Northwest South America Research Articles

A total evidence approach to understanding phylogenetic relationships and ecological diversity in Selaginella subg. Tetragonostachys

Several members of Selaginella are renowned for their ability to survive extreme drought and "resurrect" when conditions improve. Many of these belong to subgenus Tetragonostachys, a group of ∼45 species primarily found in North and Central America, with substantial diversity in the Sonoran and Chihuahuan Deserts. We evaluated the monophyly and the age of subgenus Tetragonostachys and assess how drought tolerance contributed to the evolution of this clade. Our study included most Tetragonostachys species, using plastid and nuclear sequences, fossil and herbarium records, and climate variables to describe the species diversity, phylogenetic relationships, divergence times, and climatic niche evolution in the subgenus. We found that subgenus Tetragonostachys forms a monophyletic group sister to Selaginella lepidophylla and may have diverged from other Selaginella because of a Gondwanan-Laurasian vicariance event ca. 240 mya. The North American radiation of Tetragonostachys appears to be much more recent and to have occurred during the Early Cretaceous-late Paleocene interval. We identified two significant and nested ecological niche shifts during the evolution of Tetragonostachys associated with extreme drought tolerance and a more recent shift to cold climates. Our analyses suggest that drought tolerance evolved in the warm deserts of southwest North America and may have been advantageous for colonization of cold and dry boreal climates. Our investigation provides a foundation for future research addressing the genomics of ecological niche evolution and the potential role of reticulate evolution in Selaginella subgenus Tetragonostachys.

Continuous GPS Network Operating Throughout Ecuador

Recent devastating great earthquakes in Sumatra, Chile, and Japan show that scientists need to learn more about other less studied subduction zones that have also generated major earthquakes in the recent past. On the margin of northwest South America, offshore Ecuador and Colombia, the Nazca plate's rapid oblique subduction beneath the South American continent has produced a sequence of large earthquakes. A recently installed continuous GPS network is beginning to help scientists learn more about the geodynamic framework in Ecuador.

Resource assurance predicts specialist and generalist bee activity in drought

Many short-lived desert organisms remain in diapause during drought. Theoretically, the cues desert species use to continue diapause through drought should differ depending on the availability of critical resources, but the unpredictability and infrequent occurrence of climate extremes and reduced insect activity during such events make empirical tests of this prediction difficult. An intensive study of a diverse bee-plant community through a drought event found that bee specialists of a drought-sensitive host plant were absent in the drought year in contrast to generalist bees and to specialist bees of a drought-insensitive host plant. Different responses of bee species to drought indicate that the diapause cues used by bee species allow them to reliably predict host availability. Species composition of the bee community in drought shifted towards mostly generalist species. However, we predict that more frequent and extended drought, predicted by climate change models for southwest North America, will result in bee communities that are species-poor and dominated by specialist species, as found today in the most arid desert region of North America.

A Global Assessment of Long-Term Greening and Browning Trends in Pasture Lands Using the GIMMS LAI3g Dataset

Pasture ecosystems may be particularly vulnerable to land degradation due to the high risk of human disturbance (e.g., overgrazing, burning, etc.), especially when compared with natural ecosystems (non-pasture, non-cultivated) where direct human impacts are minimal. Using maximum annual leaf area index (LAImax) as a proxy for standing biomass and peak annual aboveground productivity, we analyze greening and browning trends in pasture areas from 1982–2008. Inter-annual variability in pasture productivity is strongly controlled by precipitation (positive correlation) and, to a lesser extent, temperature (negative correlation). Linear temporal trends are significant in 23% of pasture cells, with the vast majority of these areas showing positive LAImax trends. Spatially extensive productivity declines are only found in a few regions, most notably central Asia, southwest North America, and southeast Australia. Statistically removing the influence of precipitation reduces LAImax trends by only 13%, suggesting that precipitation trends are only a minor contributor to long-term greening and browning of pasture lands. No significant global relationship was found between LAImax and pasture intensity, although the magnitude of trends did vary between cells classified as natural versus pasture. In the tropics and Southern Hemisphere, the median rate of greening in pasture cells is significantly higher than for cells dominated by natural vegetation. In the Northern Hemisphere extra-tropics, conversely, greening of natural areas is 2–4 times the magnitude of greening in pasture areas. This analysis presents one of the first global assessments of greening and browning trends in global pasture lands, including a comparison with vegetation trends in regions dominated by natural ecosystems. Our results suggest that degradation of pasture lands is not a globally widespread phenomenon and, consistent with much of the terrestrial biosphere, there have been widespread increases in pasture productivity over the last 30 years.

