Solid-state NMR Measurements Research Articles

Structural changes of Natronomonas pharaonis halorhodopsin in its late photocycle revealed by solid-state NMR spectroscopy

Natronomonas pharaonis halorhodopsin (NpHR) is a light-driven Cl− inward pump that is widely used as an optogenetic tool. Although NpHR is previously extensively studied, its Cl− uptake process is not well understood from the protein structure perspective, mainly because in crystalline lattice, it has been difficult to analyze the structural changes associated with the Cl− uptake process. In this study, we used solid-state NMR to analyze NpHR both in the Cl−-bound and -free states under near-physiological transmembrane condition. Chemical shift perturbation analysis suggested that while the structural change caused by the Cl− depletion is widespread over the NpHR molecule, residues in the extracellular (EC) part of helix D exhibited significant conformational changes that may be related to the Cl− uptake process. By combining photochemical analysis and dynamic nuclear polarization (DNP)-enhanced solid-state NMR measurement on NpHR point mutants for the suggested residues, we confirmed their importance in the Cl− uptake process. In particular, we found the mutation at Ala165 position, located at the trimer interface, to an amino acid with bulky sidechain (A165V) significantly perturbs the late photocycle and disrupts its trimeric assembly in the Cl−-free state as well as during the ion-pumping cycle under the photo-irradiated condition. This strongly suggested an outward movement of helix D at EC part, disrupting the trimer integrity. Together with the spectroscopic data and known NpHR crystal structures, we proposed a model that this helix movement is required for creating the Cl− entrance path on the extracellular surface of the protein and is crucial to the Cl− uptake process.

Cooperative β-sheet coassembly controls intermolecular orientation of amphiphilic peptide-polydiacetylene conjugates

In this work, we elucidated the structural organization of stimuli-responsive peptide-polydiacetylene (PDA) conjugates that can self-assemble as 1D nanostructures under neutral aqueous conditions. The amino acid sequences bear positively or negatively charged domains at the periphery of the peptide segments to promote solubility in water while also driving assembly of the individual and combined components into β-sheets. The photopolymerization of PDA, as well as the sensitivity of the resulting optical properties of the polymeric material to external stimuli, highly depends on the structural organization of the assembly of amphiphilic peptide-diacetylene units into 1D-nanostructures. Solid-state NMR measurements on 13C-labeled and 15N-labeled samples show that positively charged and negatively charged peptide amphiphiles are each capable of self-assembly, but self-assembly favors antiparallel β-sheet structure. When positively and negatively charged peptide amphiphiles interact in stoichiometric solutions, cooperative coassembly dominates over self-assembly, resulting in the desired parallel β-sheet structure with a concomitant increase in structural order. These results reveal that rational placement of oppositely charged residues can control β-strand organization in a peptide amphiphile coassembly, which would have implications on the adaptive properties of stimuli-responsive biomaterials such as the peptide-PDAs studied here.

Multicationic Tetrahedra Networks: Alkaline-Earth-Centered Polyhedra and Non-Condensed AlN6-Octahedra in the Imidonitridophosphates AE2AlP8N15(NH) (AE=Ca, Sr, Ba).

A series of isostructural imidonitridophosphates AE2AlP8N15(NH) (AE=Ca, Sr, Ba) was synthesized at high-pressure/high-temperature conditions (1400 °C and 5-9GPa) from alkaline-earth metal nitrides or azides Ca3N2/Sr(N3)2/Ba(N3)2 and the binary nitrides AlN and P3N5. NH4F served as a hydrogen source and mineralizing agent. The crystal structures were determined by single-crystal X-ray diffraction and feature a three-dimensional network of vertex-sharing PN4-tetrahedra forming diverse-sized rings that are occupied by aluminum and alkaline earth ions. These structures represent another example of nitridophosphate-based networks that simultaneously incorporate AlN6-octahedra and alkaline-earth-centered polyhedra, with aluminum not participating in the tetrahedra network. They differ from previously reported ones by incorporating non-condensed octahedra instead of strongly condensed octahedra units and contribute to the diversity of multicationic nitridophosphate network structures. The results are supported by atomic resolution EDX mapping, solid-state NMR and FTIR measurements. Eu2+-doped samples show strong luminescence with narrow emissions in the range of green to blue under UV excitation, marking another instance of Eu2+-luminescence within imidonitridophosphates.

