Soil Organic Matter Pools Research Articles

Modeling boreal forest soil dynamics with the microbially explicit soil model MIMICS+ (v1.0)

Abstract. Understanding carbon exchange processes between land reservoirs and the atmosphere is essential for predicting carbon–climate feedbacks. Still, considerable uncertainty remains in the representation of the terrestrial carbon cycle in Earth system models. An emerging strategy to constrain these uncertainties is to include the role of different microbial groups explicitly. Following this approach, we extend the framework of the MIcrobial-MIneral Carbon Stabilization (MIMICS) model with additional mycorrhizal groups and a nitrogen cycle that includes a novel representation of inorganic nitrogen sorption to particles via a Langmuir isotherm. MIMICS+ v1.0 is designed to capture and quantify relationships between soil microorganisms and their environment, with a particular emphasis on boreal ecosystems. We evaluated MIMICS+ against podzolic soil profiles in Norwegian forests as well as the conventional Community Land Model (CLM). MIMICS+ matched observed carbon stocks better than CLM and gave a broader range of C:N ratios, more in line with observations. This is mainly explained by a higher directly plant-derived fraction into the soil organic matter (SOM) pools. The model produces microbial biomass estimates in line with numbers reported in the literature. MIMICS+ also showed better representation of climate gradients than CLM, especially in terms of temperature. To investigate responses to changes in nutrient availability, we performed an N enrichment experiment and found that nitrogen sorbed to particles through the sorption algorithm served as a long-term storage of nutrients for the microbes. Furthermore, although the microbial groups responded considerably to the nitrogen enrichment, we only saw minor responses for carbon storage and respiration. Together, our results present MIMICS+ as an attractive tool for further investigations of interactions between microbial functioning and their (changing) environment.

Conversion of Natural Soil to Paddy Promotes Soil Organic Matter Degradation in Small-Particle Fractions: δ13C and Lipid Biomarker Evidence

The stabilization mechanism of soil organic matter (SOM) has received considerable attention. It is widely accepted that mineral sorption/protection is important for SOM stabilization. However, it remains unclear which organic carbon component is beneficial for mineral protection. We collected soil samples from a paddy field (TP) to compare with natural soil (NS). To illustrate the behavior of different SOM pools and their protection by particles, we separated the soils into different particle-size fractions and then removed the active minerals using an acid mixture (1 M HCl/10% HF). The different carbon pools were analyzed using stable carbon isotopes and lipid biomarkers. Our study showed that acid treatment evidently increased the extractability of free lipids, usually over 60%, which confirmed the predominant role of minerals in SOM protection. For NS, the δ13C values increased with decreasing soil particle sizes and soil depths, indicating that 13C-enriched SOM was selectively preserved. However, this trend disappeared after cultivation, which was mainly attributed to the combined effects of the input of 13C-depleted fresh SOM and decomposition of the preserved 13C-enriched SOM. Meanwhile, based on the degradation parameters of the overall lipid biomarkers, SOM showed higher degradation states in clay and silt fractions than in the sand fraction before cultivation. It is possible that the small particle-size fractions could selectively absorb highly degraded SOM. The clay-associated SOM showed a low degradation state, but its carbon content was low after cultivation. We propose that the previously protected SOM was degraded after cultivation and was replaced by relatively fresh SOM, which should be carefully monitored during SOM management.

Interaction between ectomycorrhizal and ericoid mycorrhizal plants decelerates stable soil organic matter decomposition

Boreal forests are N-limited ecosystems storing globally significant amounts of carbon (C) belowground as soil organic matter (SOM). The significant role of mycorrhizal fungi, both ericoid (ERM) and ectomycorrhizal (ECM) in decomposition and building up SOM has been proposed, but it is still largely unknown how these two types of mycorrhiza interact in terms of SOM changes. Here we try to elucidate the combined effect of these mycorrhizal types on the SOM decomposition and accumulation in a pot study with ECM-pine (Pinus sylvestris L.) and ERM-heather (Calluna vulgaris L.). Experimental design included plants growing alone or in a mixture, and a non-planted control. In contrast to the mixture, heather growing alone exerted higher biomass, higher uptake of N from stable SOM pool, slightly higher microbial biomass C and fungal biomass. Moreover, heather soil had the highest dissolved organic carbon and nitrogen. On the contrary, mixed cultures showed lower growth of heather and stable SOM decomposition. Our results suggest that interaction between ERM and ECM plants may lead to stable SOM accumulation in boreal forest soils.

