Sediment Oxygen Uptake Research Articles

Sediment oxygen uptake and hypoxia in coastal oceans, the Pearl River Estuary region

Hypoxia is increasing in coastal oceans due to high oxygen consumption and weak ventilation. Quantifying biological oxygen uptake and how its effects on hypoxia respond to stratification is important for management and predicting future trends. This work introduces a simple analysis to quantify and compare the biological and physical drivers of hypoxia, by using an example from the Pearl River Estuary (PRE) region (10–70 m deep). We show that in the PRE region, sediment respires ∼50 % of organic matter produced in the water column and oxidizes ∼88 % of the ammonium produced from sediment organic matter degradation. These processes lead to high sediment oxygen uptake (SOU; 41.1 ± 16.3 mmol m-2d-1). Under stratification, sediment's effect on the bottom oxygen is strongly regulated by the thickness of the bottom boundary layer (BBL), and the robust relationships can be used to parameterize SOU. We then construct a simple and generic mass-balance model to estimate the water column oxygen uptake in the BBL (WOUBBL) and quantify the total oxygen loss. By comparing model results to observations in the PRE and other similar systems, we show that the sensitivity of oxygen levels to SOU is largely controlled by the duration of stratification, while the organic matter settling velocity controls the contributions of SOU to total oxygen consumption. We further demonstrate how the model can help evaluate the primary drivers of hypoxia (stratification versus high oxygen consumption), determine the time scale of stratification required to develop hypoxia, and explain the within and across system variabilities.

Computationally characterizing the diffusive boundary layer in lakes and reservoirs

PurposeHypolimnetic hypoxia has become increasingly prevalent in stratified water bodies in recent decades due to climate change. One primary sink of dissolved oxygen (DO) is sediment oxygen uptake (JO2\\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\usepackage{upgreek} \\setlength{\\oddsidemargin}{-69pt} \\begin{document}$${J}_{{O}_{2}}$$\\end{document}). On the water side of the sediment–water interface (SWI), JO2\\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\usepackage{upgreek} \\setlength{\\oddsidemargin}{-69pt} \\begin{document}$${J}_{{O}_{2}}$$\\end{document} is controlled by a diffusive boundary layer (DBL), a millimeter-scale layer where molecular diffusion is the primary transport mechanism. In previous studies, the DBL was determined by visual inspection, which is subjective and time-consuming.Material and methodsIn this study, a computational procedure is proposed to determine the SWI and DBL objectively and automatically. The procedure was evaluated for more than 300 DO profiles in the sediment of three eutrophic water bodies spanning gradients of depth and surface area. Synthetic DO profiles were modeled based on sediment characteristics estimated by laboratory experiments. The procedure was further verified adopting the synthetic profiles.Results and discussionThe procedure, which was evaluated for both measured and synthetic DO profiles, determined the SWI and DBL well for both steady and non-steady state DO profiles. A negative relationship between DBL thickness and aeration rates was observed, which agrees with existing literatures.ConclusionsThe procedure is recommended for future studies involving characterizing DBL to improve efficiency and consistency.

Reconciling the importance of meiofauna respiration for oxygen demand in muddy coastal sediments

ABSTRACTMeiofauna, organisms smaller than 1 mm, are the most abundant and diverse invertebrates inhabiting the world's ocean floor but their contribution to benthic oxygen demand is still poorly constrained. This knowledge is crucial for understanding seabed respiration, global marine carbon, and oxygen cycles, which are relevant to all nutrient cycling and energy flows in the ecosystem. It is common to predict meiofauna respiration based on their biomass or volume, which are difficult to quantify, and thus meiofauna are rarely included in biogeochemistry studies. In addition, it is still unknown how well the generalized allometric relations describe all meiofauna respiration. Therefore, we used a novel approach specially developed for single meiofauna respiration measurements to derive the respiration rates of 10 meiofauna groups in two marine and one brackish coastal muddy environments under oxic and hypoxic conditions, representing natural sediment conditions. Our estimates suggest that large ostracods and juveniles of macrofauna (e.g., bivalves, trumpet worms, and priapulids) had the highest individual respiration rates. Meiofauna community as a whole contributed 3–33% to sediment oxygen uptake. However, the most important contributors to the overall sediment oxygen uptake were nematodes and foraminifera which had lower respiration rates but were highly abundant. Therefore, out of more than 22 meiofauna phyla, we recommend that nematode and foraminifera respiration, which contributes 3–30% (total 3–33%) to sediment oxygen uptake, should be taken into consideration in any estimations of benthic oxygen and carbon cycles.