Predicted and Experimental NMR Chemical Shifts at Variable Temperatures: The Effect of Protein Conformational Dynamics.

NMR chemical shifts provide a sensitive probe of protein structure and dynamics but remain challenging to predict and interpret. We examine the effect of protein conformational distributions on 15N chemical shifts for dihydrofolate reductase (DHFR), comparing QM/MM predicted shifts with experimental shifts in solution as well as frozen distributions. Representative snapshots from MD trajectories exhibit variation in predicted 15N chemical shifts of up to 25 ppm. The average over the fluctuations is in significantly better agreement with room temperature solution experimental values than the prediction for any single optimal conformations. Meanwhile, solid-state NMR (SSNMR) measurements of frozen solutions at 105 K exhibit broad lines whose widths agree well with the widths of distributions of predicted shifts for samples from the trajectory. The backbone torsion angle ψi-1 varies over 60° on the picosecond time scale, compensated by φi. These fluctuations can explain much of the shift variation.

Thioxanthone-Based Siloxane Photosensitizer for Cationic/Radical Photopolymerization and Photoinduced Sol-Gel Reactions.

In this investigation, a multifunctional visible-light TX-based photosensitizer containing a siloxane moiety (TXS) was designed with a good overall yield of 54%. The addition of a siloxane moiety enabled the incorporation of a TX photosensitizer into a siloxane network by photoinduced sol-gel chemistry, thus avoiding its release. Both liquid 1H and solid-state 29Si NMR measurements undeniably confirmed the formation of photoacids resulting from the photolysis of the TXS/electron acceptor molecule (Iodonium salt), which promoted the photoinduced hydrolysis/condensation of the trimethoxysilane groups of TXS, with a high degree of condensation of its inorganic network. Notably, the laser flash photolysis, fluorescence, and electron paramagnetic resonance spin-trapping (EPR ST) experiments demonstrated that TXS could react with Iod through an electron transfer reaction through its excited states, leading to the formation of radical initiating species. Interestingly, the TXS/Iod was demonstrated to be an efficient photoinitiating system for free-radical (FRP) and cationic (CP) polymerization under LEDs@385, 405, and 455 nm. In particular, whatever the epoxy monomer mixtures used, remarkable final epoxy conversions were achieved up to 100% under air. In this latter case, we demonstrated that both the photoinduced sol-gel process (hydrolysis of trimethoxysilane groups) and the cationic photopolymerization occurred simultaneously.

Solid-State NMR Revealing the Impact of Polymer Additives on Li-Ion Motions in Plastic-Crystalline Succinonitrile Electrolytes

To enhance the safety of lithium-ion batteries (LIBs), alternatives to liquid electrolytes are widely studied. One of them is the plastic-crystal succinonitrile (SN) which can solvate various Li salts.[1] This system can be further extended by inserting polymers, bringing additional advantages such as higher melting points and the possibility of adjusting thermo-mechanical and electrochemical properties.[2]The plastic-crystalline electrolyte consisting of the Li salt lithium bis(trifluoro-methanesulfonyl)imide (LiTFSI) dissolved in SN was extended by adding various thermoplastic polymers, namely, polyacrylonitrile (PAN), poly(ethylene oxide) (PEO), polyethylene carbonate (PEC), and polyvinylpyrrolidone (PVP). Even small amounts (10 wt %) of added polymer to the SN-base were found to impact the Li-ion mobility. Variable temperature investigations on structure and ion dynamics were performed using static and magic angle spinning (MAS) solid-state NMR and various relaxometry measurements. Influence of the Li-concentration and the polymers’ functional groups on the structure of SN and the resulting Li-ion mobility was elaborated. Activation energies and jump rates of the Li-ions were determined.As a result, the PAN containing system stands out to be a promising candidate for application in future LIBs as it shows high ion mobility, low activation energy, and a high potential for further modifications. Solid-state NMR turned out to be a reliable method and a good alternative to impedance spectroscopy measurements for investigating ion mobility behaviour providing even more information.[3]Literature:[1] S. Long, D. R. MacFarlane, M. Forsyth, Solid State Ionics 2004, 175, 733.[2] N. Voigt, L. van Wüllen, Solid State Ionics 2014, 260, 65.[3] J. Möller, V. van Laack, K. Koschek, P. Bottke, M. Wark, J. Phys. Chem. C 2023, 127, 1464.