POSSIBLE EFFECT OF COMPETITION WITH MIGRANTS ON CLUTCH SIZE IN DESERT AND NONDESERT PASSERINES

ABSTRACT Several life history parameters of desert and nondesert (mesic) passerines were compared for five large regions: South Africa, North Africa, southwest North America, Pakistan and northern India, and Australia. Desert and mesic passerines do not differ in their mean body mass, length of incubation and fledging periods, egg size, length of breeding seasons, and number of clutches laid per breeding season. There are certain differences in clutch size between desert and mesic passerines, and these differences are significantly related to the proportion of migrants in each region: the larger the percentage of nonbreeding species, the larger the difference in clutch size between the two forms. These results are interpreted as confirming Ashmole's hypothesis: migrants tend to spend more time in nondesert areas, where they compete with resident passerines, and cause higher mortality there in comparison to desert areas. As a result, during breeding, desert forms face stronger competition from other surviv...

Cryptic genetic and wing pattern diversity in a mimetic Heliconius butterfly.

Despite rampant colour pattern diversity in South America, Heliconius erato exhibits a 'postman' wing pattern throughout most of Central America. We examined genetic variation across the range of H. erato, including dense sampling in Central America, and discovered a deep genetic break, centred on the mountain range that runs through Costa Rica. This break is characterized by a novel mitochondrial lineage, which is nearly fixed in northern Central America, that branches basal to all previously described mitochondrial diversity in the species. Strong genetic differentiation also appears in Z-linked and autosomal markers, and it is further associated with a distinct, but subtle, shift in wing pattern phenotype. Comparison of clines in wing phenotype, mtDNA and nuclear markers indicate they are all centred on the mountains dividing Costa Rica, but that cline width differs among data sets. Phylogeographical analyses, accounting for this new diversity, rewrite our understanding of mimicry evolution in this system. For instance, these results suggest that H. erato originated west of the Andes, perhaps in Central America, and as many as 1 million years before its co-mimic, H. melpomene. Overall our data indicate that neutral genetic markers and colour pattern loci are congruent and converge on the same hypothesis-H. erato originated in northwest South America or Central America with a 'postman' phenotype and then radiated into the wealth of colour patterns present today.

Global Priority Conservation Areas in the Face of 21st Century Climate Change

In an era when global biodiversity is increasingly impacted by rapidly changing climate, efforts to conserve global biodiversity may be compromised if we do not consider the uneven distribution of climate-induced threats. Here, via a novel application of an aggregate Regional Climate Change Index (RCCI) that combines changes in mean annual temperature and precipitation with changes in their interannual variability, we assess multi-dimensional climate changes across the “Global 200” ecoregions – a set of priority ecoregions designed to “achieve the goal of saving a broad diversity of the Earth’s ecosystems” – over the 21st century. Using an ensemble of 62 climate scenarios, our analyses show that, between 1991–2010 and 2081–2100, 96% of the ecoregions considered will be likely (more than 66% probability) to face moderate-to-pronounced climate changes, when compared to the magnitudes of change during the past five decades. Ecoregions at high northern latitudes are projected to experience most pronounced climate change, followed by those in the Mediterranean Basin, Amazon Basin, East Africa, and South Asia. Relatively modest RCCI signals are expected over ecoregions in Northwest South America, West Africa, and Southeast Asia, yet with considerable uncertainties. Although not indicative of climate-change impacts per se, the RCCI-based assessment can help policy-makers gain a quantitative and comprehensive overview of the unevenly distributed climate risks across the G200 ecoregions. Whether due to significant climate change signals or large uncertainties, the ecoregions highlighted in the assessment deserve special attention in more detailed impact assessments to inform effective conservation strategies under future climate change.

