Fungal Root Colonization Research Articles

Synergy of biochar and biofertilizers to improve bell pepper fruit biochemical quality with increased soil carbon, Azospirillum population and mycorrhization

Sustainable crop production depends more on maintaining good soil health. Biochar significantly improves the soil's physical, chemical, biological and nutritional properties while aiding in carbon sequestration. Biofertilizers, which promote nutrient cycling, heavy metal chelation and the production of plant growth substances are crucial to sustainable agriculture. While the individual benefits of biochar and biofertilizers are well-documented, their combined effect in vegetable farming is less studied. The synergistic application of biochar and biofertilizers can improve soil health and nutrient dynamics, enhancing crops' biochemical properties. In a pot culture experiment, California Wonder bell peppers were treated with biochar and biofertilizers, including Azospirillum, Vesicular Arbuscular Mycorrhiza (VAM), and Serendipita indica. These were applied directly to the soil during transplanting. Results showed that plants treated with biochar + Azospirillum had higher flavonoid, total soluble protein and ascorbic acid content. Biochar + VAM treatment resulted in higher polyphenol content, total dry matter and root volume. S. indica reduced the vegetative period and induced earlier flowering. Biochar also increased soil organic carbon (2.89 %), improved the rhizosphere Azospirillum population and enhanced fungal endophytes' root colonization. Combining biochar and biofertilizer improves bell pepper plant performance, enhances biochemical parameters and improves soil health.

TML1 AND TML2 SYNERGISTICALLY REGULATE NODULATION AND AFFECT ARBUSCULAR MYCORRHIZA IN MEDICAGO TRUNCATULA.

Two symbiotic processes, nodulation and arbuscular mycorrhiza, are primarily controlled by the plant's need for nitrogen (N) and phosphorus (P), respectively. Autoregulation of Nodulation (AON) and Autoregulation of Mycorrhization (AOM) both negatively regulate their respective processes and share multiple components - plants that make too many nodules usually have higher AM fungal root colonization. The protein TML (TOO MUCH LOVE) was shown to function in roots to maintain susceptibly to rhizobial infection under low N conditions and control nodule number through AON in Lotus japonicus . M. truncatula has two sequence homologs: Mt TML1 and Mt TML2. We report the generation of stable single and double mutants harboring multiple allelic variations in MtTML1 and MtTML2 using CRISPR-Cas9 targeted mutagenesis and screening of a transposon mutagenesis library. Plants containing single mutations in Mt TML1 or Mt TML2 produced 2-3 times the nodules of wild-type plants whereas plants containing mutations in both genes displayed a synergistic effect, forming 20x more nodules compared to wild type plants. Examination of expression and heterozygote effects suggest genetic compensation may play a role in the observed synergy. Plants with mutations in both TMLs only showed mild increases in AM fungal root colonization at later timepoints in our experiments, suggesting these genes may also play a minor role in AM symbiosis regulation. The mutants created will be useful tools to dissect the mechanism of synergistic action of Mt TML1 and Mt TML2 in M. truncatula symbiosis with beneficial microbes.

Evaluation of the Colonization of Plants from Five Quercus Taxa Native to Greece by Tuber aestivum (Ascomycota, Pezizales).

