Ecosystem Scale Research Articles

Microclimate temperature effects propagate across scales in forest ecosystems

ContextForest canopies shape subcanopy environments, affecting biodiversity and ecosystem processes. Empirical forest microclimate studies are often restricted to local scales and short-term effects, but forest dynamics unfold at landscape scales and over long time periods.ObjectivesWe developed the first explicit and dynamic implementation of microclimate temperature buffering in a forest landscape model and investigated effects on simulated forest dynamics and outcomes.MethodsWe adapted the individual-based forest landscape and disturbance model iLand to use microclimate temperature for three processes [decomposition, bark beetle (Ips typographus L.) development, and tree seedling establishment]. We simulated forest dynamics with or without microclimate temperature buffering in a temperate European mountain landscape under historical climate and disturbance conditions.ResultsTemperature buffering effects propagated from local to landscape scales. After 1,000 simulation years, average total carbon and cumulative net ecosystem productivity were 2% and 21% higher, respectively, and tree species composition differed in simulations including versus excluding microclimate buffering. When microclimate buffering was included, Norway spruce (Picea abies (L.) Karst.) increased by 9% and European beech (Fagus sylvatica L.) decreased by 12% in mean basal area share. Some effects were amplified across scales, such as a mean 16% decrease in local-scale bark beetle development rates resulting in a mean 45% decrease in landscape-scale bark beetle-caused mortality.ConclusionsMicroclimate effects on forests scaled nonlinearly from stand to landscape and days to millennia, underlining the utility of complex simulation models for dynamic upscaling in space and time. Microclimate temperature buffering can alter forest dynamics at landscape scales.

Combined Impacts of Climate and Tree Physiology on Mercury Accumulation in Tropical and Subtropical Foliage and Robust Model Parametrization.

Atmospheric elemental mercury (Hg0) assimilation by foliage contributes prevalently to the global atmospheric Hg0 sink in forests. Today, little is known about the mechanisms of foliar Hg accumulation and how climate factors and tree physiology interact to impact it. Here, we examined meteorological factors, foliar physiological traits, and Hg accumulation rates from leaf emergence to senescence in a tropical rainforest, tropical savanna, and subtropical evergreen broadleaf forest. Also, robust models for foliar Hg accumulation were parametrized. Generally, foliar Hg accumulation rate in subtropical evergreen forest was highest (16.4 ± 12.3 ng m-2 day-1), followed by the tropical rainforest (14.2 ± 9.8 ng m-2 day-1), and lowest in the tropical savanna (4.7 ± 4.9 ng m-2 day-1). Atmospheric relative humidity, stomatal conductance, and leaf photosynthesis are key drivers of spatial-temporal variations in foliar Hg accumulation. The canopy-structure-induced specific leaf physiological traits drive temporal variations in foliar Hg accumulation, and climate-controlled leaf physiological traits account for spatial variations among three forests. Finally, our robust models enable precise simulation of foliar Hg accumulation rates at both tree species and ecosystem scales facilitating particularly regional and global Hg transport and chemical models to quantify the vegetation's role as a sink for atmospheric Hg0 uptake.

Nitrogen fixation may not alleviate stoichiometric imbalances that limit primary production in eutrophic lake ecosystems.