Projections of declining surface-water availability for the southwestern United States

Under global warming, arid subtropical regions are expected to get drier and expand polewards. This study uses model simulations to examine changes in hydrological parameters for the southwestern United States. The predictions for 2021–2040 show declines in surface-water availability, resulting in reduced soil moisture and runoff. Global warming driven by rising greenhouse-gas concentrations is expected to cause wet regions of the tropics and mid to high latitudes to get wetter and subtropical dry regions to get drier and expand polewards1,2,3,4. Over southwest North America, models project a steady drop in precipitation minus evapotranspiration, P−E, the net flux of water at the land surface5,6,7, leading to, for example, a decline in Colorado River flow8,9,10,11. This would cause widespread and important social and ecological consequences12,13,14. Here, using new simulations from the Coupled Model Intercomparison Project Five, to be assessed in Intergovernmental Panel on Climate Change Assessment Report Five, we extend previous work by examining changes in P, E, runoff and soil moisture by season and for three different water resource regions. Focusing on the near future, 2021–2040, the new simulations project declines in surface-water availability across the southwest that translate into reduced soil moisture and runoff in California and Nevada, the Colorado River headwaters and Texas.

Open-source archive of active faults for northwest South America

Open-source archive of active faults for northwest South America

Constraints on Neoproterozoic paleogeography and Paleozoic orogenesis from paleomagnetic records of the Bitter Springs Formation, Amadeus Basin, central Australia

The supercontinent Rodinia is hypothesized to have been assembled and positioned in tropical latitudes by the early Neoproterozoic Era. Paleomagnetic data from limestones of Svalbard and basaltic dikes of South China have been interpreted to record rapid changes in paleogeography driven by true polar wander that may have rotated the supercontinent in association with the ∼800 Ma Bitter Springs carbon isotope event. To further constrain early Neoproterozoic paleogeography and to test proposed rapid rotations, we have developed sequence- and chemo-stratigraphically constrained paleomagnetic data from the Bitter Springs Formation of the Amadeus Basin of central Australia. A new paleomagnetic pole for the post–Bitter Springs stage ∼770 Ma Johnny's Creek Member (Bitter Springs Formation) provides a positive test for a long-lived history of Australia and Laurentia in a single supercontinent as its similar position to late Mesoproterozoic north Australia poles reproduces the closure of the Laurentian “Grenville Loop.” This new pole also provides support for the hypothesis that there was significant rotation between north and south+west Australia at the end of the Neoproterozoic as this rotation brings the south+west Australia ∼755 Ma Mundine Well pole into much closer proximity to the north Australia Johnny's Creek pole. Syn–Bitter Springs stage carbonates of the Love's Creek Member of the formation contain a well-behaved remanence held by magnetite. The direction of this remanent magnetization falls on the Cambrian portion of Australia's apparent polar wander path suggesting that the magnetite may have formed authigenically at that time. If primary, the Love's Creek direction is consistent with the true polar wander hypothesis for the Bitter Springs stage, is internally consistent with the relative sea level changes inferred from the formation, and can constrain Australia to a SouthWest North America East AnTarctica (SWEAT) fit. A remanence held by pyrrhotite in carbonates of the Bitter Springs Formation corresponds to the apparent polar wander path of Australia at ∼350 Ma. This component can be used to constrain the history of the Devonian-Carboniferous Alice Springs Orogeny as it demonstrates that regional folding of basinal sediments occurred prior to ∼350 Ma, but that the latest stages of tectonism in the hinterland drove fluids through the sediments that altered redox conditions to favor pyrrhotite precipitation.

Uncertainty assessments of climate change projections over South America

This paper assesses the uncertainties involved in the projections of seasonal temperature and precipitation changes over South America in the twenty-first century. Climate simulations generated by 24 general circulation models are weighted according to the reliability ensemble averaging (REA) approach. The results show that the REA mean temperature change is slightly smaller over South America compared to the simple ensemble mean. Higher reliability in the temperature projections is found over the La Plata basin, and a larger uncertainty range is located in the Amazon. A temperature increase exceeding 2 °C is found to have a very likely (>90 %) probability of occurrence for the entire South American continent in all seasons, and a more likely than not (>50 %) probability of exceeding 4 °C by the end of this century is found over northwest South America, the Amazon Basin, and Northeast Brazil. For precipitation, the projected changes have the same magnitude as the uncertainty range and are comparable to natural variability.