Fungi of the genus Tuber are famous for their hypogeous ascomata (truffles), many of which possess noteworthy organoleptic properties. T. aestivum shows a wide geographic distribution, has many plant symbionts and is well adapted to various climatic conditions. In this study, five Quercus taxa native to Greece (i.e., Q. coccifera, Q. ilex, Q. ithaburensis subsp. macrolepis, Q. pubescens and Q. trojana subsp. trojana) were inoculated with spore suspensions obtained from a single ascoma of T. aestivum. The fungal colonization of oak roots was evaluated at three, seven and 12 months after inoculation; the respective colonization rates for each time period were as follows: low to medium (17-41%) for Q. pubescens, Q. ithaburensis subsp. macrolepis and Q. trojana subsp. trojana, medium to relatively high (58-80%) for Q. ithaburensis subsp. macrolepis, Q. ilex, Q. pubescens and Q. trojana subsp. trojana, and medium to high (45-87%) for all oak species examined. Positive correlations were assessed between the number of colonized root tips and the total root tips number, but no significant differences were detected between the inoculated plants and the respective control as regards plant growth. The ectomycorrhizae formed by T. aestivum with Q. ithaburensis subsp. macrolepis and Q. trojana subsp. trojana are described for the first time. The outcome of the study evidences the feasibility of generating the seedlings of various indigenous oak species (covering a large range of diverse habitats) successfully inoculated with autochthonous truffles to be readily used for cultivation purposes.

Wheat varieties show consistent differences in root colonization by mycorrhiza across a European pedoclimatic gradient

AbstractArbuscular mycorrhizal (AM) fungi form mutualistic relationships with the majority of land plants and are an important part of the soil microbial community in natural and agricultural ecosystems. These fungi promote water and nutrient acquisition by their host plant and regulate the allocation of photosynthetic carbon to soil. Both crop variety and environment affect naturally occurring mycorrhizal abundance in roots, but the relative importance of those factors for mycorrhization is largely unknown. In a field study covering a large pedoclimatic gradient across four European sites, we (i) compared the abundance of AM fungi in the roots of 10 modern winter wheat (Triticum aestivum L.) varieties, (ii) evaluated the relative importance of variety and site for the variability in root colonization by AM fungi and (iii) tested the relationship between mycorrhizal abundance and grain yield. Root colonization by arbuscules and hyphae ranged from 10% to 59% and 20% to 91%, respectively, across all samples and varied by 8% and 18%, respectively, among varieties when averaged across sites. Variance decomposition analysis revealed a 10 times higher importance of site than variety for AM fungal root colonization. Specifically, we found the highest mycorrhizal abundance on the site with the most arid conditions and the lowest on the sites with low soil pH and high nutrient availability. Despite the low variability in mycorrhizal abundance among varieties, there were significant differences in both arbuscular and hyphal root colonization. However, this did not translate into an increase in yield as no significant relationships between mycorrhizal abundance at flowering and grain yield were detected. The consistent differences between wheat varieties in root colonization by AM fungi across European field sites underline that genetic drivers of mycorrhization are to some extent independent of the site. This highlights the relevance of breeding practices to shape a wheat variety's capacity for mycorrhizal symbiosis across a range of environmental conditions.

Two novel Archaeorhizomyces species isolated from ericoid mycorrhizal roots and their association with ericaceous plants in vitro

Archaeorhizomyces is a diverse and ubiquitous genus of the subphylum Taphrinomycotina, which contains soil-inhabiting/root-associated fungi. Although ecological importance and root-associating lifestyles of Archaeorhizomyces can be postulated, morphological aspects of fungal body and root colonization are largely unknown due to the scarcity of cultures. We obtained three unidentified Archaeorhizomyces isolates from ericoid mycorrhizal (ErM) roots of Rhododendron scabrum and Rhododendron × obtusum collected in Japan. To advance our understanding of lifestyle of the genus, we investigated their general morphology, phylogeny, and in vitro root-colonizing ability in ericoid mycorrhizal hosts, Vaccinium virgatum and Rhododendron kaempferi. Some morphological characteristics, such as slow glowing white-to-creamy-colored colonies and formation of yeast-like or chlamydospore-like cells, were shared between our strains and two described species, Archaeorhizomycesfinlayi and Archaeorhizomyces borealis, but they were phylogenetically distant. Our strains were clearly distinguished as two undescribed species based on morphology and phylogenetic relationship. As seen in typical ErM fungi, both species frequently formed hyphal coils within vital rhizodermal cells of ErM plants in vitro. The morphology of hyphal coils was also different between species. Consequently, two novel species, Archaeorhizomyces notokirishimae sp. nov. and Archaeorhizomyces ryukyuensis sp. nov., were described.