Water quality changes and shift in mechanisms controlling hypoxia in response to pollutant load reductions: A case study for Shiziyang Bay, Southern China

Shiziyang Bay, located in the upstream of the Pearl River Estuary, has frequently suffered from hypoxia since 2000, which has persisted in recent years despite effective controls on anthropogenic pollutant loads. To explore the underlying causes, changes in dissolved oxygen (DO), nutrients, chemical oxygen demand (COD), and chlorophyll a (Chl a) along the bay in response to altered pollutant inputs were investigated using observations collected in summers of 2015–2019 and historical data during 2000–2008. In addition, DO sources and sinks were calculated based on data from August 2020 and laboratory incubations for water column respiration (WCR) and sediment oxygen uptake, and were compared with their equivalents in August 2008 to elucidate changes in primary processes controlling hypoxia. The results showed that ammonia has decreased significantly with pollutant control, while other parameters responded in different trends, especially for Chl a (with a substantial increase over time). The intensified eutrophication contributed to high COD levels, leading to a strong WCR (as dominant oxygen depletion) close to that in the 2000s and thereby maintaining low-oxygen conditions despite reduced effluent discharges. The shifted primary oxygen-consuming substances from allochthonous inputs to in-situ phytoplankton production were also evidenced by significant correlation between oxygen consumption rate and Chl a in recent data. Simultaneously, the enhanced algal blooms could also modulate oxygen supply, resulting in higher photosynthetic oxygen production and lower air-sea reaeration compared with the past. Furthermore, the impact of major environmental changes on exacerbated eutrophication was explored and it was speculated that notable declined sediment loads would be important by improving light conditions to promote phytoplankton proliferation in the bay. Collectively, substantial control on eutrophication as well as tracking DO source-to-sink processes is of great importance to mitigate hypoxia in Shiziyang bay.

Hindcasting Ecosystem Functioning Change in an Anthropogenized Estuary: Implications for an Era of Global Change

Understanding how altered hydrodynamics related to climate change and anthropogenic modifications affect ecosystem integrity of shallow coastal soft-sediment environments requires a sound integration of how species populations influence ecosystem functioning across heterogeneous spatial scales. Here, we hindcasted how intertidal habitat loss and altered hydrodynamic regimes between 1955 and 2010 associated with geomorphological change to accommodate expansion in anthropogenic activities in the Western Scheldt altered spatial patterns and basin-wide estimates of ecosystem functioning. To this end we combined an empirically derived metabolic model for the effect of the common ragworm Hediste diversicolor on sediment biogeochemistry (measured as sediment oxygen uptake) with a hydrodynamic and population biomass distribution model. Our integrative modeling approach predicted an overall decrease by 304 tons in ragworm biomass between 1955 and 2010, accounting for a reduction by 28% in stimulated sediment oxygen uptake at the landscape scale. Local gains or losses in habitat suitability and ecosystem functioning were primarily driven by changes in maximal current velocities and inundation regimes resulting from deepening, dredging and disposal practices. By looking into the past, we have demonstrated how hydro- and morphodynamic changes affect soft-sediment ecology and highlight the applicability of the integrative framework to upscale anticipated population effects on ecosystem functioning.

Allometric scaling of faunal-mediated ecosystem functioning: A case study on two bioturbators in contrasting sediments

Soft-sediment biogeochemistry is influenced by the bioturbation activity of benthic invertebrates. We investigated whether the effect of two macrobenthos bioturbators, Limecola balthica and Hediste diversicolor, on sediment oxygen uptake can be described by allometric principles of metabolic activity scaling with animal body size and population biomass. Microcosms containing reconstructed populations to control density and individual body size were used to compare bioturbation effects and allometric scaling principles between a sandy and muddy sediment. Both species facilitated oxygen uptake in both sediment types, and a major portion of the variance in sediment metabolism (60–98%) could be explained by the per capita body size and density, and total population biomass. The allometric relationship with the stimulated sediment metabolism was similar in sand and mud for Hediste and strongly related to the increasing burrow ventilation rate with population biomass. Limecola irrigated less in mud but stimulated sediment metabolism more in mud in comparison to in sand. We discuss how physico-chemical differences between both sediment types, possible changes in activity, and size-dependent irrigation dynamics can explain the variable effects of Limecola on sediment metabolism. Overall, we provide empirical evidence that allometric laws can be used to upscale bioturbation effects on ecosystem functioning in marine soft sediments from the individual to the population level.