Computationally Predicted New Solid-State Electrolyte (Li5+x PS4+x Cl2-x : 0 ≤ x ≤ 2) and Poly Sulfide Cathodes (Li3+y PS9 or Li5+y PS9Cl2: 0 ≤ y ≤ 9) for High Performance Li Metal Anode Batteries

We used Molecular Dynamics (MD) simulations to study the structures and conductivity of sulfide-based ceramics from the superionic conductor argyrodite family for applications as solid-state electrolyte and cathode materials. These studies combined quantum mechanics (QM) and ReaxFF reactive force field based MD, where the ReaxFF parameters were developed from QM MD.[1]Currently Li10GeP2S12 (LGPS) demonstrates one of the highest Li-ion conductivity for solid state electrolyte, 12 mS/cm at 300K, but it is highly reactive with the Li-metal anode, and it is expensive due to the presence of Ge. We studied the Li ion diffusion mechanism and ionic conductivity of the promising Li6(PS4)SCl solid state electrolyte, predicted to have a conductivity of s = 6 mS/cm, close to experiment (4 mS/cm). We find that Li migration in this electrolyte occurs via conjugated substitutional type diffusion involving rearrangements of three (or more) Li-ions and ~ 3 vacant sites in a 3D matrix of anions that are essentially stationary at 298K (over 20 ns of simulation). We carried out 10 ns of MD simulation to predict a Li-ion conductivity for a single phase Li6(PS4)SCl of 5.9 mS/cm in agreement with solid state NMR measurements of 3.9 mS/cm. Our calculated activation energy of 0.24 eV is within experimentally reported range.[2]We report here the computationally predicted structure of Li5PS4Cl2, a new sulfide Li-superionic conductor with the highest Li-ion conductivity at solid state, which we predict to have Li-ion conductivity of 20 mS/cm at 298 K. We also predicted the directional ionic conductivity and Li-migration barrier in it. This Li5PS4Cl2 has not yet been synthesized and studied experimentally.We also report our results on QM and ReaxFF MD for new polysulfide cathodes, Li3+y PS4+n and Li5+y PS4+nCl2 , both based on Li3PS4. Here, n is the number of excess sulfur atoms in the fully charged polysulfide cathode per formula unit with y=0 and y is the excess Li added to the cathode during discharge processes. We evaluated the performance of these cathode electrolyte systems in terms of interfacial stability and discharge voltages.Li3PS4+5 is a potential cathode for lithium-sulfur batteries. We predicted the structures of Li3PS4+5 finding extra S3 and S7 chains attached to one S atom of each PS4 group. This leads to a density of 2.2 g/cm3. As the cathode is discharged, the lithium atoms fill up all the gaps between S atoms, leading to Li3+9 PS4+5, with 1.7 g/cm3. We studied the dynamics of the discharge as lithium ions from the metal move into the material and react with the S-S bonds to make Li2S. Our predicted discharge curve agrees well with the experimental data (Figure 1).[3]We extended these studies to design a new polysulfide cathode Li5PS4+5Cl2 to be used with our newly predicted Li-superionic conductor electrolytes. The interfacial stability of the Solid electrolyte with S-based cathode and with Li-anode were studied (Figure 2).Our work presents a new strategy for designing materials and processes for solid-state batteries using computational screening and chemical substitution. This demonstrates the potential of using lithium PS4 based superionic conductors with PS4 based cathodes for applications in solid-state batteries. We also addresses some of the key challenges in accelerating solid-state battery development, such as phase stability, transport properties, electrode compatibility etc. This work demonstrates how computational studies can guide new avenues for experimental developments to advance of solid-state battery technology for applications ranging from grid storage to electric vehicles.Acknowledgements:We acknowledge the support from Hong Kong Quantum AI Lab, AIR@InnoHK of Hong Kong Government.