Prairie restoration promotes the abundance and diversity of mutualistic arbuscular mycorrhizal fungi.

Predicting how biological communities assemble in restored ecosystems can assist in conservation efforts, but most research has focused on plants, with relatively little attention paid to soil microbial organisms that plants interact with. Arbuscular mycorrhizal (AM) fungi are an ecologically significant functional group of soil microbes that form mutualistic symbioses with plants and could therefore respond positively to plant community restoration. To evaluate the effects of plant community restoration on AM fungi, we compared AM fungal abundance, species richness, and community composition of five annually cultivated, conventionally managed agricultural fields with paired adjacent retired agricultural fields that had undergone prairie restoration 5-9 years prior to sampling. We hypothesized that restoration stimulates AM fungal abundance and species richness, particularly for disturbance-sensitive taxa, and that gains of new taxa would not displace AM fungal species present prior to restoration due to legacy effects. AM fungal abundance was quantified by measuring soil spore density and root colonization. AM fungal species richness and community composition were determined in soils and plant roots using DNA high-throughput sequencing. Soil spore density was 2.3 times higher in restored prairies compared to agricultural fields, but AM fungal root colonization did not differ between land use types. AM fungal species richness was 2.7 and 1.4 times higher in restored prairies versus agricultural fields for soil and roots, respectively. The abundance of Glomeraceae, a disturbance-tolerant family, decreased by 25% from agricultural to restored prairie soils but did not differ in plant roots. The abundance of Claroideoglomeraceae and Diversisporaceae, both disturbance-sensitive families, was 4.6 and 3.2 times higher in restored prairie versus agricultural soils, respectively. Species turnover was higher than expected relative to a null model, indicating that AM fungal species were gained by replacement. Our findings demonstrate that restoration can promote a relatively rapid increase in the abundance and diversity of soil microbial communities that had been degraded by decades of intensive land use, and community compositional change can be predicted by the disturbance tolerance of soil microbial taxonomic and functional groups.

Improved Waterlogging Tolerance in Roots of Cucumber Plants after Inoculation with Arbuscular Mycorrhizal Fungi

Mycorrhizal symbiosis enhances host plant resistance to various unfavorable environmental stresses, but whether and how it also enhances waterlogging tolerance in cucumber plants is not known. The objective of this study was to analyze the effect of Paraglomus occultum inoculation on biomass production, osmolyte levels, and the expression of 12 heat shock protein 70 (Hsp70) genes and 14 plasma membrane intrinsic protein (PIP) genes in the roots of cucumber plants under a short-term waterlogging stress (WS) (5 days) condition. Although the short-term WS treatment significantly inhibited the arbuscular mycorrhizal fungal colonization of roots, the inoculation with arbuscular mycorrhizal fungi (AMFs) significantly increased leaf, stem, and root biomass under WS. AMF inoculation also significantly increased root glucose, sucrose, betaine, and proline contents, along with decreased fructose levels, compared with the uninoculated control. More CsHsp70 and CsPIP genes were up-regulated in AMF-inoculated plants than in AMF-uninoculated plants in response to WS. AMF inoculation showed no significant effect on the expression of any of the examined CsHsp70 genes under no-waterlogging stress, but it did raise the expression of 11 of 12 CsHsp70 genes under WS. AMF colonization also down-regulated or had no effect on CsPIP expression under no-waterlogging stress, whereas it up-regulated the expression of 12 of the 14 CsPIP genes under WS. It is concluded that AMF inoculation enhances waterlogging tolerance in cucumber plants by increasing osmolyte levels and stress-responsive gene (CsPIP and CsHsp70) expression.