Biogeochemical impact of cable bacteria on coastal Black Sea sediment

Abstract. Cable bacteria can strongly alter sediment biogeochemistry. Here, we used laboratory incubations to determine the potential impact of their activity on the cycling of iron (Fe), phosphorus (P) and sulfur (S). Microsensor depth profiles of oxygen, sulfide and pH in combination with electric potential profiling and fluorescence in situ hybridisation (FISH) analyses showed a rapid development (<5 d) of cable bacteria, followed by a long period of activity (>200 d). During most of the experiment, the current density correlated linearly with the oxygen demand. Sediment oxygen uptake was attributed to the activity of cable bacteria and the oxidation of reduced products from the anaerobic degradation of organic matter, such as ammonium. Pore water sulfide was low (< 5 µM) throughout the experiment. Sulfate reduction acted as the main source of sulfide for cable bacteria. Pore water Fe2+ reached levels of up to 1.7 mM during the incubations, due to the dissolution of FeS (30 %) and siderite, an Fe carbonate mineral (70 %). Following the upward diffusion of Fe2+, a surface enrichment of Fe oxides formed. Hence, besides FeS, siderite may act as a major source of Fe for Fe oxides in coastal surface sediments where cable bacteria are active. Using µXRF, we show that the enrichments in Fe oxides induced by cable bacteria are located in a thin subsurface layer of 0.3 mm. We show that similar subsurface layers enriched in Fe and P are also observed at field sites where cable bacteria were recently active and little bioturbation occurs. This suggests that such subsurface Fe oxide layers, which are not always visible to the naked eye, could potentially be a marker for recent activity of cable bacteria.

Response of benthic nitrogen cycling to estuarine hypoxia

AbstractThe effects of bottom water oxygen concentration on sediment oxygen uptake, oxygen penetration depth, nitrate and ammonium fluxes, anammox, denitrification, dissimilatory nitrate reduction to ammonium, nitrification, and mineralization were investigated off the Changjiang estuary and its adjacent East China Sea, by combining a seasonal comparison with three artificially induced bottom water oxygen conditions (oxic, ambient, and severe hypoxia). A 50% decrease in in‐situ bottom water oxygen concentrations between May and August, led to decreases in the average sediment oxygen uptake and oxygen penetration depth by 23% and 29%, respectively. Anammox rates decreased by a factor of 2.5, and the relative contribution of anammox to the total benthic N‐loss decreased from 20% to 7.4%. However, denitrification rates increased, leading to an overall benthic N‐loss rate of 0.85 mmol N m−2 d−1. At the same time, an increasing contribution of dissimilatory nitrate reduction to ammonium to total nitrate reduction led to higher recycling of inorganic nitrogen during hypoxia in August. Under artificially induced conditions of severe hypoxia, there was a sharp decrease in both sediment oxygen uptake and benthic N‐loss rates by 88% and 38%, respectively. Nitrate and ammonium fluxes showed complex behavior at different sites which could be related to the repression of sedimentary nitrification below a bottom water oxygen threshold of 9.7 μM and increasing dissimilatory nitrate reduction to ammonium. Taken together, our results indicate that changes in benthic nutrient cycling under seasonal hypoxia enhance the retention of both organic and inorganic nitrogen, thereby exacerbating oxygen deficiency.

