Ross Desert Research Articles

Stability of ATP in Antarctic mineral soils

The stability of exogenous ATP in Antarctic Ross desert soils has been assessed using bioluminescence monitoring of ATP-supplemented samples. Under typical east Antarctic dry valley summer conditions (−3 to +15°C), exogenous ATP was degraded with a half-life of between 0.5 and 30 h. The rate of degradation was affected, in order of significance, by soil biomass levels, temperature and water content. Such rapid removal of exogenous ATP strongly suggests that extracellular ATP from lysed cells in cold desiccated soils does not make a significant contribution to the standing ATP titre

Iron-Rich Diagenetic Minerals are Biomarkers of Microbial Activity in Antarctic Rocks

The cold, dry ecosystems of Antarctica have been shown to harbor traces left behind by microbial activity within certain types of rocks, but only two indirect biomarkers of cryptoendolithic activity in the Antarctic cold desert zone have been described to date. These are the geophysical and geochemical bioweathering patterns macroscopically observed in sandstone rock. Here we show that in this extreme environment, minerals are biologically transformed, and as a result, Fe-rich diagenetic minerals in the form of iron hydroxide nanocrystals and biogenic clays are deposited around chasmoendolithic hyphae and bacterial cells. Thus, when microbial life decays, these characteristic neocrystalized minerals act as distinct biomarkers of previous endolithic activity. The ability to recognize these traces may have potential astrobiological implications because the Antarctic Ross Desert is considered a terrestrial analogue of a possible ecosystem on early Mars.

Microbial fossil record of rocks from the Ross Desert, Antarctica: implications in the search for past life on Mars

Cryptoendolithic microbial communities living within Antarctic rocks are an example of survival in an extremely cold and dry environment. The extinction of these micro-organisms formerly colonizing sandstone in the Mount Fleming area (Ross Desert), was probably provoked by the hostile environment. This is considered to be a good terrestrial analogue of the first stage of the disappearance of possible life on early Mars. To date, only macroscopically observed indirect biomarkers of the past activity of cryptoendoliths in Antarctic rocks have been described. The present paper confirms, for the first time, the existence of cryptoendolith microbial fossils within these sandstone rocks. The novel in situ application of scanning electron microscopy with backscattered electron imaging and simultaneous use of X-ray energy dispersive spectroscopy allowed the clear detection of microfossils left behind by Antarctic endoliths. Careful interpretation of the morphological features of cells, such as preserved cell walls in algae, fungi and bacteria, cytoplasm elements such as chloroplast membranes in algae and organic matter traces, mineral associations, and the spatial context of these structures all point to their identification as cryptoendolith microfossils. This type of investigation will prompt the development of research strategies aimed at locating and identifying the signs that Martian microbiota, probably only bacteria if they existed, may have been left for us to see.

Life, decay and fossilisation of endolithic microorganisms from the Ross Desert, Antarctica

The adaptation and survival of the endolithic microorganisms that colonise the near-surface layer of porous sandstone rock in the Ross Desert (Antarctica) depend upon a precarious equilibrium of biological, geological and climatic factors. Any unfavourable change in external conditions can result in the death and disappearance of microscopic organisms, and this may be followed by trace microfossil formation. The sequence of events leading to the extinction of life in the Antarctic desert is considered to be a terrestrial analogue of the disappearance of possible life on early Mars. The present paper reviews the current state of knowledge on the endolithic microorganisms of the Ross Desert with particular reference to their decay and fossilisation processes. Ideas for in situ further research on this microbial ecosystem are also proposed, including several new microscopy techniques such as CLSM, LTSEM, SEM-BSE and EDS. Preliminary images are presented and it is proposed that, for the first time, such techniques will permit the in situ study of the ecology of Antarctic lithobiontic microorganisms and the identification and characterisation of fossilised traces of past life.