Ecosystem-scale primary production may be proximately limited by nitrogen (N) but ultimately limited by phosphorus (P) because N2 fixation contributes new N that accumulates relative to P at ecosystem scales. However, the duration needed to transition between proximate N limitation and ultimate P limitation remains unknown for most ecosystems, including lakes. Here we present the results of a fully replicated, multi-annual lake mesocosm experiment that permitted full air-water-sediment interactions that mimicked lake ecosystem ecology. We manipulated N supply relative to P to achieve a gradient of N:P stoichiometry. Despite N2 fixation contributing as much as 80% of reactive N in the low N treatments, phytoplankton biomass in these treatments was not different from the unfertilized controls. This suggests that primary production remained N limited in the lowest N treatments, even when N2 fixation was substantial. Although fixed N inputs reduced the N imbalance relative to P in the low N treatments seasonally, fixed N did not accumulate over multiple years. Additionally, reactive N did not readily accumulate in the high N treatments. Instead, water column stoichiometry was proportional to the experimental N and P additions, suggesting a strong influence from external nutrient loading. Thus, we found no evidence that N accumulation from N2 fixation was sufficient to trigger a transition to ultimate P limitation seasonally or across our 3-year experiment. Rather, our results indicate that proximate N limitation perpetuates in eutrophic lakes, likely due to N export being proportional to its inputs. These findings offer new insight regarding the biogeochemical controls on ecosystem stoichiometry and their influence on the timeframe for proximate N limitation and ultimate P limitation in freshwater, marine, and terrestrial ecosystems.

The Functional and Structural Succession of Mesic-Grassland Soil Microbiomes Beneath Decomposing Large Herbivore Carcasses.

Plant detritus is abundant in grasslands but decomposes slowly and is relatively nutrient-poor, whereas animal carcasses are labile and nutrient-rich. Recent studies have demonstrated that labile nutrients from carcasses can significantly alter the long-term soil microbial function at an ecosystem scale. However, there is a paucity of knowledge on the functional and structural response and temporal scale of soil microbiomes beneath large herbivore carcasses. This study compared microbiome functions and structures of soil beneath Connochaetes taurinus (hereafter 'wildebeest') carcasses at various postmortem intervals of decomposition to matched control samples over 18 months. Microbial functions were compared by their community-level physiological profiles determined by sole-carbon substrate utilisation and structures by metagenomic sequences using 16S rRNA gene markers. Overall metabolism and metabolic diversity remained increased and functionally dissimilar to control soils throughout the experimental period, with successive sole-carbon substrate utilisation observed. Conversely, diversity was initially reduced and structurally dissimilar from the control soil but recovered within the experimental period. The study contributes to the knowledge of carcass decomposition by investigating the long-term soil microbiome dynamics resulting from large herbivore carcasses decomposing in a mesic grassland. Microbial functional succession and ecologically relevant bacterial biomarkers of soil beneath the decomposing carcasses were identified for various postmortem intervals.

Changes in African lion demography and population growth with increased protection in a large, prey‐depleted ecosystem

AbstractLarge carnivores such as the lion are declining across Africa, in part because their large herbivore prey is declining. There is consensus that increased protection from prey depletion will be necessary to reverse the decline of lion populations, but few studies have tested whether increased protection is sufficient to reverse the decline, particularly in the large, open ecosystems where most lions remain. Here, we used an integrated population model to test whether lion demography and population dynamics were measurably improved by increased protection. We used data from monitoring of 358 individuals from 2013 to 2021 in the Greater Kafue Ecosystem, where prior research showed that lions were strongly limited by prey depletion, but protection increased in several well‐defined areas beginning in 2018. In some other areas, protection decreased. In areas with high protection, lion fecundity was 29% higher, and mean annual apparent survival (φ) was 8.3% higher (with a minimum difference of 6.0% for prime‐aged adult females and a maximum difference of 11.9% for sub‐adult males). These demographic benefits combined to produce likely population growth in areas with high protection ( = 1.085, 90% CI = 0.97, 1.21), despite likely population decline in areas with low protection ( = 0.970, 90% CI = 0.88, 1.07). For the ecosystem as a whole, population size remained relatively constant at a moderate density of 3.74 (±0.49 SD) to 4.13 (±0.52 SD) lions/100 km2. With the growth observed in areas with high protection, the expected doubling time was 10 years. Despite this, recovery at the scale of the entire ecosystem is likely to be slow without increased protection; the current growth rate would require 50 years to double. Our results demonstrate that increased protection is likely to improve the reproduction and population growth rate of lions at a large scale within an unfenced ecosystem that has been greatly affected by poaching.