Effects of benthic hydraulics on sediment oxygen demand in a canyon-shaped deep drinking water reservoir: Experimental and modeling study

Sediment oxygen demand (SOD) is a major contributor to hypolimnetic oxygen depletion and the release of internal nutrient loading. By measuring the SOD in experimental chambers using in both dissolved oxygen (DO) depletion and diffusional oxygen transfer methods, a model of SOD for a sediment bed with water current-induced turbulence was presented. An experimental study was also performed using near-sediment vertical DO profiles and correlated hydraulic parameters stimulated using a computational fluid dynamics model to determine how turbulences and DO concentrations in the overlying water affects SOD and diffusive boundary layer thickness. The dependence of the oxygen transfer coefficient and diffusive boundary layer on hydraulic parameters was quantified, and the SOD was expressed as a function of the shear velocity and the bulk DO concentrations. Theoretical predictions were validated using microelectrode measurements in a series of laboratory experiments. This study found that flow over the sediment surface caused an increase in SOD, attributed to enhanced sediment oxygen uptake and reduced substances fluxes, i.e., for a constant maximum biological oxygen consumption rate, an increased current over the sediment could increase the SOD by 4.5 times compared to stagnant water. These results highlight the importance of considering current-induced SOD increases when designing and implementing aeration/artificial mixing strategies.

Low benthic mineralization and nutrient fluxes in the continental shelf sediment of the northern East China Sea

The sediment oxygen uptake rate, vertical distributions of organic carbon content, sedimentation rate, and benthic nutrient flux were measured from May 29 to June 9, 2015, to evaluate the partitioned organic carbon and nutrient cycles in the sediment of northern part of East China Sea. The sediment oxygen uptake rate, measured by in situ and/or ex situ incubation methods were ranged from 5.81 ± 0.08 to 16.36 ± 0.08 mmol O2 m−2 d−1. The fauna mediated oxygen uptake rate were ranged from 5.80 ± 0.04 to 8.09 ± 1.52 mmol O2 m−2 d−1, showing a strong relationship with the benthic macrofauna biomass and density. The burial flux of organic carbon into sediment layer ranged from 0.26 to 2.04 mmol C m−2 d−1 (average: 0.92 ± 0.64 mmol C m−2 d−1), which comprised 0.5–4.2% (average: 1.9 ± 1.3%) of primary production. Burial efficiency ranged from 2.0 to 22.4% (average: 11.1 ± 7.0%). Low sediment oxygen uptake rate caused low effluxes of dissolved inorganic nitrogen (0.19 ± 0.03–0.73 ± 0.04 mmol N m−2 d−1), phosphate (−0.034 ± 0.004–0.016 ± 0.005 mmol P m−2 d−1), and silicate (0.30 ± 0.03–1.61 ± 0.06 mmol Si m−2 d−1), which accounted for less than 10% of the nutrients required for primary production in the water column.

Deposition of shells modify nutrient fluxes in marine sediments: effects of nutrient enrichment and mitigation by bioturbation below mussel farms

Farming of extractive species such as filter feeding bivalves has been proposed as a potential method to mitigate impacts of eutrophication in marine environments. For such efforts to be sustainable, potential negative effects from mussel farms, such as accumulation of biodeposits in sediment below them, need to be considered and addressed. Benthic burrowing macrofauna strongly influence biogeochemical processes in soft bottom marine habitats by sediment reworking and irrigation and, thus, have the potential to mitigate some of the negative impacts. However, not all biodeposits are organic matter; shells that accumulate on and in the sediment below mussel farms also have the potential to influence processes in the sediment, the activity of bioturbators and the fluxes across the sediment-water interface. In this study, we evaluated the mitigation potential of the bioturbating polychaeteHediste diversicolorin sediments enriched with mussel waste material and the relative impact of mussel shells within the sediment matrix. The polychaetes generally increased fluxes and sediment oxygen uptake. With an observed tendency of increased fluxes of nutrients in sediments containing shells compared to sediments without, the results indicate that the accumulation of shell has a potential to further increase the mitigative effect of the polychaetes by influencing the solute fluxes across the sediment-water interface.

Modeling sediment oxygen demand in a highly productive lake under various trophic scenarios.