Genus paracoccidioides: Species recognition and biogeographic aspects.

BackgroundParacoccidioidomycosis is a systemic mycosis caused by Paracoccidioides brasiliensis (species S1, PS2, PS3), and Paracoccidioides lutzii. This work aimed to differentiate species within the genus Paracoccidioides, without applying multilocus sequencing, as well as to obtain knowledge of the possible speciation processes.Methodology/Principal FindingsSingle nucleotide polymorphism analysis on GP43, ARF and PRP8 intein genes successfully distinguished isolates into four different species. Morphological evaluation indicated that elongated conidia were observed exclusively in P. lutzii isolates, while all other species (S1, PS2 and PS3) were indistinguishable.To evaluate the biogeographic events that led to the current geographic distribution of Paracoccidioides species and their sister species, Nested Clade and Likelihood Analysis of Geographic Range Evolution (LAGRANGE) analyses were applied. The radiation of Paracoccidioides started in northwest South America, around 11–32 million years ago, as calculated on the basis of ARF substitution rate, in the BEAST program. Vicariance was responsible for the divergence among S1, PS2 and P. lutzii and a recent dispersal generated the PS3 species, restricted to Colombia. Taking into account the ancestral areas revealed by the LAGRANGE analysis and the major geographic distribution of L. loboi in the Amazon basin, a region strongly affected by the Andes uplift and marine incursions in the Cenozoic era, we also speculate about the effect of these geological events on the vicariance between Paracoccidioides and L. loboi.Conclusions/SignificanceThe use of at least 3 SNPs, but not morphological criteria, as markers allows us to distinguish among the four cryptic species of the genus Paracoccidioides. The work also presents a biogeographic study speculating on how these species might have diverged in South America, thus contributing to elucidating evolutionary aspects of the genus Paracoccidioides.

The initial human settlement of Northwest South America during the Pleistocene/Holocene transition: Synthesis and perspectives

The northwestern corner of South America, represented by the current territory of Colombia, is a key region to assess some relevant issues linked with the initial human peopling of the area, including population dispersals, cultural diversity, and early adaptations to the changing environmental conditions experienced by lowland and highland north-Andean Neotropical ecosystems at the Pleistocene/Holocene transition. The aim of this paper is to present a synthesis of the archaeological research about early peopling carried out in Northwest South America during the last four decades. Specifically, it will focus on the adaptive strategies and the cultural diversity patterns exhibited by the early hunter-gatherer groups that entered the region since late Pleistocene times. The classic ideas about the time of arrival of the first settlers, the dispersal routes, the incidence of the climate change in on the rate of dispersal and colonization of different habitats, and the role of the megafauna in the subsistence will be reviewed, prior to the formulation of new hypotheses about the meaning of the apparent intraregional diversity of the archaeological record and the evolution of economic strategies over time.

Transforming Siberia along the Laurussian margin

Paleozoic rotation of the Siberian craton along transform faults on the western Laurussian margin is a hypothesis that incorporates geologic and paleomagnetic evidence. The hypothesis could ultimately explain the origins of allochthonous Paleozoic terranes in the western North American Cordillera and northeast Russia, and supports a Precambrian connection of the Siberian craton to southwest North America. The hypothesized rotation may have opened a marginal sea leading to deposition of nearly identical early Paleozoic shelf sequences on the conjugate Cordilleran and Verkhoyansk margins. The model proposes that tectonic shearing transferred a series of terranes from Laurussia to the Siberian plate. The transforms evolved into convergent boundaries in the middle and late Paleozoic. The displaced terranes were ultimately accreted into the Cordillera and orogenic belts in northeast Russia.