Influences of conifer encroachment and removal on oak woodland ecophysiology and biodiversity—a case study from northern California, U.S.A.

Oregon white oak (Quercus garryana) woodlands are threatened by conifer encroachment established during decades of fire exclusion. Widespread restoration efforts are underway to remove conifers from many oak woodlands in California, Oregon, and Washington. Using water potential, stomatal conductance, stable isotopes, and three metrics of biodiversity, we investigated the effects of Douglas‐fir (Pseudotsuga menziesii) encroachment and removal at the ecosystem scale across 3 years in a northern California woodland. We found that heavily encroached stands had the highest water potential and often the lowest stomatal conductance, compared to moderately encroached and open stands. Xylem water stable isotopes indicated that oaks and Douglas‐firs were likely not directly competing for water, as oaks appeared to use a relatively deeper water source. Under certain climatic conditions, heavily encroached oaks were more vulnerable to water stress than oaks in open or moderately encroached stands. Following low‐intensity conifer removal, thinned stands had slightly lower predawn water potential and higher gas exchange compared to unthinned stands, particularly under dry conditions. For ecosystem biodiversity, understory plant and bird diversity did not meaningfully vary with encroachment or thinning, but mammal diversity was greater in encroached stands compared to open stands. Findings from this work demonstrate that negative impacts of conifer encroachment on oaks are not due to increased competition for water, conifer removal is physiologically beneficial for shaded oaks, and that heavier thinning treatments are likely needed to yield long‐term responses and influence biodiversity.

Diversity and cross-species transmission of viruses in a remote island ecosystem: implications for wildlife conservation.

The ability of viruses to emerge in new species is influenced by aspects of host biology and ecology, with some taxa harbouring a high diversity and abundance of viruses. However, how these factors shape virus diversity at the ecosystem scale is often unclear. To better understand the pattern and determinants of viral diversity within an ecosystem, and to describe the novel avian viruses infecting an individual avian community, we performed a metagenomic snapshot of the virome from the entire avian community on remote Pukenui/Anchor Island in Aotearoa New Zealand. Through total RNA sequencing of 18 bird species, we identified 50 avian viruses from 9 viral families, of which 96% were novel. Of note, passerines (perching birds) exhibited high viral abundance and diversity, with viruses found across all nine viral families identified. We also identified numerous viruses infecting seabirds on the Island, including megriviruses, hepaciviruses, and hepatoviruses, while parrots exhibited an extremely low diversity of avian viruses. Within passerines, closely related astroviruses and hepatoviruses, and multiple identical hepe-like viruses, were shared among host species. Phylogenetic reconciliation analysis of these viral groups revealed a mixture of co-divergence and cross-species transmission, with virus host-jumping relatively frequent among passerines. In contrast, there was no evidence for recent cross-species virus transmission in parrots or seabirds. The novel pegiviruses and a flavivirus identified here also pose intriguing questions regarding their origins, pathogenicity, and potential impact on vertebrate hosts. Overall, these results highlight the importance of understudied remote island ecosystems as refugia for novel viruses, as well as the intricate interplay between host ecology and behaviour in shaping viral communities.

Birch (Betula pubescens Ehrh.) Encroachment Alters Contribution of Plant Functional Groups to Ecosystem Carbon Cycling in a Rewetted Bog.