Organic carbon distribution between structural and process pools in the gray forest soil of different land use

The summarized data on the content of organic carbon (Corg) in the subtypes of gray forest soils occurring on the territory of Russia was presented. It was shown that the humus horizons of virgin light-gray, typical-gray, and dark-gray forest soils contain, on average, 2.16 ± 0.67, 2.42 ± 0.61, and 3.58 ± 0.95% Сorg, respectively, while the plowing layers of arable soils contain 1.36 ± 0.40, 1.71 ± 0.40, and 2.84 ± 0.86%, respectively. Structural (particulate organic matter 0.05–2 mm in size, CPOM, and mineral-associated organic matter <0.05 mm in size, CMAOM) and process (potentially mineralizable organic matter, C0, and microbial biomass, Cmic) pools were isolated in the organic matter of samples from different horizons of gray forest soils (Luvic Retic Greyzemic Phaeozems (Loamic)) under small-leaved forest and barley crop. The CPOM/CMAOM ratio in the upper soil horizons under forest and arable land was 0.60 and 0.26, respectively, and this ratio decreased with depth to 0.05 under both land uses. The sizes of the CMAOM, CPOM, C0, and Cmic pools correlated with each other and depended on the depth of the soil horizon, while the effect of land use on the pool ratios was found only for the surface horizons. The contribution of CPOM and CMAOM to the potentially mineralizable pool of organic matter in gray forest soil was 20–41 and 71–87%, respectively. According to the obtained data, the size of the C0 pool was almost equal to the annual amount of the heterotrophic CO2 emission from the soil. It was emphasized that determining of the sizes and ratios of structural and process soil organic matter pools should be important in the programs of carbon monitoring and recarbonization of agroecosystems.

Biogeochemistry of dissolved organic matter and inorganic solutes in soil profiles of tropical pasturelands

Tropical soils play a critical role in the global biogeochemical cycles and are essential for maintaining the Earth's carbon balance. Understanding the dynamics of dissolved organic matter (DOM) is paramount due to its implications for ecosystem functioning and nutrient cycling. This study comprehensively evaluated the origin, distribution, and composition of DOM and inorganic solutes in Brazilian tropical agricultural soils. Multiple analytical techniques were utilized to assess DOM from soil profiles (0–100 cm depth) across a spectrum of land uses, including a native Atlantic Forest, a degraded pasture, as well as intensive grazing, extensive grazing, and silvopastoral systems. Inorganic elements were quantified to assess the coupling between the organic and inorganic biogeochemical cycles. The dominance of C4 carbon in topsoil layers suggested substantial contributions of organic matter from grasses to the soil organic matter pool. However, with increased depth, C3 carbon inputs became more prominent, indicating the influence of forest vegetation that existed prior to the implementation of agricultural managements. DOM concentrations decreased with soil depth due to reduced carbon inputs, sorption to minerals, or oxidation. DOM composition did not show significant changes among different land use and managements. Lignin was identified as the primary contributor to oxidized DOM with increasing soil depth. The composition of DOM exhibited a shift from more aromatic and higher molecular weight compounds in topsoil layers to smaller, more aliphatic compounds in subsoil layers. Our key findings revealed that aliphatic compounds, particularly fatty acids, tend to accumulate in deeper soil layers. This phenomenon was consistent in pastures dominated by grasses but not in soils near treed vegetation. Overseeding (from C3 plants) did not significantly impact DOM compositions, emphasizing the persistence of C4 plants in these systems. The presence of inorganic elements in soil water extracts showed minimal impact on DOM dynamics, suggesting decoupled organic and inorganic biogeochemical cycles in tropical pasturelands.

Impact of Organic Vegetable System on Soil Organic Matter Pools and CO2 Emission in the Tropical Region

ABSTRACT It is widely recognized that the input of organic matter in tropical agriculture is essential to maintain productivity and soil quality. This study aimed to investigate the dynamics of organic C pools and CO2 emission influenced by organic compost fertilization and leucaena biomass in an area of 6 years under organic farming. The system consisted of 5 treatments based on 5 levels of fertilization with organic compost (0, 10, 20, 30, and 40 t ha−1). Each block was surrounded by leucaena and their pruning’s were distributed in equal proportions for all treatments. Two rotating crops were performed per year, cabbage/corn. Soil samples were collected in the 0–10 and 10–20 cm layers in 2-year seasons. TOC and N stocks were between 23.1 and 51.6 t ha−1, and 2.1 and 5.4 t ha−1, respectively. The highest compost doses increased the microbial biomass C and N. The increase in microbial biomass was followed by higher emissions of C-CO2. Increased microbial quotient values indicated C accumulation in the system by a higher amount of active metabolic C. The microbial biomass was less efficient in the use of the high organic compost doses. The dose of compost should be reduced and applied constantly by the farmers to attend the plant demand by nutrients and increase the efficiency of C sequestration in the soil. This C sequestration will also improve biological activity and soil quality in tropical regions, increasing food production.

