Riverine Populations Research Articles

Snakebites as cause of deaths in the Western Brazilian Amazon: Why and who dies? Deaths from snakebites in the Amazon

Snake envenoming represents a major burden for public health worldwide. In the Amazon, the official number of cases and deaths detected is probably underestimated because of the difficulty riverine and indigenous populations have reaching health centers in order to receive medical assistance. Thus, integrated analysis of health information systems must be used in order to improve adequate health policies. The aim of this work is to describe a series of deaths and identify risk factors for lethality from snakebites in the state of Amazonas, Brazil. All deaths from snakebites reported to the Brazilian Notifiable Diseases Surveillance System (SINAN) and to the Mortality Information System (SIM; ICD10-10th revision, X.29), from 2007 to 2015, were included. Variables were assessed by blocks with distal (ecological variables), intermediate (demographics) and proximal (clinical variables) components to identify predictors of case fatality. A total of 127 deaths from snakebites were recorded, with 58 pairs found through linkage of the SINAN and SIM databases (45.7%), 37 (29.1%) deaths found only in SINAN and 32 (25.2%) found only in the SIM. Deaths occurred mostly in males (95 cases; 74.8%) living in rural areas (78.6%). The most affected age group was the ≥61 years old (36 cases; 28.4%). Snakebites were presumably due to Bothrops snakes in 68.5% of the cases and Lachesis in 29.5% based on clinico-epidemiological diagnosis. A proportion of 26.2% of the cases received treatment over 24 h after the bite ocurred. On admission, cases were mostly classified as severe (65.6%). Overall, 28 patients (22.0%). Deceased without any medical assistance Antivenom was given to 53.5%. In the multivariate analysis, a distance from Manaus >300 km [OR = 3.40 (95%CI = 1.99–5.79); (p < 0.001)]; age ≥61 years [OR = 4.31 (95%CI = 1.22–15.21); (p = 0.023)] and Indigenous status [OR = 5.47 (95%CI = 2.37–12.66); (p < 0.001)] were independently associated with case fatality from snakebites. Severe snakebites [OR = 16.24 (95%CI = 4.37–60.39); (p < 0.001)] and a lack of antivenom administration [OR = 4.21 (95%CI = 1.30–13.19); (p = 0.014)] were also independently associated with case fatality. Respiratory failure/dyspnea, systemic bleeding, sepsis and shock were recorded only among fatal cases. In conclusion, i) death from snakebites was underreported in the mortality surveillance system; ii) older age groups living in remote municipalities and indigenous peoples were the population groups most prone to death; iii) lack or underdosage of antivenom resulted in higher case fatality and iv) systemic bleeding, circulatory shock, sepsis and acute respiratory failure were strongly associated to fatal outcome.

&lt;b&gt;Prevalence of major cardiometabolic diseases in the riverine populations from the interior of the State of Amazonas, Brazil

This study aimed to estimate the prevalence of major cardiometabolic diseases according to the sociodemographic characteristics and lifestyle in the riverine communities of the municipalities of Tefé and Santa Isabel do Rio Negro, State of Amazonas, Brazil. Descriptive tests and logistic regression models were used to estimate the effect of age, gender, marital status, education, smoking, alcohol consumption and sedentary lifestyle on the prevalence of cardiometabolic diseases in 552 adults aged from 18 to 78 years. The prevalence of hypertension, diabetes and obesity in Tefé and Santa Isabel do Rio Negro were respectively 28 / 30.7%; 28.2/ 8.9%; and 22.3 / 42%. In Tefé, married men, aged over 35 years, were more susceptible to the cardiometabolic diseases. In Santa Isabel do Rio Negro, smoking men aged over 35 with low education level were more prone to diabetes and hypertension. Such data reinforce the need to monitor the risk indicators as a preventive measure and early detection of some cardiometabolic diseases.

Inquérito de saúde em comunidades ribeirinhas do Amazonas, Brasil

Population-based health surveys are important tools for identifying disease determinants, especially in regions with widely dispersed populations and low health system coverage. The aim of this study was to describe the principal methodological aspects and to describe the socioeconomic, demographic, and health characteristics of the riverine populations of Coari, Amazonas State, Brazil. This was a population-based cross-sectional study in river-dwelling communities in the rural area of Coari, from April to July 2015. The probabilistic cluster sample consisted of 492 individuals. The results showed that the majority of the river-dwellers were females (53%), had up to 9 years of schooling (68.5%), and earned a monthly family income equivalent to one-third the minimum wage. The health problems reported in the previous 30 days featured conditions involving pain (45.2%). The main healthcare resources were allopathic medicines (70.3%), exceeding herbal remedies (44.3%). The river-dwellers travel an average of 60.4km and take some 4.2 hours to reach the urban area of Coari. The riverine population generally presents low economic status and limited access to the urban area. Health problems are mostly solved with allopathic medicines. Geographic characteristics, as barriers to access to health services and to improvements in living conditions for the riverine population, can limit the collection of epidemiological data on these populations.