Rewetted bogs with high water levels (WL) and mire-specific vegetation are crucial carbon (C) sinks, but their function might be threatened by tree encroachment, a phenomenon widespread in the northern hemisphere that often coincides with low WL. This might impact C cycling both at the ecosystem and microform scale in multiple ways, but so far, data are lacking. We established two sites in the same former peat extraction area, one showing permanently high WL and mire-specific vegetation (open site, OS), while the other one has more fluctuating WL and a dense birch (Betula pubescens Ehrh.) population (tree site, TS). We measured the carbon dioxide (CO2) exchange at ecosystem (eddy covariance) and plot scale (chamber measurements) for 1 year to clarify the differences between the sites and the impact of birch encroachment on the contribution of the different bog-specific microforms and the trees to the ecosystem's CO2 balance. Overall, the OS had a CO2 balance of -262.4 ± 7.8 g CO2-C m-2 year-1 indicating CO2 uptake, while the TS was close to neutral (-28 ± 5.1 g CO2-C m-2 year-1). The smaller uptake at the TS was caused by higher (151%) ecosystem respiration, while gross primary production was 14% higher. However, the microform contributions to C uptake strongly differed: At the OS, both hummocks and hollows showed net uptake, while at the TS, most C (52%) was assimilated by the birches and the understory was a net CO2 source. This indicates a loss of peat C from the TS, while the successfully rewetted site was accumulating new peat. Accounting for plot-scale CH4 fluxes, both sites were a weak source of greenhouse gases, but a distinctly stronger C sink occurred at the OS. Our data show the possibility of increasing C removal from the atmosphere by full rewetting and the establishment of mire-specific vegetation.

Source vs sink limitations on tree growth: from physiological mechanisms to evolutionary constraints and terrestrial carbon cycle implications.

The potential for widespread sink-limited plant growth has received increasing attention in the literature in the past few years. Despite recent evidence for sink limitations to plant growth, there are reasons to be cautious about a sink-limited world view. First, source-limited vegetation models do a reasonable job at capturing geographic patterns in plant productivity and responses to resource limitations. Second, from an evolutionary perspective, it is nonadaptive for plants to invest in increasing carbon assimilation if growth is primarily sink-limited. In this review, we synthesize the potential evidence for and underlying physiology of sink limitation across terrestrial ecosystems and contrast mechanisms of sink limitation with those of source-limited productivity. We highlight evolutionary restrictions on the magnitude of sink limitation at the organismal level. We also detail where mechanisms regulating sink limitation at the organismal and ecosystem scale (e.g. the terrestrial carbon sink) diverge. Although we find that there is currently no direct evidence for widespread organismal sink limitation, we propose a series of follow-up growth chamber manipulations, systematized measurements, and modeling experiments targeted at diagnosing nonadaptive buildup of excess nonstructural carbohydrates that will help illuminate the prevalence and magnitude of organismal sink limitation.

Bioacoustic and Ecoacoustic Data in Audiovisual Core

Audiovisual Core (Audiovisual Core Maintenance Group 2023), is the TDWG standard for metadata related to biodiversity multimedia. The Audiovisual Core Maintenance Group has been working to expand the standard to provide the terms necessary for handling sound recordings. Audiovisual Core can now handle acoustic metadata related to biodiversity from single species (bioacoustics) to the ecosystem scale (ecoacoustics). Bioacoustics The Natural History Museum, London has a significant collection of recorded insect sounds (Ragge and Reynolds 1998) that are often directly linked to museum specimens (Fig. 1). The sound collection has previously been digitised and made available electronically through the BioAcoustica project (Baker et al. 2015). The BioAcoustica platform allows for annotation of audio files with tags including "Call" for deliberate sound made by an organism, "Voice Introduction" for metadata, and "Extraneous Noise." These boundaries are defined by their start and end times (in seconds) relative to the start of the file (Fig. 2). Ecoacoustics Ecoacoustics deals with the sounds present within an entire soundscape or ecosystem. The calls of individual species form the biological part of the soundscape (biophony) alongside sounds produced by non-living natural sources (geophony) and humans (anthropophony). Individual components are often defined by date and time boundaries, and sometimes by upper and lower frequency limits (Fig. 3). Regions of Interest The recently added concept of a "Region of Interest" (ROI) allows for the annotation of sound files, identifying multiple regions within a single recording with time and/or frequency bounds. However, the vocabulary of ROI*1 is not just intended for sounds. Equivalent terms also allow for regions to be specified with images and videos. The use of well-defined annotations has the potential to generate large amounts of training data for machine learning models and provide a standard for generating observation records from these models (e.g., BirdNet, see Kahl et al. 2021), which can be verified by linking them to audio segments within a much larger recording. The development of a metadata standard for regions of interest has several interesting possibilities, including linking multiple observation records to a single soundscape recording (the recording acts similarly to a voucher specimen) and aggregating regions across multiple datasets to create larger corpora for training machine learning models.