A Steric-Repulsion-Driven Clutch Stack of Triaryltriazines: Correlated Molecular Rotations and a Thermoresponsive Gearshift in the Crystalline Solid.

We report that a newly developed type of triaryltriazine rotor, which bears bulky silyl moieties on the para position of its peripheral phenylene groups, forms a columnar stacked clutch structure in the crystalline phase. The phenylene units of the crystalline rotors display two different and interconvertible correlated molecular motions. It is possible to switch between these intermolecular geared rotational motions via a thermally induced crystal-to-crystal phase transition. Variable-temperature solid-state 2H NMR measurements and X-ray diffraction studies revealed that the crystalline rotor is characterized by a vertically stacked columnar structure upon introducing a bulky Si moiety with bent geometry as the stator. The structure exhibits correlated flapping motions via a combination of 85° and ca. 95° rotations between 295 and 348 K, concurrent with a negative entropy change (ΔS‡ = -23 ± 0.3 cal mol-1 K-1). Interestingly, heating the crystal beyond 348 K induces an anisotropic expansion of the column and lowers the steric congestion between the adjacent rotators, thus altering the correlated motions from a flapping motion to a correlated 2-fold 180° rotation with a lower entropic penalty (ΔS‡ = -14 ± 0.5 cal mol-1 K-1). The obtained results of our study suggest that the intermolecular stacking of the C3-symmetric rotator driven by the steric repulsion of the bulky stator represents a promising strategy for producing various correlated molecular motions in the crystalline phase. Moreover, direct and reversible modulation of the intermolecularly correlated rotation is achieved via a thermally induced crystal-to-crystal phase transition, which operates as a gearshift function at the molecular level.

Hydrogen bonding in duplex DNA probed by DNP enhanced solid-state NMR N-H bond length measurements.

Numerous biological processes and mechanisms depend on details of base pairing and hydrogen bonding in DNA. Hydrogen bonds are challenging to quantify by X-ray crystallography and cryo-EM due to difficulty of visualizing hydrogen atom locations but can be probed with site specificity by NMR spectroscopy in solution and the solid state with the latter particularly suited to large, slowly tumbling DNA complexes. Recently, we showed that low-temperature dynamic nuclear polarization (DNP) enhanced solid-state NMR is a valuable tool for distinguishing Hoogsteen base pairs (bps) from canonical Watson-Crick bps in various DNA systems under native-like conditions. Here, using a model 12-mer DNA duplex containing two central adenine-thymine (A-T) bps in either Watson-Crick or Hoogsteen confirmation, we demonstrate DNP solid-state NMR measurements of thymine N3-H3 bond lengths, which are sensitive to details of N-H···N hydrogen bonding and permit hydrogen bonds for the two bp conformers to be systematically compared within the same DNA sequence context. For this DNA duplex, effectively identical TN3-H3 bond lengths of 1.055 ± 0.011Å and 1.060 ± 0.011Å were found for Watson-Crick A-T and Hoogsteen A (syn)-T base pairs, respectively, relative to a reference amide bond length of 1.015 ± 0.010Å determined for N-acetyl-valine under comparable experimental conditions. Considering that prior quantum chemical calculations which account for zero-point motions predict a somewhat longer effective peptide N-H bond length of 1.041Å, in agreement with solution and solid-state NMR studies of peptides and proteins at ambient temperature, to facilitate direct comparisons with these earlier studies TN3-H3 bond lengths for the DNA samples can be readily scaled appropriately to yield 1.083Å and 1.087Å for Watson-Crick A-T and Hoogsteen A (syn)-T bps, respectively, relative to the 1.041Å reference peptide N-H bond length. Remarkably, in the context of the model DNA duplex, these results indicate that there are no significant differences in N-H···N A-T hydrogen bonds between Watson-Crick and Hoogsteen bp conformers. More generally, high precision measurements of N-H bond lengths by low-temperature DNP solid-state NMR based methods are expected to facilitate detailed comparative analysis of hydrogen bonding for a range of DNA complexes and base pairing environments.