Arbuscular mycorrhiza and rhizosphere soil enzymatic activities as modulated by grazing intensity and plant species identity in a semi-arid grassland

Understanding the symbiosis of arbuscular mycorrhizal fungi (AMF) with plants in relation to soil nutrients and enzyme activities under different grazing intensities can be an important guide for the management and protection of semi-arid grasslands. The aim of the present study was to evaluate how the interaction of grazing intensity and plants shapes the composition of AMF communities and enzyme activities in a semi-arid grassland ecosystem in Iran. Sampling focused three dominant plant species (i.e., Salsola laricina, Artemisia siberia, and Stipa hohenackeriana) at sites with different grazing intensities. Soil chemical properties, enzyme activities, root colonization by AMF and AMF communities in the roots were evaluated. Potassium and nitrogen, as well as alkaline phosphatase and urease enzymatic activities were significantly increased at the heavily grazed site, whereas root colonization by AMF was reduced by the high grazing intensity. In addition, AM fungal root colonization is dependent on the host plant species and easier to measure as a sensitive indicator of sustainable grazing. Neither plant species nor grazing intensity affected AM fungal diversity in roots, which could be due to the overall low phylogenetic diversity of AMF in the grassland and the lack of significant differences in soil humidity, pH and organic carbon between the sites. However, plant species and soil properties were the two factors explaining variation in AMF community composition, while grazing had no significant effect. Therefore, AMF communities in root of the semi-arid grassland plants responded largely to plant type rather than to grazing intensity.

Tripartite interactions among free‐living, N‐fixing bacteria, arbuscular mycorrhizal fungi, and plants: Mutualistic benefits and community response to co‐inoculation

AbstractInteractions between arbuscular mycorrhizal (AM) fungi and free‐living nitrogen fixers (FLNF) occur in the rhizosphere where they can enhance plant nutrient acquisition, impact plant growth, and affect soil processes. Tripartite mutualism commonly occurs between nodule‐forming plants, symbiotic diazotrophs, and AM fungi, and can occur between non‐nodulating plants, FLNF, and AM fungi. However, information on the extent of, and controls on, tripartite mutualism in non‐nodulating plant systems is limited to a small number of crop plants and culturable microbial inoculum, mostly in greenhouse growing conditions. We conducted a systematic literature review to synthesize the current understanding of the responses of plants, AM fungi, and FLNF to co‐inoculation, as well as the conditions affecting tripartite mutualism and the magnitude and range of benefits conferred. Our review shows that plants generally benefit from co‐inoculation with AM fungi and FLNF taxa, but benefits are highly variable and context dependent, ranging from 94% reduction in plant shoot biomass to 255% increase in total plant biomass. Additionally, the presence of AM fungi can increase abundance of FLNF and the presence of FLNF can increase AM fungal root colonization, but these responses also vary widely. Major factors influencing variation in response to co‐inoculation by all organisms include plant phenology/age, soil type and nutrient availability, and partner pairing. There is potential for leveraging these tripartite mutualisms to improve plant productivity and soil microbial function, but successful application is more likely with a thorough understanding of the environmental and mechanistic controls on these relationships and testing of field‐scale implementation.

Assessment of root colonization, identification, and phosphate solubilization activity of root endophytic fungi obtained from hybrid tomato Lycopersicon esculentum Mill. var. TNAU CO3

Assessment of root colonization, identification, and phosphate solubilization activity of root endophytic fungi obtained from hybrid tomato Lycopersicon esculentum Mill. var. TNAU CO3

Reviewing impacts of biotic and abiotic stresses on the regulation of phosphate homeostasis in plants.

Adapting to varying phosphate levels in the environment is vital for plant growth. The PHR1phosphate starvation response transcription factor family, along with SPX inhibitors, plays a pivotal role in plant phosphate responses. However, this regulatory hub intricately links with diverse biotic and abiotic signaling pathways, as outlined in this review. Understanding these intricate networks is crucial, not only on a fundamental level but also for practical applications, such as enhancing sustainable agriculture and optimizing fertilizer efficiency. This comprehensive review explores the multifaceted connections between phosphate homeostasis and environmental stressors, including various biotic factors, such as symbiotic mycorrhizal associations and beneficial root-colonizing fungi. The complex coordination between phosphate starvation responses and the immune system are explored, and the relationship between phosphate and nitrate regulation in agriculture are discussed. Overall, this review highlights the complex interactions governing phosphate homeostasis in plants, emphasizing its importance for sustainable agriculture and nutrient management to contribute to environmental conservation.