Drought conditions disrupt atmospheric carbon uptake in a Mediterranean saline lake

Abstract. Inland saline lakes play a key role in the global carbon cycle, acting as dynamic zones for atmospheric carbon exchange and storage. Given the global decline of saline lakes and the expected increase of periods of drought in a climate change scenario, changes in their potential capacity to uptake or emit atmospheric carbon are expected. Here, we conducted continuous measurements of CO2 and CH4 fluxes at the ecosystem scale in an endorheic saline lake of the Mediterranean region over nearly 2 years. Our focus was on determining net CO2 and CH4 exchanges with the atmosphere under both dry and flooded conditions, using the eddy covariance (EC) method. We coupled greenhouse gas flux measurements with water storage and analysed meteorological variables like air temperature and radiation, known to influence carbon fluxes in lakes. This extensive data integration enabled the projection of the net carbon flux over time, accounting for both dry and wet conditions on an interannual scale. We found that the system acts as a substantial carbon sink by absorbing atmospheric CO2 under wet conditions. In years with prolonged water storage, it is predicted that the lake's CO2 assimilation capacity can surpass 0.7 kg C m2 annually. Conversely, during extended drought years, a reduction in CO2 uptake capacity of more than 80 % is expected. Regarding CH4, we measured uptake rates that exceeded those of well-aerated soils such as forest soils or grasslands, reaching values of 0.2 µmol m−2 s−1. Additionally, we observed that CH4 uptake during dry conditions was nearly double that of wet conditions. However, the absence of continuous data prevented us from correlating CH4 uptake processes with potential environmental predictors. Our study challenges the widespread notion that wetlands are universally greenhouse gas emitters, highlighting the significant role that endorheic saline lakes can play as a natural sink of atmospheric carbon. However, our work also underscores the vulnerability of these ecosystem services in the current climate change scenario, where drought episodes are expected to become more frequent and intense in the coming years.

Food web bioaccumulation model for ecological risk assessment of emerging organic pollutants in marine ecosystems: Principles, advances and challenges

The bioaccumulation and trophic transfer of pollutants in marine ecosystem members determine their ultimate ecological risks. Food web bioaccumulation models are widely used in scientific and regulatory programs to assess the bioaccumulation and ecological risks of pollutants at the ecosystem scale. The food web models are mainly established through concentration- and fugacity-based modeling approaches and include some chemical, food web-related, physiological and environmental factors. The models applied in the “forward approach” predict bioaccumulation and conduct internal exposure level-based ecological risk assessment (IEL-ERA), whereas those in the “reverse approach” are used to back-calculate the IEL-based predicted no-effect concentrations (PNECs) or environmental criteria. However, some challenges still exist in the application of food web model integrated risk assessment, including the lack of standardized/generalized frameworks, the lack of chemical- and species-specific toxicokinetic data and internal exposure (or tissue residue)-based toxicity data, and the lack of uncertainty-control methods in model estimation and parameterization. There are urgent requirements to improve models, integrate methods and update study designs in the assessment and prediction of “system-scale risks” of marine emerging organic pollutants.