Ecology and biology of microfungi from Antarctic rocks and soils

Cryptoendolithic microbial communities, living in porous sandstone rocks in the McMurdo Dry Valleys (Ross Desert) of Southern Victoria Land, Antarctica, were found within weathered pegmatite rocks in Northern Victoria Land, and the first endemic Antarctic fungal genus Friedmanniomyces endolithicus anam.‐gen. and sp. nov. was isolated from this community. Selected microfungi from these communities and from soil were examined for the production of extracellular enzymes and antibiotic substances. The cryptoendolithic strain CCFEE 5001 was particularly remarkable for consistent glycosidase activity, coupled with barely detectable growth. Chitinase activity was highest in the soil mi‐crofungus Verticillium cfr. lecanii (CCFEE 5003). This strain and its purified chitinase were active on Mucor plumbeus, Cladospori‐um cladosporioides, Aspergillus versicolor, and Penicillium verrucosum, producing mycelial damage and cell lysis. The strain CCFEE 5020, isolated from rocks, showed antibiotic activity against Pseudomonas putida, Sarcina sp., Bacillus subtilis, and Escherichia coli, under the test conditions. Good antibiotic activity was produced in the temperature range of 5° to 25° C, pH 4.0, agitation at 700 rpm, and areation at 1.0 vvm, in media containing 0.5% substrate sugar, though this supported only minimal growth. The investigation of soil microfungi in contrasting sites at the BIOTAS area at Edmonson Point indicated that both the presence of bird colonies and changes in temperature and UV exposure obtained by using plastic cloches influenced species composition and density. A ‘Culture Collection of Fungi from Extreme Environments’ (CCFEE) has been established at the University of Tuscia, housing fungal strains from Antarctica.

Growth on Geological Time Scales in the Antarctic Cryptoendolithic Microbial Community

In the process of biogenous weathering of Beacon sandstone in the McMurdo Dry Valleys (Ross Desert), Antarctica, periods of microbial growth, on the time scale of 103-104 years, alternate with sudden exfoliation events. The present study addressed the question of whether microbial growth is continuous between exfoliation events or whether each exfoliation is followed by a period of comparatively rapid growth and then an extended period of steady state. The color intensity (Munsell lightness value) of the rock surface is an indicator of relative age of the crust within the exfoliation cycle, permitting measurement of changes in microbial biomass on a geological time scale. Results indicate that microbial growth is continuous and that exfoliation occurs when the microbial biomass reaches the carrying capacity of the cryptoendolithic habitat.

Biogeochemistry of oxalate in the antarctic cryptoendolithic lichen-dominated community

Cryptoendolithic (hidden in rock) lichen-dominated microbial communities from the Ross Desert of Antarctica were shown to produce oxalate (oxalic acid). Oxalate increased mineral dissolution, which provides nutrients, creates characteristic weathering patterns, and may ultimately influence the biological residence time of the community. Oxalate was the only organic acid detectable by HPLC, and its presence was verified by GC/MS. Community photosynthetic metabolism was involved in oxalate production since rates of (14)C-oxalate production from (14)C02 were higher in light than in dark incubations. Flaking of the sandstone at the level of the lichen-dominated zone a few millimeters beneath the rock surface can be explained by dissolution of the sandstone cement, which was enhanced by Si, Fe, and Al oxalate complex formation. Added oxalate was observed to increase the solubility of Si, Fe, Al, P, and K. Oxalate's ability to form soluble trivalent metal-oxalate complexes correlated with the observed order of metal oxide depletion from the lichen-dominated zone (Mn > Fe > Al). Thermodynamic calculations predict that Fe oxalate complex formation mobilizes amorphous Fe oxides (ferrihydrite) in the lichen-dominated zone, and where oxalate is depleted, ferrihydrite should precipitate. Hematite, a more crystalline Fe oxide, should remain solid at in situ oxalate concentrations. Oxalate was not a carbon source for the indigenous heterotrophs, but the microbiota were involved in oxalate mineralization to CO2, since oxalate mineralization was reduced in poisoned incubations. Photooxidation of oxalate to C02 coupled with photoreduction of Fe(Ill) may be responsible for oxalate removal in situ, since rates of (14)C-oxalate mineralization in dark incubations were at least 50% lower than those in the light. Removal of oxalate from Si, Fe, and Al complexes should allow free dissolved Si, Fe, and Al to precipitate as amorphous silicates and metal oxides. This may explain increased siliceous crust (rock varnish or desert varnish) formation near the surface of colonized rocks were light intensity is greatest.