Effects of root-colonizing fungi on pioneer Pinus thunbergii seedlings in primary successional volcanic mudflow on Kuchinoerabu Island, Japan.

Root-colonizing fungi, such as mycorrhizal fungi and dark septate endophyte fungi, are often found on pioneer plant species during early primary succession. However, little is known about which fungal species are responsible for the establishment of pioneer plants when these symbionts colonize simultaneously. We investigated the root-colonizing fungal communities of Pinus thunbergii that established prior to lichens, bryophytes, and short-lived herbaceous plants in a primary successional volcanic mudflow site on Kuchinoerabu Island, Japan. We collected a total of 54 current-year and 1- to 2-year-old seedlings. The colonization of root fungi was evaluated by direct observation of key structures (e.g., mantle, arbuscule, microsclerotia, and hyphae) and molecular analysis. Of the 34 current-year seedlings collected, only 12 individuals were colonized by ectomycorrhizal (ECM) fungi. By contrast, all 1- to 2-year-old seedlings were colonized by ECM fungi. Seedlings colonized by pine-specific ECM fungi, specifically Rhizopogon roseolus and Suillus granulatus, showed higher nitrogen and phosphorus contents in their needles compared to non-ECM seedlings. Arbuscular mycorrhizal fungi and dark septate endophyte fungi were found in only two and three individuals, respectively. The high density of mycophagous deer on Kuchinoerabu-jima may contribute to the favored dispersal of ECM fungi over other root-colonizing fungi. In conclusion, the seedling establishment of P. thunbergii at the volcanic mudflow may be largely supported by ECM fungi, with negligible effects of arbuscular mycorrhizal fungi and dark septate endophytes.

Morpho-Physiological Responses of Malabayabas (Tristaniopsis decorticata (Merr.) Peter G. Wilson & J.T. Waterh.) Seedlings Inoculated with Arbuscular Mycorrhizal Fungi

Malabayabas (Tristaniopsis decorticata (Merr.) Peter G. Wilson & J.T. Waterh.) of the Myrtaceae family is a vulnerable endemic tree species in the Philippines. Poor development and low regeneration rates of seedlings in their natural habitats have led to a considerable population decline of the species. This study aimed to determine the morphological and physiological growth responses of T. decorticata seedlings in different soil media inoculated with arbuscular mycorrhizal fungi applied once at a rate of 5 g per seedling for the entire duration of the experiment. Morphological parameters were collected using conventional methods, while physiological parameters were measured using LI-6400 XT Portable Photosynthesis System. Results of the study revealed that the morphological growth of seedlings was generally better in Bantay soil regardless of treatments than in Lipa soil. Interestingly, the net photosynthesis, transpiration rate, and water-use efficiency were generally higher in Lipa unsterilized soil inoculated with arbuscular mycorrhizal fungi. However, this study can not yet confirm the percentage of Arbuscular Mycorrhizal Fungi (AMF) root colonization. Thus, further research must be conducted to determine the AMF root colonization and identify potential indigenous mycorrhizal fungi in both soil media. Keywords: arbuscular mycorrhizal fungi, endemic, net photosynthesis, transpiration rate, Tristanipsis decorticata

Isolation and characterization of a newly discovered plant growth-promoting endophytic fungal strain from the genus Talaromyces

