitative Magnetic Resonance

Fat contributes most of the energy for migratory flight of birds, whereas lean body tissues (muscles and organs) contribute amino acids and water to maintain metabolic and osmotic homeostasis. During refueling at stopover sites, both fat and lean mass are recovered, but the dynamics of this recovery are poorly understood. We used non-invasive quantitative magnetic resonance (QMR) analysis to measure fat and lean mass of > 3,500 individuals of 25 songbird species during six spring and three autumn migration seasons between 2009 and 2019 at Long Point, ON, Canada. We used allometric scaling analysis and linear mixed-effects modeling of body composition data at both the population level (single capture) and the individual level (recapture). In the population-level analysis, lean mass scaled hypoallometrically with body mass, such that for every 20% increase in body mass, lean mass was predicted to increase by 12.1% in spring and 12.8% in autumn. Fat scaled hyperallometrically with body mass, such that for every 20% increase in body mass, fat mass was predicted to increase by 144% in spring and 136% in autumn. At the individual level, these allometric relationships were more extreme. As a result of this differential allometry, at low body masses, lean and fat mass contributes nearly equally to changes in mass, but at high body mass fat deposition becomes progressively more dominant. Spring migrants deposited relatively more fat than autumn migrants, and in autumn juvenile birds tended to have greater lean mass than adults. Our findings show that lean mass deposition during refueling by songbirds is substantial, and in line with the losses of protein expected in flight. The process of fat and lean mass deposition is characterized by non-linear dynamics which are influenced by the current body composition, season, and, to a lesser extent, age. The patterns suggest that the need for dietary protein to rebuild lean mass will be greater when body mass is low, during autumn migration, and in juvenile birds.

Automated annotation of birdsong with a neural network that segments spectrograms

Songbirds provide a powerful model system for studying sensory-motor learning. However, many analyses of birdsong require time-consuming, manual annotation of its elements, called syllables. Automated methods for annotation have been proposed, but these methods assume that audio can be cleanly segmented into syllables, or they require carefully tuning multiple statistical models. Here, we present TweetyNet: a single neural network model that learns how to segment spectrograms of birdsong into annotated syllables. We show that TweetyNet mitigates limitations of methods that rely on segmented audio. We also show that TweetyNet performs well across multiple individuals from two species of songbirds, Bengalese finches and canaries. Lastly, we demonstrate that using TweetyNet we can accurately annotate very large datasets containing multiple days of song, and that these predicted annotations replicate key findings from behavioral studies. In addition, we provide open-source software to assist other researchers, and a large dataset of annotated canary song that can serve as a benchmark. We conclude that TweetyNet makes it possible to address a wide range of new questions about birdsong.