Biochar mediates nitrogen investment strategy involved in Chinese fir growth as revealed by molecular information on soil dissolved organic matter

Soil dissolved organic matter (DOM) is the most reactive pool of soil organic matter. Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS) is a powerful tool for obtaining molecular-level DOM information. The ongoing atmospheric nitrogen (N) deposition could cause some negative effects on tropical and subtropical forest ecosystems, and biochar is considered to be an effective soil ameliorator. However, few studies have evaluated the effects of biochar and N deposition, either separately or in combination, on the molecular composition of soil DOM. In this study, we conducted a pot experiment using Chinese fir seedlings amended with biochar (0, 12, and 36 t biochar ha−1, prepared from corn stover at 450 °C) and inorganic N (NH4NO3: 0, 40, and 80 kg N ha−1 y-1) in a full factorial design (four replications per treatment) and characterized soil DOM using FT-ICR-MS. A total of 6084 types of formulas were identified in this study. All 36 samples had 2109 types of formulas in common, which had much lower N/C and P/C ratios than the bulk DOM samples. Permutation-based multivariate analysis of variance revealed that both N addition and biochar application had a significant impact on DOM chemodiversity. N addition increased the relative abundance of lignins and lipids, which may be a way for Chinese fir to acclimate to an acidic environment by expanding roots and fixing N. Biochar amendment increased the relative abundance of carbohydrates and tannins in soil DOM at each N application level. Soil pH is a key soil variable controlling DOM composition, and an increase in pH after biochar amendment contributed greatly to the occurrence of DOM compounds with an O/C > 0.5, which are easily degradable. In particular, lignins associated with low N/C were more abundant at higher pH. Biochar application also improved the efficiency of roots in acquiring nutrients, reduced the relative biomass of roots, and decreased the relative content of lignins or lipids, which primarily originated from the roots. In summary, biochar amendment effectively alleviated the negative effects of N addition by investing more N into the production of easily degradable DOM compounds and stimulating the biogeochemical cycle of N.

Arbuscular mycorrhiza convey significant plant carbon to a diverse hyphosphere microbial food web and mineral-associated organic matter.

Arbuscular mycorrhizal fungi (AMF) transport substantial plant carbon (C) that serves as a substrate for soil organisms, a precursor of soil organic matter (SOM), and a driver of soil microbial dynamics. Using two-chamber microcosms where an air gap isolated AMF from roots, we 13CO2-labeled Avena barbata for 6 wk and measured the C Rhizophagus intraradices transferred to SOM and hyphosphere microorganisms. NanoSIMS imaging revealed hyphae and roots had similar 13C enrichment. SOM density fractionation, 13C NMR, and IRMS showed AMF transferred 0.77 mg C g-1 of soil (increasing total C by 2% relative to non-mycorrhizal controls); 33% was found in occluded or mineral-associated pools. In the AMF hyphosphere, there was no overall change in community diversity but 36 bacterial ASVs significantly changed in relative abundance. With stable isotope probing (SIP)-enabled shotgun sequencing, we found taxa from the Solibacterales, Sphingobacteriales, Myxococcales, and Nitrososphaerales (ammonium oxidizing archaea) were highly enriched in AMF-imported 13C (> 20 atom%). Mapping sequences from 13C-SIP metagenomes to total ASVs showed at least 92 bacteria and archaea were significantly 13C-enriched. Our results illustrate the quantitative and ecological impact of hyphal C transport on the formation of potentially protective SOM pools and microbial roles in the AMF hyphosphere soil food web.