In the Kandi zone of Punjab, India, root and rhizospheric soil samples were collected from the local vegetation near the Shivalik mountain foothills. Fifteen fungal colonies exhibiting distinct cultural morphology on Potato Dextrose Agar (PDA) plates were selected for plant–microbe interaction studies. Among these, the isolate HNB9 was identified as a nonpathogenic root colonizer. Morphological and molecular analyses confirmed HNB9 as Talaromyces albobiverticillius, characterized by the secretion of a red pigment as a secondary metabolite. Plants colonized with T. albobiverticillius HNB9 exhibited enhanced growth, manifesting in increased shoot and root length compared to untreated controls. This study unveiled the first evidence that a species from the Talaromyces genus, specifically T. albobiverticillius, possesses dual capabilities of root colonization and plant growth promotion. Moreover, HNB9 demonstrated the production of plant growth-regulating compounds like Indole Acetic Acid (IAA) and proficient solubilization of crucial nutrients (Phosphorous, Zinc, and Silica) through plate culture methods. This finding represents a significant contribution to the understanding of root-colonizing fungi with plant growth-promoting attributes, challenging the existing knowledge gap within the Talaromyces genus.

Divergent colonization traits, convergent benefits: different species of arbuscular mycorrhizal fungi alleviate Meloidogyne incognita damage in tomato

Arbuscular mycorrhizal fungi (AMF) can increase plant tolerance and/or resistance to pests such as the root-knot nematode Meloidogyne incognita. However, the ameliorative effects may depend on AMF species. The aim of this work was therefore to evaluate whether four AMF species differentially affect plant performance in response to M. incognita infection. Tomato plants grown in greenhouse conditions were inoculated with four different AMF isolates (Claroideoglomus claroideum, Funneliformis mosseae, Gigaspora margarita, and Rhizophagus intraradices) and infected with 100 second stage juveniles of M. incognita at two different times: simultaneously or 2 weeks after the inoculation with AMF. After 60 days, the number of galls, egg masses, and reproduction factor of the nematodes were assessed along with plant biomass, phosphorus (P), and nitrogen concentrations in roots and shoots and root colonization by AMF. Only the simultaneous nematode inoculation without AMF caused a large reduction in plant shoot biomass, while all AMF species were able to ameliorate this effect and improve plant P uptake. The AMF isolates responded differently to the interaction with nematodes, either increasing the frequency of vesicles (C. claroideum) or reducing the number of arbuscules (F. mosseae and Gi. margarita). AMF inoculation did not decrease galls; however, it reduced the number of egg masses per gall in nematode simultaneous inoculation, except for C. claroideum. This work shows the importance of biotic stress alleviation associated with an improvement in P uptake and mediated by four different AMF species, irrespective of their fungal root colonization levels and specific interactions with the parasite.

Populus MYC2 orchestrates root transcriptional reprogramming of defence pathway to impair Laccaria bicolor ectomycorrhizal development.

The jasmonic acid (JA) signalling pathway plays an important role in the establishment of the ectomycorrhizal symbiosis. The Laccaria bicolor effector MiSSP7 stabilizes JA corepressor JAZ6, thereby inhibiting the activity of Populus MYC2 transcription factors. Although the role of MYC2 in orchestrating plant defences against pathogens is well established, its exact contribution to ECM symbiosis remains unclear. This information is crucial for understanding the balance between plant immunity and symbiotic relationships. Transgenic poplars overexpressing or silencing for the two paralogues of MYC2 transcription factor (MYC2s) were produced, and their ability to establish ectomycorrhiza was assessed. Transcriptomics and DNA affinity purification sequencing were performed. MYC2s overexpression led to a decrease in fungal colonization, whereas its silencing increased it. The enrichment of terpene synthase genes in the MYC2-regulated gene set suggests a complex interplay between the host monoterpenes and fungal growth. Severalroot monoterpenes have been identified as inhibitors of fungal growth and ECM symbiosis. Our results highlight the significance of poplar MYC2s and terpenes in mutualistic symbiosis by controlling root fungal colonization. We identified poplar genes which direct or indirect control by MYC2 is required for ECM establishment. These findings deepen our understanding of the molecular mechanisms underlying ECM symbiosis.