Hypolimnetic oxygen depletion in lakes is a widespread problem and is mainly controlled by the sediment oxygen uptake (SOU) and flux of reduced substances out of the sediments (Fred). Especially in eutrophic lakes, Fred may constitute a major fraction of the areal hypolimnetic mineralization rate, but its size and source is often poorly understood. Using a diagenetic reaction-transport model supported by a large data set of sediment porewater concentrations, bulk sediment core data and lake monitoring data, the behavior of Fred was simulated in eutrophic Lake Baldegg. Transient boundary conditions for the gross sedimentation of total organic carbon and for hypolimnetic O2 concentrations were applied to simulate the eutrophication and re-oligotrophication history of the lake. According to the model, Fred is dominated by methanogenesis, where up to70% to the total CH4 is produced from sediments older than 20 years deposited during the time of permanent anoxia between 1890 and 1982. An implementation of simplified seasonal variations of the upper boundary conditions showed that their consideration is not necessary for the assessment of annual average fluxes in long-term simulations. Four lake management scenarios were then implemented to investigate the future development of Fred and SOU until 2050 under different boundary conditions. A comparison of three trophic scenarios showed that further reduction of the lake productivity to at least a mesotrophic state is required to significantly decrease Fred and SOU from the present state. Conversely, a termination of artificial aeration at the present trophic state would result in high rates of organic matter deposition and a long-term increase of Fred from the sediments of Lake Baldegg.

Sedimentary Organic Carbon Budget Across the Slope to the Basin in the Southwestern Ulleung (Tsushima) Basin of the East (Japan) Sea

AbstractWith the total sediment oxygen uptake rates measured using an in situ benthic chamber, vertical distributions of organic carbon, and sedimentation rates estimated by excess 210Pb across the slope to the basin sediment of the southwestern region of the Ulleung (Tsushima) Basin (UB), the partitioning of organic carbon fluxes in the sediment was estimated to understand the biogeochemical cycles of organic carbon in the high productivity marginal sea. The results of depth attenuation of total oxygen uptake (TOU) demonstrate that the organic carbon oxidation of the UB sediment was 2.5 times higher than that obtained from the empirical relationship of the global's depth attenuation of TOU. Similar to TOU, the high mass accumulation rates observed in the slope region were 9.5 times higher than the rate in the basin, indicating that the slope may act as the depocenter of organic carbon. The organic carbon budget with water depth gradient implies that a significant fraction of the organic carbon deposited into sediment is supplied by lateral transport down the slope. Definite increasing C/N ratio with water depth indicates that the refractory organic carbon seems to be successively transported later from shelf to slope. The total burial flux in the sediment of southwestern UB was estimated to be 0.46±0.04 Tg C/year, which is similar to the megadepocenter of the Congo River fan. Our results imply that the UB sediment may be an important biogeochemical reaction place not only for organic carbon but also materials linked to primary production.

Capping with activated carbon reduces nutrient fluxes, denitrification and meiofauna in contaminated sediments

Sediment capping with activated carbon (AC) is an effective technique used in remediation of contaminated sediments, but the ecological effects on benthic microbial activity and meiofauna communities have been largely neglected. This study presents results from a 4-week experiment investigating the influence of two powdered AC materials (bituminous coal-based and coconut shell-derived) and one control material (clay) on biogeochemical processes and meiofauna in contaminated sediments. Capping with AC induced a 62–63% decrease in denitrification and a 66–87% decrease in dissimilatory nitrate reduction to ammonium (DNRA). Sediment porewater pH increased from 7.1 to 9.0 and 9.7 after addition of bituminous AC and biomass-derived AC, respectively. High pH (>8) persisted for at least two weeks in the bituminous AC and for at least 24 days in the coconut based AC, while capping with clay had no effect on pH. We observed a strong impact (nitrate fluxes being halved in presence of AC) on nitrification activity as nitrifiers are sensitive to high pH. This partly explains the significant decrease in nitrate reduction rates since denitrification was almost entirely coupled to nitrification. Total benthic metabolism estimated by sediment oxygen uptake was reduced by 30 and 43% in presence of bituminous coal-based AC and coconut shell-derived AC, respectively. Meiofauna abundances decreased by 60–62% in the AC treatments. Taken together, these observations suggest that AC amendments deplete natural organic carbon, intended as food, to heterotrophic benthic communities. Phosphate efflux was 91% lower in presence of bituminous AC compared to untreated sediment probably due to its content of aluminum (Al) oxides, which have high affinity for phosphate. This study demonstrates that capping with powdered AC produces significant effects on benthic biogeochemical fluxes, microbial processes and meiofauna abundances, which are likely due to an increase in porewater pH and to the sequestration of natural, sedimentary organic matter by AC particles.

