Saprophytic Fungi Research Articles

Control of Helminth Infections in Captive Herbivores: An Overview of Experience

There are numerous challenges associated with helminth control in captive animals. The aim of the present paper is to provide an overview of the research on deworming of captive herbivorous mammals, the associated problems and the solutions sought, in order to derive recommendations for practice in the relevant institutions. The research was conducted by searching electronic internet databases and following the bibliographies in the published articles. The articles found are presented in summarized form. Most of the results relate to herbivores of the family Bovidae, followed by the families Cervidae, Equidae, Elephantidae, Camelidae and Giraffidae. Systematic data are presented on the types of anthelmintics used, dosages and application regimens for different animal species. Anthelmintics were administered at doses similar to or even higher than those used in farm animals, with no evidence of side effects. Treatment results often depended on the animal and parasite species. Incomplete cure, reinfection, and resistance to anthelmintics were the most common problems in the field. Based on the literature reviewed, the optimal prevention measures include the following: quarantine of newly arrived animals; daily or as intensive as possible cleaning of droppings; regular change of substrate in the enclosures; and monitoring of possible infections and their qualitative and quantitative composition (monthly or at least every two months). For treatments and monitoring effectiveness, recommendations include the following: individual assessment of the need for treatment; selective choice of anthelmintics; post-treatment examination between the 10th and 14th day after deworming; carrying out a group treatment after a preliminary drug effect test; conducting mass deworming only in case of a significant increase in fecal egg counts, highly pathogenic helminth species and a deterioration in the condition of the animals. In the future, more attention should be paid to new approaches such as biological control by saprophytic fungi or natural compounds as an alternative to anthelmintics. This would help minimize the use of anthelmintics, protect refugia and allow animals to remain healthy by maintaining a balance with the low levels of parasites present.

Feline sporotrichosis: occurrence in the Metropolitan Region of the municipality of Recife and anatomical distribution of lesions on cats’ body

Sporotrichosis is a fungal infection of worldwide importance caused by a saprophyte fungus of the genus Sporothrix. The objective of this study was to report the occurrence of feline sporotrichosis in the Metropolitan Region of the city of Recife and the anatomical distribution of lesions on the bodies of cats. Stray cats (n=100) with suggestive sporotrichosis lesions were examined. Material from the lesion was collected from all patients using an imprint and/or sterile swab for cytology. The material was placed on a glass slide and stained using rapid panoptic staining. Data on the localization of each skin lesion were recorded, and cigar-shaped yeast structures were searched at the microscopical examination. A heat map graphically represented the anatomical distribution of each lesion. In 70% (70/100) of samples were visualized fungal structure compatible with Sporothrix spp. There was a predominance of positive males (?2=6.691; p=0.0097). Skin lesions related to Sporothrix spp. infections were unevenly distributed throughout the animal's body. Based on the interpolation of data, the chance for detecting lesions was higher on the nose, anterior paw, and ears than on other body sites (H=40.0043; p=0.0000). Because of the high positivity in these cats, measures of health vigilance are imperative to reduce the risk of animal and human infection.

Fungal community characteristics of the last remaining habitat of three paphiopedilum species in China.