One-Year Water-Stable and Porous Bi(III) Halide Semiconductor with Broad-Spectrum Antibacterial Performance.

Hybrid metal halide semiconductors are a unique family of materials with immense potential for numerous applications. For this to materialize, environmental stability and toxicity deficiencies must be simultaneously addressed. We report here a porous, visible light semiconductor, namely, (DHS)Bi2I8 (DHS = [2.2.2] cryptand), which consists of nontoxic, earth-abundant elements, and is water-stable for more than a year. Gas- and vapor-sorption studies revealed that it can selectively and reversibly adsorb H2O and D2O at room temperature (RT) while remaining impervious to N2 and CO2. Solid-state NMR measurements and density functional theory (DFT) calculations verified the incorporation of H2O and D2O in the molecular cages, validating the porous nature. In addition to porosity, the material exhibits broad band-edge light emission centered at 600 nm with a full width at half-maximum (fwhm) of 99 nm, which is maintained after 6 months of immersion in H2O. Moreover, (DHS)Bi2I8 exhibits bacteriocidal action against three Gram-positive and three Gram-negative bacteria, including antibiotic-resistant strains. This performance, coupled with the recorded water stability and porous nature, renders it suitable for a plethora of applications, from solid-state batteries to water purification and disinfection.

Recycling of PFSA-Based Membranes and Their Re-Application in PEM Fuel Cells

The commercialization of PEM fuel cells offers a promising opportunity to overcome our dependence on fossil fuels and provides an attractive alternative for automotive and stationary power applications.[1] However, PEMFCs are still costly in production, with the main cost factor due to the fabrication of the perfluorosulfonic acid (PFSA)-based proton exchange membrane and the noble metal catalysts.[2,3] Recycling of these components could increase the economic attractiveness of PEMFCs. However, while the high resistance of the ionomer membrane to thermal and chemical degradation is favorable for their use in fuel cells, it also makes membrane recycling a major challenge.Here, we present a newly developed recycling strategy to recover PFSA-based membranes after operation by a hydrothermal treatment. Both short side chain (SSC) and long side chain (LSC) ionomers with EWs of 800 and 1000 were investigated. In contrast to previously published methods, we were able to recover the PFSA ionomer by using water instead of high-boiling organic solvents, such as DMF or DMSO.[4,5] The recycled membranes were obtained from the recycled PFSA ionomer solution by doctor-blading. They were investigated by in-situ Raman techniques for studying the water uptake and analyzed by IR and small-angle X-ray scattering (SAXS) techniques to get a more detailed insight into their morphology. In single cell tests at standard (80 °C) and enhanced (up to 130 °C) PEMFC operating temperatures, the recycled membranes showed an increased cell performance as compared to the pristine 3M-800EW membrane. Solid-state NMR measurements confirmed that no chemical changes in the membrane occurred due to the heat-treatment process.We assume that the observed performance boost can be attributed to an increased water uptake and retention. Furthermore, a change in the polymer matrix formation may be responsible for the observed behavior, which led to an expanded water filled channel structure, where water can accumulate to facilitate proton diffusion as H3O+ through the channels. To confirm this assumption, the morphology of the recycled membranes will be investigated by in situ SAXS measurements at different temperatures and degrees of hydration.[1] I. Staffell, D. Scamman, A. Velazquez Abad, P. Balcombe, P. E. Dodds, P. Ekins, N. Shah, K. R. Ward, Energy Environ. Sci. 2019, 12, 463–491.[2] J. Fan, M. Chen, Z. Zhao, Z. Zhang, S. Ye, S. Xu, H. Wang, H. Li, Nat. Energy 2021, 6, 475–486.[3] D. Papageorgopoulos, Fuel Cell R&D Overview. 2019 Annual Merit Review and Peer Evaluation Meeting, 2019.[4] Q. Xu, X. Chen, S. Wang, C. Guo, Y. Niu, R. Zuo, Z. Yang, Y. Zhou, C. Xu, Energies 2022, 15, 8717.[5] H. F. Xu, X. Wang, Z. G. Shao, I. M. Hsing, J. Appl. Electrochem. 2002, 32, 1337–1340.