Elevated litterfall phosphorus reduces litter and soil organic matter pools in exotic-dominated novel forests in Singapore

Abstract The estimation of leaf litter turnover is often limited to early-stage decomposition using unrepresentative models and litter types. In tropical secondary forests, particularly exotic-dominated novel forests, the characterisation of litter turnover remains poor. This study estimated the annual turnover of in-situ leaf litter across four forest successional types in Singapore using a Weibull residence time model. Litter turnover and nutrient dynamics diverged between young secondary and old-growth forests. In particular, within novel forests, annual phosphorus return via leaf litterfall was three times that of primary forests, while the mass loss of in-situ leaf litter was highest among all forest successional types, estimated at 92.8% annually with a mean residence time of 176 days, resulting in a litter pool size a third that of primary forests. Our findings suggest that tree species composition and species-specific effects shaped the observed variations in litter turnover and nutrient dynamics across forest successional types and forest stands, whereas tree species richness, canopy structure, soil nutrient levels, and microclimate were found to be non-predictors. Taken together, our study provides an insight into litter turnover in human-modified tropical landscapes increasingly characterised by novel forests, potentially leading to a reduction in surface litter and soil organic carbon pools.

Mineralization and temperature sensitivity of soil organic matter pools of contrasting lability

AbstractUnderstanding the temperature sensitivity (Q10) of soil organic matter (SOM) decomposition is crucial to predict CO2 emissions and carbon (C) stocks under global warming. This study describes the decomposition and Q10 of four soil C pools: (1) very labile (glucose addition (GLU), representing root exudates), (2) labile (microbial turnover, MT), (3) potentially labile (primed C pool, PE), and (4) resistant (inherent soil C, RES). The soil (loamy Luvisol) was incubated for 4 and 144 days at five temperatures (0, 10, 20, 30, and 40°C) with or without 14C‐labeled glucose. The dynamics of CO2 fluxes were measured during short (0–4 days) and long (5–144 days) term incubations. Glucose was mineralized following a two‐pool exponential function. The half‐life of the decomposition of the GLU pool decreased by 3 times as temperature increased from 10 to 40 °C. The flux of unlabeled CO2 over 4 days reflects a strong contribution to the apparent priming especially at high temperature, which was due to the accelerated microbial biomass turnover. Accordingly, the CO2 flux increased during short‐term incubation and was dominated by the decomposition of labile SOM and microbial biomass turnover, whereas during the long‐term incubation, the CO2 was mainly released from the temperature‐stimulated decomposition of RES pool. The short‐term Q10 of the soil C pools decreased in the order: GLU (2.1) > MT (1.8) > PE (1.3) ≈ RES (1.6) over a few days (0–4 days), but the Q10 measured over the long‐term period (144 days) was in the range of 1.2 (PE) to 1.8 (RES) and decreased in the order RES > MT > PE > GLU. In conclusion, CO2 emissions linearly increased with temperature in all pools over short‐ and long‐term incubation, except for the GLU pool during long‐term incubation. The Q10 strongly depends on the availability of C pools for microorganisms and decreases over time with the exhaustion of available substances in soil. This needs to be considered when estimating temperature effects on CO2 emissions and C turnover in soil.

Differential influences of forest floor-pyrolyzed biochar-derived and leached dissolved organic matter interaction with natural iron-bearing minerals in forest subsoil on the formation of mineral-associated soil organic matter

The vertical sequestration of dissolved organic matter (DOM) by iron minerals along the soil profile is assumed to be central to the long-term storage of the soil organic matter (SOM) pool. However, there is limited information available about how the interaction between DOM and natural iron-bearing minerals shape mineral SOM associations quantitatively and qualitatively in forest subsoils. Here, we systematically investigated the influences of forest organic layer-pyrolyzed biochar-derived DOM (BDOM) and leached DOM (LDOM) on quantity, molecular composition, and diversity of deposition layer-derived iron minerals-associated OM by using Fourier transform ion cyclotron resonance mass spectrometry and other complementary spectroscopy. Results indicated natural iron minerals (FeOx1 and FeOx2) had a greater capacity for sorbing LDOM with higher aromaticity and molecular weight than those of BDOM, and the higher proportion of goethite and short-order-range phase in natural iron minerals was closely related to the increased OM adsorption capacity. We also observed the preferential sorption of oxygen/nitrogen-rich polycyclic aromatic compounds and carboxylic-containing compounds in LDOM and concurrent the potential release of lignin-like/aromatics compounds and carboxyl/nitrogen-less aliphatic compounds from native OM coprecipitates into the solution. However, unsaturated and oxidized phenolic compounds in BDOM had a stronger affinity for FeOx through hydrophobic partitioning and specific polar interactions, and concomitantly the partial release of nitrogen-free aliphatic and other carboxyl-rich compounds. More nitrogen structures in aromatic-containing compounds can improve the saturation level and polarity of BDOM. Compared with BDOM, LDOM exerted a stronger control over the exchange of native OM from subsoil natural iron-bearing minerals and substantially enhanced the molecular diversity of the reconstituted mineral-associated OM during the adsorptive fractionation. Overall, these findings suggest the compositional evolution of DOM profoundly shapes SOM formation and persistence in forest subsoils, which is the key to understanding DOM cycling and contaminant fate during its passage through the soil.