Using small‐scale measurements to estimate hypolimnetic oxygen depletion in a deep lake

AbstractLow oxygen concentrations in lakes and reservoirs are an ongoing environmental concern, particularly in light of increasing anthropogenic activity and climate change. Oxygen depletion processes in lakes are still not completely understood and a variety of models have been proposed based on limited field observations. Here, we present field measurements of oxygen depletion processes in a deep lake, Lake Geneva (Switzerland). The aim of this study was to quantify three basic processes controlling hypolimnetic oxygen depletion and their relative contribution to the total oxygen depletion (TOD) rate. Sediment oxygen uptake (SOU) and the flux of reduced substances were estimated based on oxygen microprofile measurements and sediment core data of reduced substances. Acoustic Doppler current profiler measurements and hydrodynamic modeling were used to ensure that SOU was measured under typical hydrodynamic conditions. Comparison with long‐term monitoring data allowed for an estimate of the relative importance of SOU and water column mineralization (WCM). Results show a decrease in both SOU and WCM down to mid‐depth which could not be explained by changes in hydrodynamic conditions or temperature. Below mid‐depth, TOD increased due to an enhanced sediment area to water volume ratio (α). This vertical pattern of oxygen depletion is driven by (1) lake morphometry paired with increasing α, and (2) decreasing organic matter mineralization in the water column with depth. The findings are explained by a model which separates the oxygen depletion into an exponentially decreasing component, representing the fast‐decaying fraction of the organic matter, and a constant background component.

Oxygen transport in periodically ventilated polychaete burrows

Burrowing organisms play a critical role for the functioning of coastal marine sediments, in part due to their pumping of oxygenated water through the burrow. In cohesive sediments, oxygenated burrow water allows for the diffusive flux of oxygen across the burrow wall and into the sediment, where it is consumed. In this study, we quantified the burrow excurrent velocities, volume of water ventilated and oxygenation patterns within the burrow of the polychaete Alitta succinea. We determined that periodic ventilation of the burrow results in oscillations of the flux of oxygen across the burrow wall and oxygen concentration within the sediment near the burrow wall. Additionally, we investigated the effects of temperature changes on oxygen dynamics in the burrow. The volumetric flow rate and frequency of burrow ventilation increased with temperature. Correspondingly, the frequency of the oscillations in oxygen flux across the burrow walls also increased with temperature. However, the time-averaged flux of oxygen across the burrow wall did not change with temperature (1.5 ± 0.3ol m−2 d−1), and the distance of oxygen penetration into the burrow wall decreased with temperature (from 3.4 ± 0.5 at 6 °C to 1.6 ± 0.1 at 33 °C). Thus, seasonal changes in the volume of oxygenated sediment, as well as the pattern of oxygenation that sediment experiences, are expected to be significant while the total oxygen flux is expected to remain relatively uniform. We show that burrower ventilation behavior mediates the effects of temperature on sediment oxygen uptake.

Rates of total oxygen uptake of sediments and benthic nutrient fluxes measured using an in situ autonomous benthic chamber in the sediment of the slope off the southwestern part of Ulleung Basin, East Sea

We have developed a new autonomous benthic lander for deep-sea research, the Korea Institute of Ocean Science and Technology (KIOST) BelcII and BelpII. The benthic lander was successfully tested at 950 and 1450 m water depths on the slope off the southwestern part of the Ulleung Basin in the East Sea of Korea. The ex situ measurements of the total oxygen uptake (TOU) rates at all the stations exceeded the in situ measurement values, and may indicate artificial effects from onboard incubation. The TOU rates were estimated to be 5.80 mmol m–2 d–1 and 3.77 mmol m–2 d–1 at water depths of 950 m and 1450 m, respectively. The benthic nutrient fluxes were also higher at water depths of 950 m, which indicates a partitioning of organic degradation with water depth. In addition, the negative phosphate and nitrogen benthic flux ratios and the higher nitrate removal flux via the sediment–water interface at the slope imply that the nitrogen in the bottom water may be preferentially removed via microbial respiration processes in the sediments, and may be coupled with the low nitrogen-to-phosphate ratio found in the deep water. Although our measurements comprised just two experiments in the slope sediment, the robust in situ measurement of the benthic fluxes in the slope sediment is a forerunner for new research into the biogeochemical cycles across the shelf edge–slope–basin system in the East Sea.