Torsion Angle Analysis of a Thermally Activated Delayed Fluorescence Emitter in an Amorphous State Using Dynamic Nuclear Polarization Enhanced Solid-State NMR.

The torsion angle between donor and acceptor segments of a thermally activated delayed fluorescence (TADF) molecule is one of the most critical factors in determining the performance of TADF-based organic light-emitting diodes (OLEDs) because the torsion angle affects not only the energy gap between the singlet and triplet but also the oscillator strength and spin-orbit coupling. However, the torsion angle is difficult to analyze, because organic molecules are in an amorphous state in OLEDs. Here, we determined the torsion angle of a highly efficient TADF emitter, DACT-II, in an amorphous state by dynamic nuclear polarization enhanced solid-state NMR measurements. From the experimentally obtained chemical shift principal values of 15N on carbazole, we determined the average torsion angle to be 52°. Such quantification of the torsion angles in TADF molecules in amorphous solids will provide deep insight into the TADF mechanism in amorphous OLEDs.

Facile formation of pollucite in geopolymers: Implications for radioactive Cs immobilization

Pollucite, CsAlSi2O6, is one of the few naturally occurring cesium minerals, and is considered as an efficient phase for long-term immobilization of radioactive cesium. The occlusion of cesium ions within pollucite structure is conventionally achieved via solid state syntheses, requiring temperatures exceeding 1000 °C, or hydrothermal processes which are typically preformed at 200–300 °C and elevated pressures. The current paper reports on the formation of pollucite within Cs-bearing geopolymers at near-ambient temperatures and pressures. By combining data from X-ray powder diffraction and 133Cs solid-state NMR measurements we are able not only to identify the various phases that are formed within crystalline-amorphous geopolymer matrices, but also follow changes in the distribution of cesium between the various phases as a function of geopolymer formulation. Based on these data we were able demonstrate that the extent of pollucite formation increases with the Si2O:Al2O3 ratio in the geopolymer formulation. The formation of crystalline pollucite domains within composite crystalline-amorphous geopolymer matrices may have important implications for the immobilization of radioactive cesium.

Synthesis of N-Unprotected Diaryl Ketimines and Alkyl Ketimines from Ketones and Ammonia Using Porous Solid Acids with Analysis of Their Adsorption Behavior

Abstract The most atom-efficient synthetic method for N-unprotected ketimines (N-H ketimines) from ketones is the dehydration condensation reaction with ammonia (NH3). However, until now, few synthetic methods for N-H ketimines with high versatility have been known. In this study, we examined various solid acids and found that N-H diaryl ketimines with various functional groups on the aryl groups could be synthesized in high yields from diaryl ketones and NH3 under solvent-free conditions using silica-alumina (SiO2-Al2O3) or proton-exchanged Y-type zeolite (H-Y). Solid-state 13C and 15N NMR measurements indicated that the N-H ketimine formed in the pores of acidic zeolite was coordinated to NH4+ species on the pore surface. By quantum chemical calculations we also discussed the reason why the dehydration-condensation reaction between ketone and NH3, which is an endothermic reaction in a vacuum, was biased toward the product side in the actual experiment. In addition, this synthetic method can be applied to synthesize N-H alkyl ketimines with α-acidic hydrogens, which are less stable and more sensitive to hydrolysis and oligomerization than diaryl ketimines.