Paphiopedilum armeniacum, Paphiopedilum wenshanense and Paphiopedilum emersonii are critically endangered wild orchids. Their populations are under severe threat, with a dramatic decline in the number of their natural distribution sites. Ex situ conservation and artificial breeding are the keys to maintaining the population to ensure the success of ex situ conservation and field return in the future. The habitat characteristics and soil nutrient information of the last remaining wild distribution sites of the three species were studied. ITS high-throughput sequencing was used to reveal the composition and structure of the soil fungal community, analyze its diversity and functional characteristics, and reveal its relationship with soil nutrients. The three species preferred to grow on low-lying, ventilated and shaded declivities with good water drainage. There were significant differences in soil alkali-hydrolyzed nitrogen and available phosphorus among the three species. There were 336 fungal species detected in the samples. On average, there were different dominant groups in the soil fungal communities of the three species. The functional groups of soil fungi within their habitats were dominated by saprophytic fungi and ectomycorrhizae, with significant differences in diversity and structure. The co-occurrence network of habitat soil fungi was mainly positive. Soil pH significantly affected soil fungal diversity within their habitats of the three paphiopedilum species. The study confirmed that the dominant groups of soil fungi were significantly correlated with soil nutrients. The three species exhibit comparable habitat inclinations, yet they display substantial variations in the composition, structure, and diversity of soil fungi. The fungal functional group is characterized by a rich presence of saprophytic fungi, a proliferation of ectomycorrhizae, and a modest occurrence of orchid mycorrhizae. The symbiotic interactions among the soil fungi associated with these three species are well-coordinated, enhancing their resilience against challenging environmental conditions. There is a significant correlation between soil environmental factors and the composition of soil fungal communities, with pH emerging as a pivotal factor regulating fungal diversity. Our research into the habitat traits and soil fungal ecosystems of the three wild Paphiopedilum species has established a cornerstone for prospective ex situ conservation measures and the eventual reestablishment of these species in their native landscapes.

Assessment of Trichoderma Species Isolated From Volcanic Soil of a Durian Field in Sisaket Province, Thailand for Plant Growth Promotion and Biocontrol Potential

Trichoderma species are ubiquitous saprophytic fungi commonly found in soil, with potential as fungal biocontrol agents for plant disease control and growth promotion. This research aimed to assess the attributes of Trichoderma sp. as plant growth promoters, focusing on nitrogen fixation, siderophore production, plant nutrient solubilization and indole-3-acetic acid production. Out of 19 isolates tested, 6 (T05, T19, T25, T27, T28 and T33) showed superior plant growth promotion abilities. These isolates were further evaluated for their capacity to enhance the germination of Khao Dawk Mali 105 rice seeds. Seeds were soaked in a suspension of conidia at a concentration of 1×1012 conidia/mL, and germination rates were measured. The germination rate ranged between 77.67 - 86.67 %, statistically significantly higher than the control rate of 33.33 %. Among the isolates, T05 exhibited the highest promotion of plant growth, evidenced by root length (7.27 cm), shoot length (8.50 cm), fresh weight (0.54 g) and dry weight (0.27 g), all significantly different from the control. Additionally, the potential of isolates to inhibit the fungal pathogen Colletotrichum sp. MN-3 was assessed using a dual culture method, with T35 showing the highest inhibition percentage (60.90 %). Morphological classification and nucleotide sequencing of the ITS1-5.8S-ITS2 region of rDNA gene identified the isolates as T. harzianum, T. reesei, T. asperellum and T. longibrachiatum. These findings underscore the effectiveness of Trichoderma sp. in promoting plant growth and suppressing plant pathogenic fungi. HIGHLIGHTSSix Trichoderma isolates (T05, T19, T25, T27, T28 and T33) exhibited superior plant growth promotion abilities. These isolates significantly enhanced germination rates of Khao Dawk Mali 105 rice seeds compared to the method. Among the isolates, T05 showed the greatest promotion of plant growth, as evidenced by root length, shoot length, fresh weight and dry weight. Trichoderma isolates demonstrated potential for inhibiting the fungal pathogen Colletotrichum sp. MN-3. Morphological classification divided the Trichoderma sp. into 4 groups, and species identification through nucleotide sequencing revealed T. harzianum, T. reesei, T. asperellum and T. longibrachiatum. GRAPHICAL ABSTRACT

Revealing the Response of Cucumber Soil Microbial Community Composition and Function to Nitrogen Addition in Northern Chinese Greenhouses