Widespread forest-savanna coexistence but limited bistability at a landscape scale in Central Africa

Abstract Tropical forest and savanna frequently coexist under the same climatic conditions, which has led to the hypothesis that they could represent alternative ecosystem states, stabilized by internal feedbacks. An implication of this hypothesis is that forest and savanna may be bistable and exhibit tipping behavior in response to changing conditions. However, we pose that the local presence of forest and savanna within coexistence landscapes is not sufficient evidence that these are alternative stable states at larger ecosystem scales. Therefore, we explore forest-savanna coexistence and bistability at landscape scale in Central Africa. Using remote sensing data on tree cover, we classify 0.1° × 0.1° (approx. 10 × 10 km) landscapes as homogeneous forest, homogeneous savanna, or coexistence, and analyze the roles of climate, topography and soil sand content in driving their distributions. We find that local coexistence of forest and savanna within landscapes is common and occurs for the whole range of mean annual precipitation in our study area. At low precipitation, however, coexistence increases with topographic roughness and is therefore likely driven by local redistribution of resources rather than internal feedbacks. Coexistence within intermediate and high precipitation landscapes remains unexplained by the studied variables, and may be caused either by heterogeneity in unmeasured drivers or by feedback-driven bistability. At landscape scale, the precipitation ranges for which homogeneous forest and savanna occur have only limited overlap, and this overlap can be largely explained by other external drivers, such as seasonality, soil sand content, and topography. This lack of evidence that homogeneous forest and savanna in Central Africa are alternative ecosystem states at this landscape scale means that transitions between them may be mostly local, resulting in coexistence states. Therefore, we conclude that the likelihood of large-scale tipping between homogeneous forest and savanna ecosystems may be lower than previously thought.

The Ecosystem Ecology of Coral Reefs Revisited

Early studies in coral reefs showed that simple measurements of ecosystem metabolism (primary production and ecosystem respiration) were useful for understanding complex reef dynamics at an ecosystem scale. These studies also helped establish the field of ecosystem ecology, but contemporary coral reef ecology has shifted away from these origins. In this manuscript, I describe the historical development of a theory of ecosystem metabolism that was foundational for the discipline of ecosystem ecology, and I update this theory to fully incorporate dynamics on coral reefs (and all ecosystems). I use this updated theory to (a) identify important controls on coral reef processes and (b) provide a rationale for patterns of coral reef carbon dynamics that allow me to generate hypotheses of coral reef ecosystem production. I then use existing data to broadly evaluate these hypotheses. My findings emphasize the importance of integrating measurements of ecosystem metabolism with current approaches to improve the development of theory and the efficacy of conservation and management of coral reefs.

Global patterns in vegetation accessible subsurface water storage emerge from spatially varying importance of individual drivers

Abstract Vegetation roots play an essential role in regulating the hydrological cycle by removing water from the subsurface and releasing it to the atmosphere. However, the present understanding of the drivers of ecosystem-scale root development and their spatial variability globally is limited. This study investigates the varying roles of climate, landscape, and vegetation on the magnitude of root zone storage capacity ( S r ) worldwide, which is defined as the maximum volume of subsurface moisture accessible to vegetation roots. To this aim, we quantified S r and evaluated 21 possible climate, landscape, and vegetation controls for 3612 river catchments worldwide using a random forest machine learning model. Our findings reveal climate as primary, but spatially varying, driver of ecosystem scale S r with landscape and vegetation characteristics playing a minor role. More specifically, we found the mean inter-storm duration as most dominant control of S r globally, followed by mean temperature, mean precipitation, and mean topographic slope. While the inter-storm duration, temperature, and slope exhibit a consistent relation with S r globally, the relation between precipitation and S r varies spatially. Based on this spatial variability, we classified two different regimes: precipitation driven and energy limited. The precipitation-driven regime exhibits a positive relation between precipitation and S r for precipitation of up to 3 mm d − 1 , above which the relation flattens and eventually becomes negative. The energy-limited regime exhibits a strictly negative relation between precipitation and S r . Using the random forest model based on these three dominant climate variables and the landscape variable slope, we generated a global gridded dataset of S r , which closely resembles other global datasets of root characteristics. This suggests that our parsimonious approach based on four globally available variables to estimate S r on a global scale has the potential to be readily and easily integrated into the parameterization of S r in global hydrological and land surface models. This may enhance the accuracy of global predictions of land–atmosphere exchange fluxes and hydrological extremes by providing a robust representation of both spatial and temporal variability in vegetation root characteristics.