Landsat 4 Thematic Mapper Calibration Update

The Landsat 4 Thematic Mapper (TM) collected imagery of the Earth's surface from 1982 to 1993. Although largely overshadowed by Landsat 5 which was launched in 1984, Landsat 4 TM imagery extends the TM-based record of the Earth back to 1982 and also substantially supplements the image archive collected by Landsat 5. To provide a consistent calibration record for the TM instruments, Landsat 4 TM was cross-calibrated to Landsat 5 using nearly simultaneous overpass imagery of pseudo-invariant calibration sites (PICS) in the time period of 1988-1990. To determine if the radiometric gain of Landsat 4 had changed over its lifetime, time series from two PICS locations (a Saharan site known as Libya 4 and a site in southwest North America, commonly referred to as the Sonoran Desert site) were developed. The results indicated that Landsat 4 had been very stable over its lifetime, with no discernible degradation in sensor performance in all reflective bands except band 1. In contrast, band 1 exhibited a 12% decay in responsivity over the lifetime of the instrument. Results from this paper have been implemented at USGS EROS, which enables users of Landsat TM data sets to obtain consistently calibrated data from Landsat 4 and 5 TM as well as Landsat 7 ETM+ instruments.

Greenhouse warming and the 21st century hydroclimate of southwestern North America.

Climate models robustly predict that the climate of southwestern North America, defined as the area from the western Great Plains to the Pacific Ocean and from the Oregon border to southern Mexico, will dry throughout the current century as a consequence of rising greenhouse gases. This regional drying is part of a general drying of the subtropics and poleward expansion of the subtropical dry zones. Through an analysis of 15 coupled climate models it is shown here that the drying is driven by a reduction of winter season precipitation associated with increased moisture divergence by the mean flow and reduced moisture convergence by transient eddies. Due to the presence of large amplitude decadal variations of presumed natural origin, observations to date cannot confirm that this transition to a drier climate is already underway, but it is anticipated that the anthropogenic drying will reach the amplitude of natural decadal variability by midcentury. In addition to this drop in total precipitation, warming is already causing a decline in mountain snow mass and an advance in the timing of spring snow melt disrupting the natural water storage systems that are part of the region's water supply system. Uncertainties in how radiative forcing will impact the tropical Pacific climate system create uncertainties in the amplitude of drying in southwest North America with a La Niña-like response creating a worst case scenario of greater drying.

A 1,200-year perspective of 21st century drought in southwestern North America

A key feature of anticipated 21st century droughts in Southwest North America is the concurrence of elevated temperatures and increased aridity. Instrumental records and paleoclimatic evidence for past prolonged drought in the Southwest that coincide with elevated temperatures can be assessed to provide insights on temperature-drought relations and to develop worst-case scenarios for the future. In particular, during the medieval period, ∼AD 900-1300, the Northern Hemisphere experienced temperatures warmer than all but the most recent decades. Paleoclimatic and model data indicate increased temperatures in western North America of approximately 1 °C over the long-term mean. This was a period of extensive and persistent aridity over western North America. Paleoclimatic evidence suggests drought in the mid-12th century far exceeded the severity, duration, and extent of subsequent droughts. The driest decade of this drought was anomalously warm, though not as warm as the late 20th and early 21st centuries. The convergence of prolonged warming and arid conditions suggests the mid-12th century may serve as a conservative analogue for severe droughts that might occur in the future. The severity, extent, and persistence of the 12th century drought that occurred under natural climate variability, have important implications for water resource management. The causes of past and future drought will not be identical but warm droughts, inferred from paleoclimatic records, demonstrate the plausibility of extensive, severe droughts, provide a long-term perspective on the ongoing drought conditions in the Southwest, and suggest the need for regional sustainability planning for the future.

Influence of Atlantic sea surface temperatures on persistent drought in North America

This study investigates the relationship between North Atlantic sea surface temperatures (SST) and persistent drought in North America using modern observations, proxy paleo-data, and simulations from multiple climate models. The observational results show that persistent droughts in the Great Plains and the southwest North America are closely related to multidecadal variations of North Atlantic SST (Atlantic Multidecadal Oscillations, AMO). During the AMO warm (cold) phases, most of North America is dry (wet). This relationship is persistent since at least 1567 AD, as based on proxy SST for the North Atlantic and the reconstructed drought index for North America. On centennial timescales, proxy SST records from the North Atlantic and proxy drought records for North America suggest that major periods of AMO-like warm (cold) SST anomalies during the last 7.0 ka correspond to dry (wet) conditions in the Great Plains. The influence of North Atlantic SST on North American droughts is examined using simulations made by five global climate models. When forced by warm North Atlantic SST anomalies, all models captured significant drying over North America, despite some regional differences. Specifically, dry summers in the Great Plains and the southwest North America are simulated by all models. The precipitation response to a cold North Atlantic is much weaker and contains greater disagreement among the models. Overall, the ensemble of the five models could well reproduce the statistical relationship between the dry/wet fluctuations in the North America and North Atlantic SST anomalies. Our results suggest that North Atlantic SSTs are likely a major driver of decadal and centennial timescale circulation, including droughts, in North America. Possible mechanisms that connect North Atlantic SST with North American drought, as well as interactions between North Atlantic and tropical Pacific SST and their relative roles on drought are also discussed.