At present, the soil of Chinese greenhouses is experiencing severe nitrogen input in the form of fertilizer, which will cause damage to the soil environment and restrict crop growth in the long run. The response of potential functions of microorganisms as drivers of nutrient cycling and material transformation to nitrogen enrichment has rarely been reported in northern vegetable planting systems. Therefore, we set up four cucumber pot experiments with different nitrogen addition rates (0, 258, 516, and 1032 kg N ha−1 yr−1) in the greenhouse. Bacterial and fungal communities were detected by 16S and ITS rRNA gene sequencing, and bacterial and fungal functional groups were predicted using the FAPROTAX and FUNGuild databases. The findings showed that nitrogen addition induced soil acidification (a decrease of 0.25–1.63 units) significantly reduced microbial diversity and changed the community composition of bacteria and fungi. The relative abundance of bacterial functional groups associated with the nitrogen cycle increased significantly when medium and high levels of nitrogen were added. Conversely, the bacterial functional groups involved in the carbon cycle exhibited the opposite pattern. In this study, NO3− and soil pH were the main factors affecting the soil microbial community and its functional groups. Our results highlight that hydrocarbon degradation and saprophytic fungi may play key roles in yield formation during cucumber cultivation in northern solar greenhouses. In general, adopting a fertilization strategy that ensures low-medium nitrogen availability can contribute to the sustainable progress of facility agriculture.

Cascading impacts of nitrogen deposition on soil microbiome and herbivore communities in desert steppes

Human activities in the last century have intensified global nitrogen deposition, resulting in the degradation of ecosystem function and loss of biodiversity worldwide. Nitrogen addition is a crucial method for examining the effects of atmospheric nitrogen deposition on species composition and structure of soil microbiome and biotic community, as exogenous nitrogen inputs can trigger cascading effects on ecosystem functions. In a 6-year experiment, we evaluated the impact of nitrogen addition on soil microbial-plant-insect systems in desert steppes. Our results show that nitrogen addition significantly altered soil microbial composition and ecological function, leading to a decrease in nitrogen-fixing bacteria and an increase in saprophytic fungi. High levels of nitrogen addition increased total plant biomass while decreasing species diversity. Additionally, high nitrogen addition levels suppressed below-ground biomass of gramineae and legumes compared to low nitrogen addition. Nitrogen addition also increased herbivore abundance by altering insect community structure, particularly benefiting chewing pests over sucking pests, thus heightening the risk of biological disasters through trophic cascading effects. Consequently, excessive nitrogen addition may destabilize desert steppe ecosystems by disturbing soil microbial-plant-insect interactions, hindering the maintenance of biotic community diversity and steppe productivity.

Determination of the prevalence of fungi associated with amaranth cultivation in the locality of Kombé, Republic of Congo

Amaranth is a nutrient-rich leafy vegetable. Phytopathogenic fungi are causing major losses in amaranth crop production in the Kombé area. The detection of these phytopathogenic fungi can play an important role. The aim of this study is to assess the abundance of endophytic and saprophytic fungi associated with amaranth cultivation in Brazzaville, with a view to recommending biological control of fungal diseases. The prevalence of fungi associated with amaranth began with a survey, then continued in the laboratory. During the survey, 15 amaranth and soil samples were then collected separately in different stomacher bags, labelled and shipped to the laboratory where they were stored in a refrigerator at 4°C for four (4) weeks for analysis. In the laboratory, endophytic and saprophytic fungi were isolated using the fresh-state inoculation method for endophytic fungi and the suspension-dilution method for saprophytic fungi. The isolated strains were identified by determining their macroscopic and microscopic characteristics. The phytosanitary survey revealed that the most dominant symptom on amaranth plants in Kombé was wilting (42.86%). The results obtained from the distribution of endophyte isolates by colour indicate the presence of 5 isolates of unidentified endophytic fungi obtained from the leaf organ. Through isolation and microscopic analysis of soil saprophytes, six genera of fungi were identified: Botrytis cineara, Rhizoporus sp, Penicillium sp, Mucor sp, Scedospirium sp and Curvularia sp.