Comparative analysis of soil organic matter fractions, lability, stability ratios, and carbon management index in various land use types within bharatpur catchment, Chitwan District, Nepal

BackgroundLand use and land cover changes have a significant impact on the dynamics of soil organic matter (SOM) and its fractions, as well as on overall soil health. This study conducted in Bharatpur Catchment, Chitwan District, Nepal, aimed to assess and quantify variations in total soil organic matter (TSOMC), labile organic matter fraction (CL), stable organic matter fraction (CS), stability ratio (SR), and carbon management index (CMI) across seven land use types: pastureland, forestland, fruit orchards, small-scale conventional agricultural land, large-scale conventional agricultural land, large-scale alternative fallow and conventional agricultural land, and organic farming agricultural land. The study also explored the potential use of the Carbon Management Index (CMI) and stability ratio (SR) as indicators of soil degradation or improvement in response to land use changes.ResultsThe findings revealed significant differences in mean values of TSOMC, CL, and CS among the different land use types. Forestland and organic farming exhibited significantly higher TSOMC (3.24%, 3.12%) compared to fruit orchard lands (2.62%), small scale conventional farming (2.22%), alternative fallow and conventional farming (2.06%), large scale conventional farming (1.84%) and pastureland (1.20%). Organic farming and Forestland also had significantly higher CL (1.85%, 1.84%) and CS (1.27%, 1.39%) compared to all other land use types. Forest and organic farming lands showed higher CMI values, while pastures and forests exhibited higher SR values compared to the rest of the land use types.ConclusionsThis study highlights the influence of various land use types on soil organic matter pools and demonstrates the potential of CMI and SR as indicators for assessing soil degradation or improvement in response to land use and land cover changes.

Gliricidia intercropping supports soil organic matter stabilization at Makoka Research Station, Malawi

Intercropping agriculture with legume trees is a promising strategy to improve soils with low soil organic matter (SOM) and nitrogen (N) contents, which is a common problem in many Southern African regions. Objective of this research was to explore long-term effects of legume-intercropping on SOM pools and soil fertility. We examined a maize-based cropping system with gliricidia (Gliricidia sepium) as intercropping legume tree on a Ferric Lixisol in Southern Malawi. The experimental trial at Makoka Research Station was in its 29th year of management with leaf biomass incorporated into the soil regularly. We determined concentrations of organic carbon (C) and N, exchangeable cations, and available phosphorus (P) of topsoil samples (0–20 cm). We used density fractionation of SOM to gain fractions that roughly approximate SOM pools with fast turnover (not associated to soil minerals), intermediate turnover (occluded within soil aggregates) and slow turnover (mineral associated SOM). We further determined water dispersible clay (WDC) and pedogenic oxides, as these are often involved in the C-stabilization process in tropical soils. Maize-gliricidia intercropping plots showed higher soil pH-values, and higher concentrations of exchangeable Mg and Ca than plots with maize monoculture. In addition, significantly higher contents of C (17.3 vs. 7.03 g kg−1) and N (1.51 vs. 0.7 g kg−1) were found at intercropping plots indicating a C-sequestration rate of 0.3 g C kg−1 a−1, while monoculture induced the loss of SOM with a rate of −0.1 g C kg−1 a−1. C and N contents doubled in pools with fast and with slow turnover and increased by >300% in SOM pool where C and N is bound in soil aggregates. Concomitantly, WDC was significantly lower in intercropping plots than in monoculture plots. Our data emphasize the fast turnover of SOM in subtropical soils and indicate that SOM in arable soils decreases continuously without suitable C-input strategy. Maize-gliricidia intercropping had positive effects on biomass production and C-input at Makoka Research Station and improved soil fertility. In addition, aggregate formation was enhanced and storage of SOM within aggregates and at mineral surfaces increased. Our results indicate a great potential of maize-gliricidia intercropping for improved C management in subtropical Lixisols. Intensive monitoring seems to be promising to validate and quantify the impacts of this measure.

Depth-dependent effects of ericoid mycorrhizal shrubs on soil carbon and nitrogen pools are accentuated under arbuscular mycorrhizal trees.