Water quality–fisheries tradeoffs in a changing climate underscore the need for adaptive ecosystem–based management

Changes driven by both unanticipated human activities and management actions are creating wicked management landscapes in freshwater and marine ecosystems that require new approaches to support decision-making. By linking a predictive model of nutrient- and temperature-driven bottom hypoxia with observed commercial fishery harvest data from Lake Erie (United States-Canada) over the past century (1928-2022) and climate projections (2030-2099), we show how simple, yet robust models and routine monitoring data can be used to identify tradeoffs associated with nutrient management and guide decision-making in even the largest of aquatic ecosystems now and in the future. Our approach enabled us to assess planned nutrient load reduction targets designed to mitigate nutrient-driven hypoxia and show why they appear overly restrictive based on current fishery needs, indicating tradeoffs between water quality and fisheries management goals. At the same time, our temperature results show that projected climate change impacts on hypoxic extent will require more stringent nutrient regulations in the future. Beyond providing a rare example of bottom hypoxia driving changes in fishery harvests at an ecosystem scale, our study illustrates the need for adaptive ecosystem-based management, which can be informed by simple predictive models that can be readily applied over long time periods, account for tradeoffs across multiple management sectors (e.g., water quality, fisheries), and address ecosystem nonstationarity (e.g., climate change impacts on management targets). Such approaches will be critical for maintaining valued ecosystem services in the many aquatic systems worldwide that are vulnerable to multiple drivers of environmental change.

Global influence of soil texture on ecosystem water limitation

Low soil moisture and high vapour pressure deficit (VPD) cause plant water stress and lead to a variety of drought responses, including a reduction in transpiration and photosynthesis1,2. When soils dry below critical soil moisture thresholds, ecosystems transition from energy to water limitation as stomata close to alleviate water stress3,4. However, the mechanisms behind these thresholds remain poorly defined at the ecosystem scale. Here, by analysing observations of critical soil moisture thresholds globally, we show the prominent role of soil texture in modulating the onset of ecosystem water limitation through the soil hydraulic conductivity curve, whose steepness increases with sand fraction. This clarifies how ecosystem sensitivity to VPD versus soil moisture is shaped by soil texture, with ecosystems in sandy soils being relatively more sensitive to soil drying, whereas ecosystems in clayey soils are relatively more sensitive to VPD. For the same reason, plants in sandy soils have limited potential to adjust to water limitations, which has an impact on how climate change affects terrestrial ecosystems. In summary, although vegetation–atmosphere exchanges are driven by atmospheric conditions and mediated by plant adjustments, their fate is ultimately dependent on the soil.

Domesticating the wild through escapees of two iconic mediterranean farmed fish species

Extractive fisheries and marine aquaculture share space and target species. Several regional-scale examples exist of escapees entering wild fisheries landings, yet no study has assessed the influence of aquaculture on landings at an ecosystem scale. We examined the effects of farmed fish escapes on fisheries using FAO data and published escape rates for Gilthead seabream (Sparus aurata) and European seabass (Dicentrarchus labrax). Seabream landings were significantly correlated with the estimated biomass of escaped seabream entering the wild. There was a similar pattern for seabass until 2005, but the overall relationship between landings and escapes was not significant due to the dramatic drop in catches in recent years. We argue that seabass escapees’ relatively high mortality, lower capturability, and minor ‘leaking’ from farms may obscure their influence on landings. Significant positive fisheries regime shifts were detected for both species, matching the onset of aquaculture in the Mediterranean and the period when escapees from aquaculture surpassed landings. Our results suggest that fish escapes of these two iconic species may mask wild stock overexploitation, confound stock assessments, alter genetic diversity, increase the risk of spreading pathogens and parasites, and compete with wild conspecifics while boosting fisheries landings.

