New ligand derived from hydroxy naphthaldhyde (LCAT1) was synthetized and the structure of the formed Schiff base was confirmed by various analytical and spectroscopic methods. Elemental analysis, mass spectrometry and NMR studies confirmed the structure of the ligand. Theoretical calculations (DFT) were performed to study the molecular structure, chemical reactivity and electronic properties of this ligand. This study shows good agreement with the experimental results obtained using infrared spectrometry and UV-visible spectrophotometry. The optimized structure has been used to perform the molecular docking studies. The homology modeling and molecular docking were investigated in order to check their anti-leukemia activities toward several leukemia cells. In addition, in silico ADME/T modeling was employed to evaluate absorption, distribution, metabolism, and excretion pharmacological parameters of the ligand. The DFT study indicates that the evaluated parameters, such as Mulliken charges and molecular orbitals, as well as the MEP results, are consistent with the localization of electrophilic and nucleophilic attack sites. Furthermore, the data indicate significant chemical reactivity associated with low kinetic stability of the ligand. In accordance with the principle of a 90% critical assessment, the homological modeling model used is considered to be the most appropriate. The molecular docking results indicated that our molecule has a strong affinity for DNA by forming hydrogen bonds with the donor’s groups and exhibits a good leukemia activity against cell lines through the formation of strong interaction with their receptors. The results showed high binding energy and remarkable inhibition constants toward receptors 5VOM (−8.03 Kcal/mol, 1. 31 µM), 1NJS (−7.68 Kcal/mol, 2.35 µM), 7JXU. In silico ADME/T modeling showed that the properties of the synthesized ligand are similar to those of the drugs. The predicted toxicity of the ligand reveals that LCAT1 is nontoxic, with no hepatotoxicity, no mutagenicity and no carcinogenicity.
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