Plant mycorrhizal associations influence the accumulation and persistence of soil organic matter and could therefore shape ecosystem biogeochemical responses to global changes that are altering forest composition. For instance, arbuscular mycorrhizal (AM) tree dominance is increasing in temperate forests, and ericoid mycorrhizal (ErM) shrubs can respond positively to canopy disturbances. Yet how shifts in the co-occurrence of trees and shrubs with different mycorrhizal associations will affect soil organic matter pools remains largely unknown. We examine the effects of ErM shrubs on soil carbon and nitrogen stocks and indicators of microbial activity at different depths across gradients of AM versus ectomycorrhizal (EcM) tree dominance in three temperate forest sites. We find that ErM shrubs strongly modulate tree mycorrhizal dominance effects. In surface soils, ErM shrubs increase particulate organic matter accumulation and weaken the positive relationship between soil organic matter stocks and indicators of microbial activity. These effects are strongest under AM trees that lack fungal symbionts that can degrade organic matter. In subsurface soil organic matter pools, by contrast, tree mycorrhizal dominance effects are stronger than those of ErM shrubs. Ectomycorrhizal tree dominance has a negative influence on particulate and mineral-associated soil organic matter pools, and these effects are stronger for nitrogen than for carbon stocks. Our findings suggest that increasing co-occurrence of ErM shrubs and AM trees will enhance particulate organic matter accumulation in surface soils by suppressing microbial activity while having little influence on mineral-associated organic matter in subsurface soils. Our study highlights the importance of considering interactions between co-occurring plant mycorrhizal types, as well as their depth-dependent effects, for projecting changes in soil carbon and nitrogen stocks in response to compositional shifts in temperate forests driven by disturbances and global change.

Tracing sources and turnover of soil organic matter in a long-term irrigated dry forest using a novel hydrogen isotope approach

The contribution from foliage, roots, and fungi to soil organic matter (SOM) represents a key unknown in SOM dynamics. Since stable hydrogen isotope ratios (δ2Hn) can greatly differ among these sources, we explored δ2Hn to elucidate sources contribution to SOM. Moreover, we assessed whether addition of 2H-depleted water – providing 2H-signal that gets incorporated into organic matter – allows tracing of new organic H and thus assessing SOM turnover.In a 17-year-long irrigation experiment in a dry pine forest, we measured δ2Hn and stable carbon and nitrogen isotope ratios (δ13C, δ15N) in SOM sources, bulk SOM and particle-size fractions. Relative source contribution to SOM was estimated by Bayesian mixing models including all three isotopes.The δ2Hn increased from foliar litter (−153‰) to fine roots (−118‰) and fungal mycelia (−81‰). Mixing models indicated that foliar litter dominated organic layers (69 ± 15%) and coarse particulate organic matter (POM) at 0–5 cm (65 ± 12%). In contrast, roots dominated fine POM at 2–5 cm (58 ± 12%). Fungal mycelia contributed only to 1–5% of coarse and fine POM, but to 5–25% of mineral associated organic matter (MOM) at 0–5 cm.The soil water 2H-depletion with irrigation (−76‰ vs −68‰ at 0–10 cm) was paralleled by lower δ2Hn in coarse POM of irrigated vs dry plots (−122‰ vs −111‰ at 0–5 cm), indicating organic H turnover of less than 17 years. In contrast, δ2Hn in fine POM and MOM decreased only by 3‰ with irrigation, implying mean residence times of approximately 30 years.While δ13C and δ15N differed by a maximum of 1‰ between plant sources, δ2Hn were 30–39‰ higher in roots than foliar litter, thus improving SOM sources differentiation. Long-term 2H-labelling by irrigation indicated higher organic H turnover in coarse vs fine soil fractions, offering a novel tool to identify SOM cycling and microbial H incorporation into SOM pools.

Enhancing Soil Organic Matter Transformation through Sustainable Farming Practices: Evaluating Labile Soil Organic Matter Fraction Dynamics and Identifying Potential Early Indicators