On the Binding Mode and Molecular Mechanism of Enzymatic Polyethylene Terephthalate Degradation

Enzymatic degradation of polyethylene terephthlate (PET) by polyester hydrolases is currently subject to intensive research, as it is considered as a potential eco-friendly recycling method for plastic waste. However, the substrate-binding mode and the molecular mechanism of enzymatic PET hydrolysis are still under intense investigation, and controversial hypotheses have been presented. To help unravel the inherent mechanism of biocatalytic PET degradation at the atomic level, we performed solid-state NMR measurements of a cutinase from Thermobifida fusca (TfCut2) embedded in trehalose glasses together with chemically synthesized, amorphous 13C(═O)-labeled oligomeric PET. The resulting ternary enzyme-PET-trehalose glassy system enabled advanced solid-state NMR methods for real-time tracking of the enzymatic PET degradation and the investigation of PET chain dynamics. Combined with enhanced-sampling molecular dynamics simulations, specific enzyme–substrate interactions during the degradation process could also be monitored. Our results demonstrate that the PET chain is first cleaved by TfCut2 in blocks of at least one repeat unit and further to terephthalic acid and ethylene glycol. Moreover, the second step (formation of final hydrolysis products) appears to be rate-limiting in such reactions. The observed dynamic changes and interfacial protein contacts of 13C-labeled PET carbonyl groups suggest that only one PET repeat unit is bound to the enzyme during the degradation process while the rest of the PET chain is only loosely confined to the active site. These results, not accessible by using conventional solution enzyme samples and small nonhydrolyzable substrates, provide a better understanding of the biocatalytic PET degradation mechanism of polyester hydrolases.

In-cell 31P solid-state NMR measurements of the lipid dynamics and influence of exogeneous β-amyloid peptides on live neuroblastoma neuro-2a cells

Non-specific disruption of cellular membranes induced by aggregation of exogeneous β-amyloid (Aβ) peptides is considered a viable pathological mechanism in Alzheimer's disease (AD). The solid-state nuclear magnetic resonance (ssNMR) spectroscopy has been widely applied in model liposomes to provide important insights on the molecular interactions between membranes and Aβ aggregates. Yet, the feasibility of in-cell ssNMR spectroscopy to probe Aβ-membrane interactions in native cellular environments has rarely been tested. Here we report the application of in-cell31P ssNMR spectroscopy on live mouse neuroblastoma Neuro-2a (N2a) cells under moderate magic angle spinning (MAS) conditions. Both cell viability and cytoplasmic membrane integrity are retained for up to six hours under 5 kHz MAS frequency at 277 K, which allow applications of direct-polarization 31P spectroscopy and 31P spin-spin (T2) relaxation measurements. The 31P T2 relaxation time constant of N2a cells is significantly increased compared with the model liposome prepared with comparable major phospholipid compositions. With the addition of 5 μM 40-residue Aβ (Aβ1–40) peptides, the 31P T2 relaxation is instantly accelerated. This work demonstrates the feasibility of using in-cell31P ssNMR to investigate the Aβ-membrane interactions in the biologically relevant cellular system.

A putative mechanism for capture of carbon dioxide by quartz, mediated by triboelectric charging

Mechanical activation of quartz grains in a dry atmosphere causes triboelectric charging that can capture CO2 quantitatively (Thøgersen et al., https://doi.org/10.1016/j.cplett.2021.139069). Based on electron structure calculations, we propose a mechanism for this process. According to the mechanism, CO2 is inserted in the quartz lattice to form an anchored CO3 moiety. Predicted 13C chemical shifts of this product agree with solid-state 13C NMR measurements.

Unusual Robustness of Neurotransmitter Vesicle Membranes against Serotonin-Induced Perturbations.