American Indian Prehistory as Written in the Mitochondrial DNA: A Review

Native Americans have been divided into three linguistic groups: the reasonably well-defined Eskaleut and Nadene of northern North America and the highly heterogeneous Amerind of North, Central, and South America. The heterogeneity of the Amerinds has been proposed to be the result of either multiple independent migrations or a single ancient migration with extensive in situ radiation. To investigate the origin and interrelationship of the American Indians, we examined the mitochondrial DNA (mtDNA) variation in 87 Amerinds (Pima, Maya, and Ticuna of North, Central, and South America, respectively), 80 Nadene (Dogrib and Tlingit of northwest North America and Navajo of the southwest North America), and 153 Asians from 7 diverse populations. American Indian mtDNAs were found to be directly descended from five founding Asian mtDNAs and to cluster into four lineages, each characterized by a different rare Asian mtDNA marker. Lineage A is defined by a HaeIII site gain at np 663, lineage B by a 9-bp deletion between the COII and tRNA(Lys) genes, lineage C by a HincII site loss at np 13259, and lineage D by an AluI site loss at np 5176. The North, Central, and South America Amerinds were found to harbor all four lineages, demonstrating that the Amerinds originated from a common ancestral genetic stock. The genetic variation of three of the four Amerind lineages (A, C, and D) was similar with a mean value of 0.084%, whereas the sequence variation in the fourth lineage (B) was much lower, raising the possibility of an independent arrival. By contrast, the Nadene mtDNAs were predominantly from lineage A, with 27% of them having a Nadene-specific RsaI site loss at np 16329. The accumulated Nadene variation was only 0.021%. These results demonstrate that the Amerind mtDNAs arose from one or maybe two Asian migrations that were distinct from the migration of the Nadene and that the Amerind populations are about four times older than the Nadene.

American Indian Prehistory as Written in the Mitochondrial DNA: A Review

Native Americans have been divided into three linguistic groups: the reasonably well-defined Eskaleut and Nadene of northern North America and the highly heterogeneous Amerind of North, Central, and South America. The heterogeneity of the Amerinds has been proposed to be the result of either multiple independent migrations or a single ancient migration with extensive in situ radiation. To investigate the origin and interrelationship of the American Indians, we examined the mitochondrial DNA (mtDNA) variation in 87 Amerinds (Pima, Maya, and Ticuna of North, Central, and South America, respectively), 80 Nadene (Dogrib and Tlingit of northwest North America and Navajo of the southwest North America), and 153 Asians from 7 diverse populations. American Indian mtDNAs were found to be directly descended from five founding Asian mtDNAs and to cluster into four lineages, each characterized by a different rare Asian mtDNA marker. Lineage A is defined by a HaeIII site gain at np 663, lineage B by a 9-bp deletion between the COII and tRNALys genes, lineage C by a HincII site loss at np 13259, and lineage D by an AluI site loss at np 5176. The North, Central, and South America Amerinds were found to harbor all four lineages, demonstrating that the Amerinds originated from a common ancestral genetic stock. The genetic variation of three of the four Amerind lineages (A, C, and D) was similar with a mean value of 0.084%, whereas the sequence variation in the fourth lineage (B) was much lower, raising the possibility of an independent arrival. By contrast, the Nadene mtDNAs were predominantly from lineage A, with 27% of them having a Nadene-specific RsaI site loss at np 16329. The accumulated Nadene variation was only 0.021%. These results demonstrate that the Amerind mtDNAs arose from one or maybe two Asian migrations that were distinct from the migration of the Nadene and that the Amerind populations are about four times older than the Nadene.