The growing global population and increasing demand for agricultural products have exerted significant pressure on agricultural systems. As a result, soil organic matter depletion and degradation have become prevalent issues, including in regions such as South Bohemia, Czech Republic, where conventional farming practices are predominant. Soil organic matter (SOM) plays a critical role in soil health, crop productivity, and the sustainability of agricultural systems, with changes occurring in both the total and labile fractions of the organic matter pools. However, changes in the total soil organic matter carbon pool (TOC) resulting from agricultural practices occur gradually and may become evident only after several years, posing challenges for timely management adjustments. Therefore, the identification of early indicators of SOM dynamics is crucial for implementing prompt corrective actions. The aim of this study was to evaluate the effects of sustainable management practices, such as cultivated crops (Pisum sativum and Lupinus albus), selected entomopathogenic and myco parasitic fungi (MEHA) (Trichoderma virens and Metarhizium brunneum), and lactic acid bacteria (LAB) on the labile fraction of the SOM pool (CLSOM) and identify potential early indicators. Our findings demonstrated that the type of crop and applied microorganisms (treatments) significantly affected the CLSOM in peas, and the crop growth stages affected the TOC in both pea and lupin. Growth stages also showed an impact on the CLSOM in lupin. Moreover, in both crops, the change in CLSOM correlated with changes in the SOM oxidation rate constant (k), carbon lability index (LI), carbon management index (CMI), and carbon enrichment ratio (ER). Conversely, changes in the TOC did not exhibit significant correlations, except for LI and CMI, which showed a positive correlation with the TOC in peas (p < 0.05). Furthermore, the separate application of MEHA and LAB on seeds or leaves resulted in increased SOM carbon pools compared with the combined application. The application of these beneficial microorganisms in pea and lupin crops showed potential in maintaining or increasing CLSOM, which can be assessed early through indicators such as k, LI, CMI, and ER. Contributing to the development of sustainable soil management strategies, future research should further investigate different crops and microorganisms—and the mechanisms underlying their observed relationships—and explore additional early indicators to refine and optimize sustainable agricultural practices.

Is macroporosity controlled by complexed clay and soil organic carbon?

Multi-scale evidence of rapid, climate-induced soil structural changes occurring at yearly to decadal timescales is mounting. As a result, it has become increasingly important to identify the properties and mechanisms controlling the development and maintenance of soil structure and associated macroporosity. This is especially relevant since macroporosity has disproportionate effects on saturated hydraulic conductivity (Ksat) which strongly influences water storage and flux, thus, affecting the water cycle. In this study, we use decision trees and piecewise linear regression to assess the influence of soil and climate properties on effective porosity (EP; a proxy of macroporosity) in both surface and subsurface horizons under varying land-use and management practices. Data from 1,491 pedons (3,679 horizons) spanning five ecoregions representing bioclimate (e.g., potential vegetation) across the conterminous US demonstrate that, at a continental scale, EP in surface (A) and subsurface (B) horizons is strongly dependent on the complexed fraction of the total mass of soil organic carbon (SOC) and clay; a combined fraction that we refer to as complexed organic carbon and clay (COCC). EP showed a slight positive response to COCC in A horizons but increased steeply with increasing COCC in B horizons. This is because the smaller values of COCC in B horizons reflect a larger pool of clay that has a greater potential to accommodate and complex additions of SOC promoting stronger organo-mineral bonds and the concomitant development and maintenance of soil structure in these horizons. In contrast, larger values of COCC in A horizons reflect conditions where all or most of the clay fraction is effectively complexed with SOC resulting in a larger pool of non-complexed soil organic matter with varying contrasting effects on macroporosity that ultimately mute the response of EP to increases in COCC. In surface horizons, indirect factors such as mean annual precipitation and land use were important predictors of EP, whereas COCC was more influential in controlling EP within the subsoil. The EP-COCC relationship also holds within ecoregions but its effect is mitigated by soil and climate interactions suggesting that the effect of climate on this relationship is indirect and complex. Plowed surface horizons and horizons underlying plowed layers showed greater homogenization (due to disturbance effects reducing heterogeneity in the soil) as well as a reduction in the magnitude and rate of change of EP as a function of COCC compared to undisturbed horizons. Our findings suggest that the complexed fraction of clay and SOC is important for controlling macroporosity and Ksat at ecoregion scales and that the EP-COCC relationship may be an important framework for understanding and predicting future land use- and climate-induced changes in soil hydraulic properties.