Nature confines hundreds of millimolar of amphiphilic neurotransmitters, such as serotonin, in synaptic vesicles. This appears to be a puzzle, as the mechanical properties of lipid bilayer membranes of individual major polar lipid constituents of synaptic vesicles [phosphatidylcholine (PC), phosphatidylethanolamine (PE), and phosphatidylserine (PS)] are significantly affected by serotonin, sometimes even at few millimolar concentrations. These properties are measured by atomic force microscopy, and their results are corroborated by molecular dynamics simulations. Complementary 2H solid-state NMR measurements also show that the lipid acyl chain order parameters are strongly affected by serotonin. The resolution of the puzzle lies in the remarkably different properties displayed by the mixture of these lipids, at molar ratios mimicking those of natural vesicles (PC:PE:PS:Cholesterol = 3:5:2:5). Bilayers constituting of these lipids are minimally perturbed by serotonin, and show only a graded response at physiological concentrations (>100 mM). Significantly, the cholesterol (up to 33% molar ratio) plays only a minor role in dictating these mechanical perturbations, with PC:PE:PS:Cholesterol = 3:5:2:5 and 3:5:2:0 showing similar perturbations. We infer that nature uses an emergent mechanical property of a specific mixture of lipids, all individually vulnerable to serotonin, to appropriately respond to physiological serotonin levels.

Porous and Water Stable 2D Hybrid Metal Halide with Broad Light Emission and Selective H2 O Vapor Sorption.

In this work we report a strategy for generating porosity in hybrid metal halide materials using molecular cages that serve as both structure-directing agents and counter-cations. Reaction of the [2.2.2] cryptand (DHS) linker with PbII in acidic media gave rise to the first porous and water-stable 2D metal halide semiconductor (DHS)2 Pb5 Br14 . The corresponding material is stable in water for a year, while gas and vapor-sorption studies revealed that it can selectively and reversibly adsorb H2 O and D2 O at room temperature (RT). Solid-state NMR measurements and DFT calculations verified the incorporation of H2 O and D2 O in the organic linker cavities and shed light on their molecular configuration. In addition to porosity, the material exhibits broad light emission centered at 617 nm with a full width at half-maximum (FWHM) of 284 nm (0.96 eV). The recorded water stability is unparalleled for hybrid metal halide and perovskite materials, while the generation of porosity opens new pathways towards unexplored applications (e.g. solid-state batteries) for this class of hybrid semiconductors.

Combined effect of the head groups and alkyl chains of archaea lipids when interacting with bacteriorhodopsin

Bacteriorhodopsin (bR), a transmembrane protein with seven α-helices, is highly expressed in the purple membrane (PM) of archaea such as Halobacterium salinarum. It is well known that bR forms two-dimensional crystals with acidic lipids such as phosphatidylglycerol phosphate methyl ester (PGP-Me)—a major component of PM lipids bearing unique chemical structures—methyl-branched alkyl chains, ether linkages, and divalent anionic head groups with two phosphodiester groups. Therefore, we aimed to determine which functional groups of PGP-Me are essential for the boundary lipids of bR and how these functionalities interact with bR. To this end, we compared various well-known phospholipids (PLs) that carry one of the structural features of PGP-Me, and evaluated the affinity of PLs to bR using the centerband-only analysis of rotor-unsynchronized spin echo (COARSE) method in solid-state NMR measurements and thermal shift assays. The results clearly showed that the branched methyl groups of alkyl chains and double negative charges in the head groups are important for PL interactions with bR. We then examined the effect of phospholipids on the monomer–trimer exchange of bR using circular dichroism (CD) spectra. The results indicated that the divalent negative charge in a head group stabilizes the trimer structure, while the branched methyl chains significantly enhance the PLs' affinity for bR, thus dispersing bR trimers in the PM even at high concentrations. Finally, we investigated the effects of PL on the proton-pumping activity of bR based on the decay rate constant of the M intermediate of a bR photocycle. The findings showed that bR activities decreased to 20% in 1,2-dimyristoyl-sn-glycero-3-phosphate (DMPA), and in 1,2-diphytanoyl-sn-glycero-3-phosphocholine (DPhPC) bilayers as compared to that in PM. Meanwhile, 1,2-Diphytanoyl-sn-glycero-3-phosphate (DPhPA) bilayers bearing both negative charges and branched methyl groups preserved over 80% of the activity. These results strongly suggest that the head groups and alkyl chains of phospholipids are essential for boundary lipids and greatly influence the biological function of bR.