Unveiling the Diversity and Ecological Roles of Macrofungi in Ayer Hitam Forest Reserve, Selangor, Malaysia

The biodiversity of macrofungi in remaining lowland dipterocarp forest in highly urbanization pressures is infrequently studied, even though their significant impact on the ecosystem of forested and non-forested habitats. Therefore, this research endeavours to unravel the diversity of macrofungi from different substrates in the Ayer Hitam Forest Reserve located in Selangor, Malaysia. Through a combination of field surveys, the study seeks to contribute valuable insights into the complex relationships between macrofungi and the surrounding habitats where macrofungal community structure was mainly influenced by substrate richness and microclimates. Sporocarps of macrofungi were collected from selected sites using opportunistic sampling methods. A total of 333 sporocarps were obtained and identified based on morphological and molecular analysis. Basidiomycota prevailed in the Ayer Hitam Forest Reserve where 27 species belonging to 14 families were successfully identified. Saprophytic fungi (22 species, 81.5%) dominated the areas, and a small number of mycorrhizal (1 species, 3.7%) and parasitic (4 species, 14.8%) fungi were found. Based on species diversity, order Polyporales is the highest occurrence species in the sampling areas with a Shannon-Weiner Index value of 2.103 and Simpson Index value of 0.954, Evenness Index value of 0.601, making it the most abundant order containing Microporus species, The findings are expected to enhance our knowledge of the biodiversity of macrofungi from different substrates in Ayer Hitam Forest Reserve, which can lead to conservation efforts and promote the ecological significance of macrofungi in tropical forest ecosystems.

Identification and molecular detection of the pathogen of Phalaenopsis leaf yellowing through genome analysis.

Moth orchids (Phalaenopsis spp.) are globally popular ornamental flowers. However, effective management strategies for Phalaenopsis leaf yellowing remain elusive, making the disease a challenging obstacle affecting moth orchids at various growth stages. This disease manifests as collar rot, leaf yellowing, leaf abscission, and eventually, plant death. The lack of effective management strategies is likely attributed to a limited understanding of the disease pathogenesis and pathogen dissemination pathways. Fusarium phalaenopsidis sp. nov. was established in this study to stabilize the classification status of Phalaenopsis leaf yellowing pathogens using molecular and morphological features. The genome of the holotype strain was sequenced and assembled, revealing its genome structures. Analyses of virulence-related elements, including transposon elements, secondary metabolite biosynthetic gene clusters, effectors, and secreted carbohydrate-active enzymes, shed light on the potential roles of three fast core chromosomes in virulence. Two species-specific primers were designed based on unique gene sequences of two virulence-related proteins through comparative genomics and BLAST screening. The specificity of these primers was validated using isolates of F. phalaenopsidis, non-target species in the Fusarium solani species complex, other Fusarium species complexes, and saprophytic fungi. These results are intended to accelerate the identification of the pathogens, facilitate the study of disease pathogenesis, and pave the way for elucidating pathogen dissemination pathways. Ultimately, they aim to contribute to the formulation of effective control strategies against Phalaenopsis leaf yellowing.

Changes in soil microbial community and function across stand age of Cryptomeria japonica var. sinensis plantations in subtropical China

Microbial communities are important influencing factors in soil biogeochemical cycling. Differences in stand age can affect microbial communities and functions by altering soil biochemical characteristics. Studying the changes in soil microbial communities and functions at different ages of Cryptomeria japonica var. sinensis can provide a theoretical basis for the scientific management of plantations. Therefore, we collected soil samples from different soil depths from 7- (7a), 13- (13a), 24- (24a), 33- (33a), and 53-year (53a) C. japonica var. sinensis plantations, to assess the differences in soil biochemical characteristics, soil bacterial and fungal communities, soil enzyme activity, and soil respiration rate. Results showed that as the stand age increases, the ACE and Shannon indices of fungal communities showed an initial increase followed by a decrease, whereas the Chao 1 index showed an increasing trend. The ACE and Shannon indices of bacterial communities did not change with stand age, but the Chao1 index decreased with an increase in stand age. In addition, the fungal ACE and Chao1 indices and bacterial Shannon index were higher at the 0–15 cm depth than at the 15–30 cm depth. Soil microbial community composition varied with stand age and soil depth, including Proteobacteria and Unclassified_k_Fungi relative abundances, and their functional groups' (nitrogen cycling-related bacteria, saprophytic fungi, pathogens, and ectomycorrhizal fungi) relative abundances. In addition, stand age will indirectly affect soil microbial function by influencing soil biochemical characteristics and microbial communities at the 0–15 cm depth, whereas at the 15–30 cm depth, there is no direct or indirect impact on the above indicators. In summary, significant variations exist in soil microbial communities and their functions across stand ages, and these differences will further vary between soil depths. Our research contributes to a better understanding of the impact of different ages of afforestation on soil biogeochemical cycling, providing valuable microbial information for the sustainable management of C. japonica var. sinensis forests in the future.