Effect of Cinnamon Leaf Compost on Selected Soil Properties in Cinnamon (Cinnamomum zeylanicum Blume) Growing Soils

Integrated nutrient-management programs incorporating organic and inorganic fertilizers have been suggested to increase crop yields and reduce adverse environmental impacts in intensive agriculture. This study was conducted to investigate the effect of long-term cinnamon leaf compost (CLC) application on some selected physical, biological and chemical soil properties and the horizontal and vertical distribution of some selected soil properties in cinnamon-growing soils. The study was conducted in the National Cinnamon Research and Training Center, Palolpitiya, from January to April 2022. The experimental design was Randomized Complete Block Design (RCBD) with six treatments (T1-Control, T2-Current recommendation (CR), T3-3/4 CR with 5 t/ha/yr CLC, T4-1/2 CR with 10 t/ha/yr CLC, T5-1/4 CR with 15 t/ha/yr CLC, T6-20 t/ha/yr CLC) and three replicates. Soil samples were collected considering three horizontal distances (15, 30 and 45 cm) and with three depths (10, 20 and 30 cm). Soil physical properties (aggregate stability, bulk density, soil moisture), chemical properties (soil organic carbon (SOC), pH, electrical conductivity (EC)), and biological properties (arbuscular mycorrhizal root colonization) were determined. Water stable aggregate (WSA), SOC, and soil pH were significantly affected by the treatments, and all the variables except EC were significantly affected by the soil depth (p<0.05). Soil pH was the only variable that was significantly affected by the horizontal distance (p<0.05). Only SOC and pH have shown a significant interaction effect among treatments and depth. The application of CLC (20 t/ha/yr) significantly increases the WSA and SOC. Arbuscular mycorrhizal fungi root colonization was increased with the incorporation of CLC. Continuous application of inorganic fertilizers (T2) caused soil compaction and acidification. WSA, soil pH, and SOC were significantly improved within the 0-10 cm soil depth. The best performances of WSA, pH, and EC were shown in 30-45 cm and SOC in 15–30 cm horizontal distance from the plant base and 0-10 cm soil depth with the application of 1/2 CR and 10 t/ha/yr CLC comparison to other fertilizer combinations. 
 Keywords: Aggregates, Mycorrhizae, pH, Soil organic carbon

Comparing dry farming of tomatoes across varieties and soil management history

Farmers faced with increasingly limited access to freshwater for irrigation are utilizing dry farming techniques to produce fruit, vegetable, and grain crops. Defined as crop production during a dry season using little or no irrigation, dry farming relies on water stored in the soil and requires specialized soil management, healthy soil biology, and careful selection of crop varieties. We investigated these three factors in a dry-farmed tomato (Solanum lycopersicum) field trial with three indeterminate varieties (Early Girl, Momotaro, and Zapotec) and two determinate genotypes (76R and rmc), the latter serving as a model system for studying the role of arbuscular mycorrhizal (AM) fungi. While five prior years of contrasting surface tillage practices changed soil properties, they did not affect marketable tomato yields or quality, nor affect plant physiology, including plant water use efficiency [intrinsic (WUEi) and long-term (δ13C)], gas exchange, stem water potential (Ψstem), and leaf relative water content (RWC). Early Girl produced a greater number of fruits and fewer non-marketable fruits than Momotaro and Zapotec. Although AM fungi root colonization was very low for both wildtype mycorrhizal genotype 76R and its reduced mycorrhizal mutant rmc, it differed significantly depending on genotype and tillage treatment. 76R produced slightly greater marketable fruit, but physiological responses did not differ significantly between genotypes. This study does not provide field-based evidence that soil chemical and biological changes resulting from no-till influence dry-farmed tomato productivity, while genotype had a clear impact on tomato yield and quality. Field-scale tillage experiments may better capture soil physical changes that affect water availability, especially at depth, and should be examined.

