Electron microscopic (TEM) study of bacterial-sized planktonic fractions recovered from the water column samples of a small oligotrophic lake, consistently showed the presence of non-living organic and inorganic particles as prominent parts of the micro habitat. An all important objective of this work was to determine the composition and possible origins of the minute particles. They were of several morphological types, described by transmission electron microscopic (TEM) appearance as: spherical, oblong, cuboidal, plates and fibrillar. The TEM used in the scanning transmission mode (STEM) in conjunction with the Princeton Gamma Tech (PGT) System 4 energy dispersive X-ray spectrometer (EDX) allowed the determination of the elemental composition of individual particles. The particles referred to as spherical were electron dense and were less than 1 μm in diameter. They were mainly composed of either Fe or Ti but not both. Cuboidal iron particles 37–75 nm in diameter were found in about equal abundance, but they were arranged in chains of individuals. Oblong particles were from 0.18 to 0.2 nm in width to 0.2 to 0.45 μm in length. Most were composed mainly of Ca, S and O but other elemental compositions were observed also. Plates with jagged edges composed of Al and Si were somewhat electron transparent. Both were less than 1 μm in largest dimension. Fibrillar particles were most abundant and were composed of Fe, Si, Cl, K, Na, O and C. They ranged from 90 Å to 37 nm in thickness and 1 μm to several μm in length. Particles of planktonic origin were observed with regularity including fragments of diatom cell walls and scales. These particles were composed of Si and O. Hexagonally shaped virus-like particles of several sizes were observed also. The relationship between elements in micro particles and their possible origins are discussed.