Advances in the understanding of talaromycosis in HIV-negative patients (especially in children and patients with hematological malignancies): A comprehensive review.

Talaromyces marneffei (T. marneffei) stands out as the sole thermobiphasic fungus pathogenic to mammals, including humans, within the fungal community encompassing Ascomycota, Eurotium, Eurotiumles, Fungiaceae, and Cyanobacteria. Thriving as a saprophytic fungus in its natural habitat, it transitions into a pathogenic yeast phase at the mammalian physiological temperature of 37°C. Historically, talaromycosis has been predominantly associated with human immunodeficiency virus (HIV)/acquired immunodeficiency syndrome (AIDS), classified among the three primary opportunistic infections linked with AIDS, alongside tuberculosis and cryptococcosis. As advancements are made in HIV/AIDS treatment and control measures, the incidence of talaromycosis co-infection with HIV is declining annually, whereas the population of non-HIV-infected talaromycosis patients is steadily increasing. These patients exhibit diverse risk factors such as various types of immunodeficiency, malignant tumors, autoimmune diseases, and organ transplantation, among others. Yet, a limited number of retrospective studies have centered on the clinical characteristics and risk factors of HIV-negative talaromycosis patients, especially in children and patients with hematological malignancies, resulting in an inadequate understanding of this patient cohort. Consequently, we conducted a comprehensive review encompassing the epidemiology, pathogenesis, risk factors, clinical manifestations, diagnosis, treatment, and prognosis of HIV-negative talaromycosis patients, concluding with a prospectus of the disease's frontier research direction. The aim is to enhance comprehension, leading to advancements in the diagnosis and treatment rates for these patients, ultimately improving their prognosis.

Draft genome sequence of two Aspergillus aculeatus isolated from cashew nuts from coastal Kenya.

Aspergillus aculeatus is a common saprophyte and ubiquitous fungus belonging to section Nigri. They produce diverse secondary metabolites which are important in biological processes and industrial applications. We present the draft genome sequences of two A. aculeatus isolated from cashew nuts from coastal Kenya.

In Situ Antimicrobial Properties of Sabinene Hydrate, a Secondary Plant Metabolite.

The objective of this research was to investigate natural products for their potential against pathogenic microorganisms. Sabinene hydrate (SH), a monoterpenoid, is synthesised by numerous different plants as a secondary metabolite. At present, there is a lack of definite investigations regarding the antimicrobial activity of SH itself and its different isomers. The antimicrobial effects of commercially available SH (composed mainly of trans-isomer) were evaluated within a range of concentrations in three types of contact tests: solid and vapor diffusion and the macro-broth dilution method. Moreover, the effects of SH on the rate of linear growth and spore germination were also examined. Ethanolic SH solutions were tested against an array of microorganisms, including blue-stain fungi (Ceratocystis polonica, Ophiostoma bicolor, O. penicillatum), frequently originating from bark beetle galleries; three fungal strains (Musicillium theobromae, Plectosphaerella cucumerina, and Trichoderma sp.) isolated from a sapwood underneath bark beetle galleries (Ips typographus) on spruce (Picea abies) stems; Verticillium fungicola, isolated from diseased I. typographus larvae; two Gram-positive bacteria (Bacillus subtilis and Staphylococcus aureus), two Gram-negative bacteria (Escherichia coli and Pseudomonas aeruginosa); five yeasts (Candida albicans, C. krusei, C. parapsilosis, Saccharomyces cerevisiae, and Rhodotorula muscilaginosa), and two saprophytic fungi (Aspergillus niger and Penicillium notatum). In solid agar disc diffusion tests, Gram-positive bacteria exhibited greater susceptibility to SH than Gram-negative bacteria, followed by yeasts and fungi. The most resistant to SH in both the disc diffusion and broth macro-dilution methods were P. aeruginosa, A. niger, and Trichoderma sp. strains. Blue-stain fungi and fungi isolated from the Picea sapwood were the most resistant among the fungal strains tested. The minimum inhibition concentrations (MICs) generated by SH and determined using a disc volatilization method were dependent on the fungal species and played an important role in the development of microorganism inhibition. The two Gram-positive bacteria, B. subtilis and S. aureus (whose MICs were 0.0312 and 0.0625 mg/mL, respectively), were the organisms most susceptible to SH, followed by the Gram-negative bacterium, E. coli (MIC = 0.125 mg/mL) and two yeasts, C. albicans and C. kruei (MIC was 0.125 mg/mL and 0.25 mg/mL, respectively). C. parapsilosis (MIC = 0.75 mg/mL) was the yeast most resistant to SH. The investigation of antimicrobial properties of plant secondary metabolites is important for the development of a new generation of fungicides.