Effect of sediment grain size and bioturbation on decomposition of organic matter from aquaculture

Sediment grain size plays a major role in sediment biogeochemistry and sediments with different grain size are expected to react differently to organic enrichment. Through a mesocosm approach we tested the behavior of sediments with two types of predominant grain size (sandy and muddy sediments) under two levels of organic enrichment, related to mussel and fish farming. The polychaete Hediste diversicolor was used to simulate macrofauna bioturbation and bioirrigation. H. diversicolor stimulated organic matter (OM) mineralization and nutrient recycling. Muddy sediments had more OM from nature, resulting in higher sulfate reduction rates than sandy sediments. Under low levels of organic enrichment grain size did not have any effect on benthic fluxes (sediment oxygen uptake, total CO2, ammonium, nitrate, nitrite and phosphate). However, at high levels of organic enrichment, sandy sediments accumulated less OM, less sulfide and less ammonium than muddy sediments, while sediment oxygen uptake and total CO2 showed similar levels between sandy and muddy sediments. Thus, grain size should be considered a key parameter for site selection of fish farming facilities when aiming for a sustainable aquaculture industry.

Sedimentary organic carbon budget of coastal sediments and the importance of benthic-pelagic coupling off Namhae Island in the South Sea of Korea

We characterized the biogeochemical organic carbon cycles in the surface sediment layer (< 25 cm) in the coastal waters of Namhae off the South Sea of Korea. The total and diffusive sediment oxygen uptake rates were measured using an in situ benthic lander equipped with a benthic chamber and a microprofiler. The bottom water above the sediment-water interface was incubated to estimate the benthic flux of the dissolved inorganic nutrients and the total alkalinity using an in situ benthic chamber. In addition, the particulate materials vertically deposited onto the surface sediment and the sedimentation rates were quantified to calculate the sedimentary organic carbon budget. The total oxygen uptake rate was in the range 34.9 to 54.1 mmol O2 m-2d-1, which is about three times the diffusive oxygen uptake rate. An abnormal oxygen peak observed in the anoxic sediment layer suggests a higher bioirrigation activity in the sediment layer. The oxidation rate of organic carbon at the sediment surface showed a very narrow range (36 ± 7 to 37 ± 7 mmol C m-2d-1), and the burial flux into the sediment layer was in the range 3 to 13 mmol C m-2d-1, which accounted for 9% to 36% of the remineralization rate of the organic carbon. The N and P requirement fluxes for pelagic production could be supported by 29% and 42% of the benthic flux, respectively, which strongly suggests a benthic-pelagic coupling in the coastal area of the South Sea of Korea.

Spatial and historic variability of benthic nitrogen cycling in an anthropogenically impacted estuary

Human activities have dramatically altered reactive nitrogen (N) availability in coastal ecosystems globally. Here we used a gradient of N loading found in a shallow temperate estuary (Waquoit Bay, Massachusetts, USA) to examine how key biogeochemical processes respond to environmental change over time. Using a space-for-time substitution we measured sediment oxygen uptake, dissolved inorganic nitrogen, and di-nitrogen (N2) gas fluxes from sediments collected at four stations. For two stations we compared measurements to those made at the same locations 20 years ago. Spatial variability was not directly correlated to N loading, however the results indicate significant changes in crucial ecosystem processes over time. Sediment oxygen uptake was only 46% of the historic rate and ammonium flux only 34%. The current rate of net denitrification (36 μmol N2-N m-2 h-1) was also lower than the mean historic rate (181 μmol N2-N m-2 h-1). Additionally, at one of the stations we measured a negative average N2 flux rate, indicating that the sediments may be a net source of reactive N. These changes in benthic flux rates are concurrent with a 39% decline in net ecosystem productivity determined from long-term dissolved oxygen data. Although we cannot rule out year-to-year variability we propose that the differences measured between current and historic rates may be explained in part by concurrent changes found in water temperature, precipitation, and freshwater discharge. These regional forcings have the potential to impact N inputs to the estuary, primary producer biomass, and benthic fluxes by altering the supply of organic matter to the sediments. This work highlights the dynamic nature of biogeochemical cycling in coastal ecosystems and underscores the need to better understand long-term changes.