Long-term productivity in the cryptoendolithic microbial community of the Ross Desert, Antarctica.

Annual gross productivity of the lichen-dominated cryptoendolithic community was calculated from a computer analysis of photosynthetic response based on laboratory measurements of CO2 exchange and three years (1985-1988) of field nanoclimate data. Photosynthetic optimum increased from -3 to 2 degrees C between irradiance levels of 100 and 1500 micromoles photons m-2 s-1, while the upper compensation point rose from 1 to 17 degrees C. The mean yearly total time available for metabolic activity (temperature above -10 degrees C and moisture present) was 771.3 h for horizontal rock, 421.5 h for northeast-oriented sloped rock, and 1042.2 h for a small depression in horizontal rock (the characteristic site of occasional lichen apothecia). The calculated mean gross productivity value for a horizontal rock was 1215 mg C m-2 y-1, and net photosynthetic gain was 606 mg C m-2 y-1. Net ecosystem productivity (annual accretion of cellular biomass) estimated from long-term events amounted to only about 3 mg C m-2 y-1. The difference between these two values may represent the long-term metabolic costs of the frequent dehydration-rehydration and freezing-thawing cycles or of overwintering, and may account for the leaching of organic substances to the rock. The yearly gross productivity of the cryptoendolithic microbial community of the entire Ross Desert area was estimated at approximately 120,000-180,000 kg C. Of this, 600-900 kg C is in microbial biomass, and much of the rest is soluble compounds that leach into the rocks and possibly percolate to the valleys, providing a source of organic matter for lakes, rivers, and soils.

Extreme environments and exobiology.

Ecological research on extreme environments can be applied to exobiological problems such as the question of life on Mars. If life forms (fossil or extant) are found on Mars, their study will help to solve fundamental questions about the nature of life on Earth. Extreme environments that are beyond the range of adaptability of their inhabitants are defined as "absolute extreme". Such environments can serve as terrestrial models for the last stages of life in the history of Mars, when the surface cooled down and atmosphere and water disappeared. The cryptoendolithic microbial community in porous rocks of the Ross Desert in Antarctica and the microbial mats at the bottom of frozen Antarctic lakes are such examples. The microbial communities of Siberian permafrost show that, in frozen but stable communities, long-term survival is possible. In the context of terraforming Mars, selected microorganisms isolated from absolute extreme environments are considered for use in creation of a biological carbon cycle.

Photosynthetic Carbon Incorporation and Turnover in Antarctic Cryptoendolithic Microbial Communities: Are They the Slowest-Growing Communities on Earth?

The main forms of terrestrial life in the cold, desolate Ross Desert of Antarctica are lichen-dominated or cyanobacterium-dominated cryptoendolithic (hidden in rock) microbial communities. Though microbial community biomass (as measured by extractable lipid phosphate) was well within the range of values determined for other microbial communities, community lipid carbon turnover times (calculated from community lipid biomass, rates of community photosynthetic carbon incorporation into lipids versus temperature, and the in situ temperature record) were among the longest on Earth (ca. 20,000 years). When the temperature is above freezing and moisture is present, moderate rates of photosynthesis can be measured. Lichen communities had a psychrophilic temperature response (maximal rate of 4.5 ng of C h m at 10 degrees C) while cyanobacteria communities had maximal rates at 20 to 30 degrees C (3 ng of C h m). These extraordinarily slowly growing communities were not nutrient limited. No significant changes in photosynthetic metabolism were observed upon additions of 100 nM to 1 mM nitrate, ammonium, phosphate, and manganese. These simple, tenacious microbial communities demonstrate strategies of survival under conditions normally considered too extreme for life.