Diversity and Composition of Fungicolous Fungi Residing in Macrofungi from the Qinling Mountains.

Sporocarps of macrofungi support other diverse fungal species that are termed fungicolous fungi. However, the external environmental factors that affect the diversity and composition of fungicolous fungal communities remains largely unknown. In this study, the diversities, composition, and trophic modes of fungicolous fungal communities residing in host macrofungi from diverse habitats in the Qinling Mountains were analyzed. Additionally, the number of carbohydrate-active enzymes (CAZymes) encoded by saprophytic, pathogenic, and symbiotic fungi was also quantified and compared. The results revealed that the diversity and composition of fungicolous fungal communities varied with months of collection and the habitats of host fungi, and saprophytic fungi were more abundant on wood than on the ground. Meanwhile, it was also found that saprophytic fungi possessed higher abundances of cell-wall-degrading enzymes than pathogenic or symbiotic fungi. Based on the above findings, it was hypothesized that the greater abundance of saprophytic fungi on wood compared to the ground may be due to their possession of a more diverse array of enzymes capable of degrading wood cell walls, thereby allowing for more efficient nutrient acquisition from decaying wood.

Antifungal Activity of Cyperus articulatus, Cyperus rotundus and Lippia alba Essential Oils against Aspergillus flavus Isolated from Peanut Seeds.

Aspergillus flavus is a cosmopolitan saprophytic fungus that infests several foodstuffs and is associated with adverse effects in humans. In Senegal, significant losses of groundnut production are mainly due to contamination caused by this species. This study evaluated in vitro antifungal activities of Cyperus articulatus, Cyperus rotundus and Lippia alba essential oils against A. flavus isolated from peanut seeds. Essential oils obtained by hydrodistillation of rhizomes of the two Cyperus species and leaves of L. alba were analyzed with GC-DIF and GC-MS. The essential oil yields from C. articulatus, C. rotundus and L. alba were 1.1%, 1.3% and 1.7%, respectively. These three samples had the following chemotypes: (i) mustakone (21.4%)/eudesma-4(15)-7-dien-1β-ol (8.8%)/caryophyllene oxide (5.9%), (ii) caryophyllene oxide (25.2%)/humulene epoxyde 2 (35.0%) and (iii) geranial (46.6%)/neral (34.6%). The three oils tested inhibited the growth of A. flavus at concentrations between 100 and 1000 ppm. The L. alba oil was the most effective with total clearance of A. flavus on PDA. For the essential oils of C. rotundus (93.65%) and C. articulatus (78.11%), the highest inhibition rates were obtained with a 1000 ppm dose. Thus, L. alba oil could be used safely as an effective protector of groundnuts against A. flavus.

Interaction of Capnodium alfenasii with extrafloral nectaries of Azadirachta indica.