Comparative Response of Arbuscular Mycorrhizal Fungi versus Endophytic Fungi in Tangor Citrus: Photosynthetic Efficiency and P-Acquisition Traits

Citrus plants are prone to phosphorus (P) deficiency, especially in acidic soil, making them more dependent on root-associated endophytic fungi for growth and development. Beni-Madonna, a hybrid of Citrus nanko × C. amakusa, is a citrus known as “tangor” that is highly popular in China and other parts of the world due to its deep red color and jelly-like flesh. In this study, the inoculation response to two arbuscular mycorrhizal fungi (Diversispora versiformis, Dv; Funneliformis mosseae, Fm) and an endophytic fungus (Serendipita indica, Si) with regard to the growth, leaf gas exchange, light energy efficiency, P levels, acid phosphatase activity, and expression of the purple acid phosphatase (PAP) and phosphate transporter (PT) genes through a potted experiment using Beni-Madonna (tangor) citrus plants grafted on trifoliate orange (Poncirus trifoliata) was studied. Two years following inoculation, the root fungal colonization rates of inoculated plants were significantly increased, accompanied by an increase in plant height and stem diameter, with Si presenting the best effect. Fungal inoculations also significantly increased the leaf chlorophyll index, nitrogen-balance index, photosynthesis rate, stomatal conductance, transpiration rate, photosynthetic efficiency, and quantum yield of PSII, while it reduced photoinhibition and heat dissipation, with Si having the best effect on light energy efficiency. Si significantly increased leaf and root P levels, as well as root CsPAP1‒3, CsPT2, CsPT3, and CsPT7 expression and soil acid phosphatase activity; Fm in mycorrhizal fungi significantly increased leaf and root P levels, as well as root CsPT1 and CsPT7 expression and root/soil acid phosphatase activity. These observations suggested an advantage of Si over the other two AMF in terms of improved plant growth and P acquisition, while Fm displayed prominent effects on increased photosynthetic efficiency.

Serendipita indica: A Biostimulant Enhancing Low-Temperature Tolerance and Active Constituent Levels in Polygonum cuspidatum

Polygonum cuspidatum is a traditional medicinal plant enriched with resveratrol and polydatin. However, low temperatures reduce the medicinal component contents of P. cuspidatum, and prolonged low temperatures also affect the growth and survival of P. cuspidatum at the seedling stage. It is unclear whether a culturable endophytic fungus Serendipita indica is able to enhance P. cuspidatum’s low-temperature tolerance and medicinal components. The objective of this study was to examine the biomass, leaf gas exchange, antioxidant enzyme activity, proline levels, medicinal constituent levels, and the expression of the resveratrol synthase (PcRS) and resveratrol-forming stilbene synthase 11 (PcRS11) genes of potted P. cuspidatum plants inoculated with S. indica at low temperatures (10 °C/6 °C, 12 h/12 h, day/night temperature). The six-week low-temperature treatment significantly reduced the root fungal colonization, biomass production, and leaf gas exchange variables, whereas S. indica inoculation significantly increased shoot and root biomass, photosynthetic rate, stomatal conductance, and transpiration rate at low temperatures. S. indica inoculation significantly increased superoxide dismutase and catalase activity as well as proline levels in leaves at low temperatures. The magnitude of root chrysophanol, emodin, polydatin, and resveratrol levels decreased by low temperatures was greater in uninoculated plants than in inoculated plants. Inoculation of S. indica, on the other hand, significantly increased the four medicinal component levels in roots at low temperatures, with a greater magnitude rise in chrysophanol, polydatin, and resveratrol at low temperatures than at suitable temperatures. The low-temperature treatment down-regulated the expression of PcRS and PcRS11 genes in roots, while S. indica up-regulated the expression of PcRS and PcRS11 genes at low temperatures. This implies that S. indica acts as a powerful microbial stimulant on P. cuspidatum to promote low-temperature resistance and medicinal component levels.