Organic geochemistry of the McMurdo Dry Valleys soil, Antarctica

Organic geochemical studies of 12 soil samples from Wright and Taylor Valleys of the McMurdo Dry Valleys (Ross Desert) in southern Victoria Land, Antarctica, were carried out. Long-chain n-alkanoic acids (C 20−C 34), with predominance of even-carbon numbers, were abundant in all the samples. 3-Hydroxy acids (C 8-C 30) with a predominance of even-carbon numbers were found in the samples, together with 2-, ω- and (ω-1)-hydroxy acids. α,ω-Dicarboxylic acids (C 8-C 31) were detected having near-unity values of carbon preference indices; mainly the C 13 dicarboxylic acid predominated. Visual kerogen revealed that amorphous materials are major components (68–98%) with small amounts of very fine coals (2–32%), but no woody and herbaceous materials. The occurrence of mature isomers of steranes and triterpanes, the paucity of n-alkenoic acids and data from the microscopic study suggest that organic components in the soil samples are derived from erosion of Beacon Supergroup sedimentary rocks and past biological debris containing vascular plan waxes as well as wind-transported cyano-bacterial mats, including cyanobacteria, microalgae, bacteria and fungi, rather than from living organisms.

Water relations and photosynthesis in the cryptoendolithic microbial habitat of hot and cold deserts

Two cryptoendolithic microbial communities, lichens in the Ross Desert of Antarctica and cyanobacteria in the Negev Desert, inhabit porous sandstone rocks of similar physical structure. Both rock types adsorb water vapor by physical mechanisms unrelated to biological processes. Yet the two microbial communities respond differently to water stress: cryptoendolithic lichens begin to photosynthesize at a matric water potential of -46.4 megaPascals (MPa) [70% relative humidity (RH) at 8 degrees C], resembling thallose desert lichens. Cryptoendolithic cyanobacteria, like other prokaryotes, photosynthesize only at very high matric water potentials [> -6.9 MPa, 90% RH at 20 degrees C].

Identification of an Antarctic Endolithic Microorganism by 5S rRNA Sequence Analysis

Summary An Antarctic endolithic Vibrio sp. has been characterized by sequence analysis of 5S rRNA extracted directly from sandstone rock in the Ross Desert of Southern Victoria Land. The bedrock geology of Linnaeus Terrace in the Dry Valley region of Antarctica, where the rock samples were collected, includes sandstone as the most abundant rock type. The formations are hypothesized to be fluvial but of disputed marine versus fluvial origin. The 5S rRNA extracted from the porous sandstone rock which contained a cryptic endolothic community, was sequenced. Cluster analysis and evolutionary tree constructions determined that the sequence was phylogenetically related to those of the Vibrionaceae, specifically a Vibrio spp. of marine origin.

Life on Mars: How it disappeared (if it was ever there)

The cryptoendolithic microbial community in the Ross Desert (McMurdo Dry Valleys) of Antarctica exists at temperatures significantly below the temperature optima of the primary producers. Surviving near the limit of their physiological adaptability, the organisms are under severe environmental stress, so further deterioration in the environment results in cell damage and death. The sequence of events leading to extinction is considered to be a terrestrial analog for disappearance of possible life on early Mars. Progressive stages of cell damage and death in the Ross Desert material are documented with transmission electron microscopy.

The cryptoendolithic microbial environment in the Ross Desert of Antarctica: Light in the photosynthetically active region

The vertical zonation of the Antarctic cryptoendolithic community appears to form in response to the light regime in the habitat. However, because of the structure of the habitat, the light regime is difficult to study directly. Therefore, a mathematical model of the light regime was constructed, which was used to estimate the total photon flux in different zones of the community. Maximum fluxes range from about 150 micrometers photons m-2 s-1 at the upper boundary of the community to about 0.1 micrometer photons m-2 s-1. Estimates of the annual productivity in the community indicate that the lowest zone of the community is light limited, with the maximal annual carbon uptake equivalent to less than the carbon content of one algal (Hemichloris) cell.

The cryptoendolithic microbial environment in the Ross Desert of Antarctica: Mathematical models of the thermal regime

Microbial activity in the Antarctic cryptoendolithic habitat is regulated primarily by temperature. Previous field studies have provided some information on the thermal regime in this habitat, but this type of information is limited by the remoteness of the site and the harsh climatic conditions. Therefore, a mathematical model of the endolithic thermal regime was constructed to augment the field data. This model enabled the parameters affecting the horizontal and altitudinal distribution of the community to be examined. The model predicts that colonization should be possible on surfaces with zenith angle less than 15°. At greater zenith angles, colonization should be restricted to surfaces with azimuth angles less than 135° or greater than 225°. The upper elevational limit of the community should be less than 2,500 m. The thermal regime probably does not influence the zonation of the community within a rock.