Sooty moulds are saprophytic epiphytic fungi that grow mostly on insect secretions, but they can also be associated with plant secretions. In this study, we aimed to describe de interaction of Capnodium alfenasii sooty mould with the extrafloral shoot nectaries of Azadirachta indica. Anatomical and histochemical studies were carried out on serial sections of extrafloral shoot nectaries of A. indica without and with C. alfenasii infestation. The total soluble sugar content of the secreted nectar was determined, and the conidial germination of the fungus in distilled water and in dextrose and nectar solutions was evaluated. The shoot nectaries of A. indica are elongated structures that occur in pairs near the base of the petiole. The exuded nectar contains an average of 534.8µg of total soluble sugars per µL of nectar and provides ideal conditions for conidial germination and fungal growth. C. alfenasii hyphae grow on the nectary, penetrate through breaks in the cuticle, travel under the cuticle and penetrate the secretory tissue by inter- and intracellular routes. The present report is the first to describe the interaction of C. alfenasii with the A. indica nectary, including the penetration of hyphae into nectariferous tissues and the plant defence mechanisms.

Microsporum canis and Sporothrix schenckii: Fungi Causing Skin Infections in Cats

Companion animals such as cats help to reduce stress among people as they delight their owners in their ways. Good management and hygiene practices of pets help in keeping them in a healthy condition. Nevertheless, since fungal infection develops rapidly, there is a high tendency for them to get infected. The paucity of data regarding skin mycoses among cats in Malaysia leads to this study. Private veterinary clinics from the Central Region of Peninsular Malaysia were approached for participation in this study. Sampling was conducted for one year, collecting hair plucked, skin scrapings, and swabs from lesions of the cats with skin problems and inoculating onto Sabouraud Dextrose Agar media. Diagnosing the fungal colony was conducted through a direct examination method using lactophenol cotton blue stain and molecular identification of the isolates using polymerase chain reaction targeting the fungi species’ internal transcribed spacer region and β-tubulin gene. Of the 127 cats, 93 were positively infected, mainly with Microsporum canis (n = 38) and Sporothrix schenckii (n = 26). Saprophytic fungi detected on cats were Alternaria sp., Aspergillus sp., Candida sp., Chaetomium sp., Chrysosporium sp., Curvularia sp., Fusarium sp., Geotrichum sp., Penicillium sp., Talaromyces sp., Trichoderma sp., Trichosporon sp., and Xylaria sp. This finding represents the number of cats infected with fungal dermatitis in Selangor, Negeri Sembilan, the Federal Territory of Kuala Lumpur, and Putrajaya.

Characteristics of the Perianthic Endophytic Fungal Communities of the Rare Horticultural Plant Lirianthe delavayi and Their Changes under Artificial Cultivation.

Flower endophytic fungi play a major role in plant reproduction, stress resistance, and growth and development. However, little is known about how artificial cultivation affects the endophytic fungal community found in the tepals of rare horticultural plants. In this research, we used high-throughput sequencing technology combined with bioinformatics analysis to reveal the endophytic fungal community of tepals in Lirianthe delavayi and the effects of artificial cultivation on the community composition and function of these plants, using tepals of L. delavayi from wild habitat, cultivated campus habitat, and cultivated field habitat as research objects. The results showed that the variety of endophytic fungi in the tepals of L. delavayi was abundant, with a total of 907 Amplicon sequencing variants (ASVs) obtained from all the samples, which were further classified into 4 phyla, 23 classes, 51 orders, 97 families, 156 genera, and 214 species. We also found that artificial cultivation had a significant impact on the community composition of endophytic fungi. Although there was no significant difference at the phylum level, with Ascomycota and Basidiomycota being the main phyla, there were significant differences in dominant and unique genera. Artificial cultivation has led to the addition of new pathogenic fungal genera, such as Phaeosphaeria, Botryosphaeria, and Paraconiothyrium, increasing the risk of disease in L. delavayi. In addition, the abundance of the endophytic fungus Rhodotorula, which is typical in plant reproductive organs, decreased. Artificial cultivation also altered the metabolic pathways of endophytic fungi, decreasing their ability to resist pests and diseases and reducing their ability to reproduce. A comparison of endophytic fungi in tepals and leaves revealed significant differences in community composition and changes in the endophytic diversity caused by artificial cultivation. To summarize, our results indicate that endophytic fungi in the tepals of L. delavayi mainly consist of pathogenic and saprophytic fungi. Simultaneously, artificial cultivation introduces a great number of pathogenic fungi that alter the metabolic pathways associated with plant resistance to disease and pests, as well as reproduction, which can increase the risk of plant disease and reduce plant reproductive capacity. Our study provides an important reference for the conservation and breeding of rare horticultural plants.