Long-term alien marsh grass in China brings high carbon uptake capacity but cannot sustain high-temperature weather

Coastal wetlands, crucial in the global carbon cycle, face increasing challenges brought by extreme climate events, particularly high temperatures above plant tolerance thresholds. These conditions often exert great impact on plant, thereby potentially reducing overall ecosystem productivity. However, it has been observed that alien species, typically exhibiting higher productivity compared to native plant. Would plant invasion offset the loss of productivity caused by high-temperature events at ecosystem scale? In this study, we utilized data from 2020 to 2023 in China's Yangtze Estuary to investigate the responses of Spartina alterniflora (alien) and Phragmites australis (native) to high-temperature stress. Our results demonstrate that though the alien vegetation exhibits higher productivity before high temperature events, it experiences significant declines during high temperatures. In average, net ecosystem productivity (NEP) and gross primary productivity (GPP) of alien plant drops by 21.03% overall, with a notable 29.59% reduction during Neap tide. In contrast, native vegetation maintains a more stable productivity profile under the same conditions. Spring tide alleviate the negative impact of high temperatures on the alien vegetation, exhibiting a distinct environmental buffering effect. Photosynthetic photon flux density emerged as a crucial factor driving productivity, yet its effectiveness was moderated by aerodynamic conductance for heat transfer (Ga_h). Through the application of the Michaelis-Menten model, we confirmed that both species maintain similar maximum light utilization efficiencies, yet native vegetation demonstrates greater resilience to thermal stress. Additionally, we observed a 33.82% overestimation in productivity by the vegetation photosynthesis model (VPM) under high temperatures, emphasizing the need to refine how Ga_h impacts are integrated, particularly when comparing the resilience of native and alien species. We emphasize necessity of incorporating canopy structure factors into ecological models and underscore the importance of maintaining tidal dynamics for coastal wetland management.

Evaluating variation of respiration:photosynthesis ratio in sagebrush species: Implications for carbon flux modeling

AbstractPlant respiration and photosynthesis are the two main processes influencing carbon (C) flux balance at leaf‐to‐ecosystem scales. The ratio of respiration to photosynthesis (R:A) or carbon use efficiency (CUE) is considered an important trait for determining global carbon storage in the near future. One school of thought assumes that R:A is constant in terrestrial productivity models, irrespective of biomass, climate, and species. Others believe it is variable, although within a limited range. Semiarid systems dominated by woody vegetation, such as sagebrush steppe, have been recognized as potentially important C sinks on regional to global scales in the context of future climate scenarios. Therefore, there is a critical need to study R:A over different organizational scales (i.e., at the leaf, whole plant, and ecosystem scales) to use this approach for future C flux predictions under climate change scenarios. The objective of this study was to compare leaf‐, shrub‐, and ecosystem‐scale R:A among three sagebrush (Artemisia spp.) communities, and to determine how R:A varies throughout the growing season (i.e., early, mid‐, and late summer) among these communities. We measured photosynthesis and respiration monthly in three sagebrush communities spanning a 685‐m elevation gradient at the Reynolds Creek Experimental Watershed and Critical Zone Observatory in southwestern Idaho. Consistent with our expectations, we found large seasonal variations in R and A at all scales, but with differences in A among the three sagebrush communities significant only at the leaf scale. The R:A ratio was not significantly different among the three species at all organizational scales. However, the R:A ratio did vary among months at the leaf level and there was a statistical interaction between species and month at both leaf and shrub levels. Our study indicates that the R:A ratio is generally conservative, although not tightly constrained (range: 0.12–0.77) among three sagebrush species. Therefore, approaches that assume conservative R:A ratios in terrestrial productivity models need to be considered carefully to evaluate the impact of projected climatic changes on future C cycling in shrub‐dominated rangeland ecosystems.