Molecular composition and possible transformations of labile soil organic matter fractions in Mediterranean arable soils: Relevance and implications

With the increased global interest in sequestering carbon in soil, it is necessary to understand the composition of different pools of soil organic matter (SOM) that cycle over suitably short timeframes. To explore in detail the chemical composition of agroecologically relevant yet distinct fractions of SOM, the light fraction of SOM (LFOM), the 53-μm particulate organic matter (POM), and the mobile humic acid (MHA) fractions were sequentially extracted from agricultural soils and characterized using both 13C cross polarization magic angle spinning nuclear magnetic resonance (CPMAS NMR) spectroscopy and also Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS). The NMR results showed a decrease in the O-alkyl C region assigned to carbohydrates (51–110 ppm) and an increase in the aromatic region (111–161 ppm) proceeding from the LFOM to the POM and then to the MHA fraction. Similarly, based on the thousands of molecular formulae assigned to the peaks detected by FT-ICR-MS, condensed hydrocarbons were dominant only in the MHA, while aliphatic formulae were abundant in the POM and LFOM fractions. The molecular formulae of the LFOM and POM were mainly grouped in the high H/C lipid-like and aliphatic space, whereas a portion of the MHA compounds showed an extremely high (17–33, average of 25) double bond equivalent (DBE) values, corresponding to low H/C values of 0.3–0.6, representative of condensed hydrocarbons. The labile components appeared most pronounced in the POM (93% of formulae have H/C ≥ 1.5) similar to the LFOM (89% of formulae have H/C ≥ 1.5) but in contrast to the MHA (74% of formulae have H/C ≥ 1.5). The presence of both labile and recalcitrant components in the MHA fraction suggests that the stability and persistence of soil organic matter is influenced by a complex interaction of physical, chemical, and biological factors in soil. Understanding the composition and distribution of different SOM fractions can provide valuable insights into the processes that govern carbon cycling in soils, which can help inform strategies for sustainable land management and climate change mitigation.

The effects of biochar on soil organic matter pools are not influenced by climate change

The sustainability of Mediterranean croplands is threatened by climate warming and rainfall reduction. The use of biochar as an amendment represents a tool to store organic carbon (C) in soil. The vulnerability of soil organic C (SOC) to the joint effects of climate change and biochar application needs to be better understood by investigating its main pools. Here, we evaluated the effects of partial rain exclusion (∼30%) and temperature increase (∼2 °C), combined with biochar amendment, on the distribution of soil organic matter (SOM) into particulate organic matter (POM) and the mineral-associated organic matter (MAOM). A set of indices suggested an increase in thermal stability in response to biochar addition in both POM and MAOM fractions. The MAOM fraction, compared to the POM, was particularly enriched in labile substances. Data from micro-Raman spectroscopy suggested that the POM fraction contained biochar particles with a more ordered structure, whereas the structural order decreased in the MAOM fraction, especially after climate manipulation. Crystalline Fe oxides (hematite) and a mix of ferrihydrite and hematite were detected in the POM and in the MAOM fraction, respectively, of the unamended plots under climate manipulation, but not under ambient conditions. Conversely, in the amended soil, climate manipulation did not induce changes in Fe speciation. Our work underlines the importance of discretely taking into account responses of both MAOM and POM to better understand the mechanistic drivers of SOC storage and dynamics.

Soil CO2 efflux dynamics in an integrated crop–livestock system

AbstractIntegrated crop–livestock (ICL) systems have shown potential to provide a variety of environmental benefits including soil carbon (C) increases relative to conventional row cropping systems. However, studies documenting C dynamics of ICL systems in the northern Great Plains are lacking relative to other agroecosystems. Soil carbon dioxide (CO2) efflux, crop biomass, and soil organic matter (SOM) pools were monitored over 3 years in an ICL rotation (corn [Zea mays L.]/soybean [Glycine max L.]–spring wheat [Triticum aestivum L.] + cover crop–cover crop) with fall grazing, a conventional cropping system rotation (corn–spring wheat–soybean) and fall grazed and ungrazed mixed‐grass pasture near Mandan, ND. Cropped treatments were under no‐till management. Annual aboveground crop residue biomass C was similar in the ICL and conventional systems, while less in the grazed pasture (4.18, 3.83, and 1.21 Mg C ha−1 year−1 respectively; p = 0.039). Annual soil CO2 efflux was greater in the ICL, grazed, and ungrazed pasture systems than the conventional system (8.05, 8.73, 8.25, and 5.81 Mg C ha−1 year−1, respectively; p < 0.001). Among crop phases in the ICL and conventional cropping systems, cover crops contributed to greater CO2 efflux in the spring and fall. SOM and C mineralization were greater at 0–5 cm in the ICL system compared to the conventional cropping system (6.6% vs. 6.3%, p = 0.028 and 248 vs. 184 mg CO2–C kg−1, p < 0.001, respectively). Interseeded cover crops in ICL systems can contribute increased root respiration and enhanced SOM pools relative to conventional cropping systems under semiarid conditions.