Response of Soil Fungal Community in Coastal Saline Soil to Short-Term Water Management Combined with Bio-Organic Fertilizer

This study aimed to elucidate the response of soil microbial communities to saline soil amelioration via biological organic fertilizer. A year-long experiment was conducted on coastal saline soil, employing water and fertilizer strategies. Three treatments were compared: dry field (control, CK), paddy field (W), and combined dry and irrigated fields with biological organic fertilizer (BW). Soil DNA was extracted and sequenced using high-throughput methods, revealing significant reductions in soil electrical conductivity (EC) and pH with W and BW treatments. Moreover, the BW treatment notably increased soil organic carbon content by 17.2%, as well as soil urease and alkaline phosphatase activity. Fungal community richness increased, with the BW treatment showing a 36% rise in the ACE index and a 24% increase in the Shannon index, while the Simpson index decreased by 59%. Dominant fungal phyla were Ascomycota, Mortierellomycota, and Basidiomycota, with Basidiomycota prevailing at the genus level. Redundancy analysis (RDA) indicated that soil pH, EC, and organic carbon were key determinants of fungal community distribution, with the BW treatment correlating negatively with pH and salt and positively with soil organic carbon (SOC). Fungal functional groups varied among treatments, with saprophytic fungi predominating, but the BW treatment showed a higher relative abundance of animal pathogenic fungi. In summary, the integration of biological organic fertilizer with flooding ameliorates soil properties and influences the changes in soil fungal community structure and function in the short term. These results could enhance the scientific basis for the efficient utilization and development of saline soil resources in coastal areas.

Screening for the economic production of hydrolytic enzymes from locally-isolated fungi

Background Enzymes are complex proteins serving as biological catalysts to facilitate reactions in mild and environment-friendly conditions. Saprophytic fungi have long been harnessed for the efficient production of several industrially-significant enzymes whose market is still growing to cope with the increase in demand and natural resources’ depletion. Objective This investigation was performed with respect to the economic viewpoint of terrestrial fungi utilization and their hydrolytic enzymes’ biosynthetic potential. Materials and methods Several terrestrial fungi were isolated, cultivated on cheap agricultural wastes, and evaluated for industrial relevance. Solid-state fermentation was conducted to further boost the economic value and sustainability. The enzymatic productivity was estimated through solid-phase radial diffusion correlating the zones’ diameters to the enzymatic activity. Results and conclusion Six soil fungi were isolated, five belonging to the order Eurotiales and one to Mucorales. The molds belonged to four different genera; Aspergillus sydowii, Aspergillus versicolor, Aspergillus ustus, Fennelia flavipes (anamorph: Aspergillus flavipes), Cunninghamella elegans and Paecilomyces lilacinus. Many of the tested agricultural wastes were able to support the biosynthesis of the explored constitutive enzymes, recording better activity than the standard synthetic medium. Under the test conditions, L-asparaginase and protease were the most frequently detected enzymes while banana and mandarine peels led to the highest enzymes’ activity. In light of the global direction towards sustainability, enzymes can have immense prospects to sustain the industrial sectors innocuously. The cost-effectiveness of the manufacturing processes can be enhanced by accommodating the fiscal challenges for operating conditions. Using agrarian residues as raw material, highly productive enzyme producers, and cheaper solid-state fermentation processes are factors that may contribute to the efficacy, efficiency and economic feasibility of the enzyme-based processes.