Characterization of 15 selected coccal bacteria isolated from Antarctic rock and soil samples from the McMurdo-Dry Valleys (South-Victoria Land).

Approximately 1500 cultures of microorganisms were isolated from rocks and soils of the Ross Desert (McMurdo-Dry Valleys). From these, 15 coccoid strains were chosen for more detailed investigation. They were characterized by morphological, physiological and chemotaxonomical properties. All isolates were Gram-positive, catalase-positive and nonmotile. Six strains showed red pigmentation and could be identified as members of the genera Micrococcus (M. roseus, M. agilis) or Deinococcus. In spite of their coccoid morphology, the remaining nine strains had to be associated with coryneform bacteria (Arthrobacter, Brevibacterium), because of their cell wall composition and G+C ratios. Most of the strains were psychrotrophic, but one strain was even obligately psychrophilic, with a temperature maximum below 20 degrees C. Red cocci had in vitro pH optima above 9.0 although they generally originated from acid samples. Most isolates showed a preference for sugar alcohols and organic acids, compounds which are commonly known to be released by lichens, molds and algae, the other components of the cryptoendolithic ecosystem. These properties indicate that our strains are autochthonous members of the natural Antarctic microbial population.

Biomass of the cryptoendolithic microbiota from the Antarctic desert.

Extractable lipid phosphate was used to determine the biomass of the cryptoendolithic microbiota that colonizes sandstone rocks in the Ross Desert region of Antarctica. The mean amount of lipid phosphate was 0.053 micromole/cm2 (n = 9), which equals 2.54 g of C per m2 (range, 1.92 to 3.26 g of C per m2) of biomass in the biotic zone of these rocks. The turnover of phospholipids was comparable to that of temperate sediments and soils (t1/2, 6 to 9 days) at 0 degrees C and a light intensity of 305 micromoles of photons per m2 per s, indicating that this was a good method to measure viable biomass. The biomass was 0.3 to 9.6% of the total carbon content of the biotic zone and was about 2 orders of magnitude smaller than the epilithic lichen dry weight at a location some 7 degrees north in latitude. The cryptoendolithic microbiota had a uniform density throughout the biotic zone under the rock surface. The results indicate that the cryptoendolithic microbial biomass is small but viable in this unique, extreme ecosystem.

Carbon metabolism of the cryptoendolithic microbiota from the Antarctic desert.

The carbon metabolism of the cryptoendolithic microbiota of sandstones from the Ross Desert of Antarctica was studied in situ and in vitro. Organic and inorganic carbon compounds were metabolized by the microbiota, with bicarbonate incorporation into community lipids occurring primarily in the light. Light intensity affected the photometabolism of carbon with a photosynthesis-intensity response optimum at about 200 to 300 micromoles of photons per m2 per s. Photosynthesis was also affected by temperature, with a minimum activity at -5 degrees C, an optimum activity at 15 degrees C, and complete inhibition at 35 degrees C, indicating that the cryptoendolithic community was psychrophilic. The primary source of CO2 for photosynthesis in situ was the atmosphere. CO2 may also be photometabolized by using the carbon produced from respiration within the endolithic community. Photosynthesis occurred maximally when the microbiota was wet with liquid water and to a lesser extent in a humid atmosphere. This simple microbial community, therefore, exists under extremes of water, light, and temperature stress which affect and control its metabolism.

The cryptoendolithic microbial environment in the Ross Desert of Antarctica: satellite-transmitted continuous nanoclimate data, 1984 to 1986.

A satellite mediated station for monitoring nanoclimate (climate in the millimeter range) data, suitable for use in polar regions is described. The station, located in the Ross desert of Antarctica, has been in operation for more than 3 years, measuring rock temperatures, air temperature, light, snow, wind, and moisture. The data indicate that biological activity in the cryptoendolithic microbial ecosystem is limited to the period from mid November to mid February. The total number of hours of biological activity, based on assumptions of the minimum light, temperature and moisture requirements of the community, is less than 1000 h/year. The time above 0 degrees C, representing more nearly optimal conditions, is between 50 and 550 h/year, depending on the orientation of the surface.