Glucosylsphingosine concentration in the blood of Gaucher patients reflects the severity of GBA mutations - data from a large global cohort

The Oryzias woworae species group, composed of O. asinua, O. wolasi, and O. woworae, is widely distributed in southeastern Sulawesi, an island in the Indo-Australian Archipelago. Deep-elongated body shape divergence is evident among these three species to the extent that it is used as a species-diagnostic character. These fishes inhabit a variety of habitats, ranging from upper streams to ponds, suggesting that the body shape divergence among the three species may reflect adaptation to local environments. First, our geometric morphometrics among eight local populations of this species group revealed that the three species cannot be separated by body shape and that riverine populations had more elongated bodies and longer caudal parts than lacustrine populations. Second, their phylogenetic relationships did not support the presence of three species; phylogenies using mitochondrial DNA and genomic data obtained from RNA-Seq revealed that the eight populations could not be sorted into three different clades representing three described species. Third, phylogenetic corrections of body shape variations and ancestral state reconstruction of body shapes demonstrated that body shape divergence between riverine and lacustrine populations persisted even if the phylogenies were considered and that body shape evolved rapidly irrespective of phylogeny. Sexual dimorphism in body shape was also evident, but the degree of dimorphism did not significantly differ between riverine and lacustrine populations after phylogenetic corrections, suggesting that sexual selection may not substantially contribute to geographical variations in body shape. Overall, these results indicate that the deep-elongated body shape divergence of the O. woworae species group evolved locally in response to habitat environments, such as water currents, and that a thorough taxonomic reexamination of the O. woworae species group may be necessary.

Population Studies on the Puntius Conchonius (Hamilton) from Cauvery and Malampuzha Dam, South India

Puntius conchonius was collected from Cauvery (Belagola) River, Karnataka and Malampuzha Dam of Kerala, South India. There are two major fishing points that were remarkable in the river systems which are selected for the present work. There are two types of rivers in which inhabit natural, ornamental and edible fish like P. conchonius. To examine the population structure of P. conchonius, the specimens were collected, preserved and analysed for biometric characteristics. In this context, 50 biometric characters were documented for all individuals and were compared between two riverine populations. Besides, the plan of study was mainly focusing on population diversity and biometric similarity of the P. conchonius. The findings of this study to identify among populations, more precisely as a colour can be as an enigmatic character of this species. As a result, there could be a possible link that was assessed between populations; the experimental biometric character like meristics was a similar one based on the ecological habitat and prey–predatory relationship.

Genetic Structuring in Riverine Population of Channa striata (Bloch, 1793) from India using Cytochrome Oxidase I Gene

The freshwater snakehead murrel fish, Channa striata, is a commercially important and potential candidate species for aquaculture. Sequences of 655 bp long cytochrome oxidase I fragments from 115 individuals, belonging to nine geographically isolated from riverine ecosystems of India, was used for genetic diversity studies. The result indicated 33 polymorphic sites with 31 parsimonious-info and 8 singletons, which revealed the presence of 16 haplotypes with haplotype diversity (H) range from 0.4190 to 0.7424. H2 was found as ancestral haplotype with frequency of 18 individuals. C. striata populations in river Chaliyar showed distinct mitochondrial lineage with maximum 23 points mutations between mv1 to H12 and H3 to H13. The Analysis of Molecular Variance and Fst scores represented the genetic dispersal of C. striata in Indian water. Generally, moderate to high Fst scores were observed in geographically isolated C. striata populations. The finding of analysis suggests a single panmictic population of C. striata across the nine rivers of India.

Mitogenomic analysis of the Australian lungfish (Neoceratodus forsteri) reveals structuring of indigenous riverine populations and late Pleistocene movement between drainage basins

Neoceratodus forsteri: is a freshwater species of Dipnoan currently listed as ‘vulnerable to extinction’ under Australian legislation. The species is restricted to at least two indigenous riverine populations in southeastern Queensland, and several other putatively translocated populations. Current understanding of genetic relationships among populations is based on studies of allozymes, microsatellites and mitochondrial DNA (mtDNA) fragments. A notable feature of all these datasets was low genetic variability. Here we sequence the complete mitogenome of 71 N. forsteri individuals from five populations to improve resolution of mtDNA diversity, examine relationships among populations, and evaluate recent demographic history. We recorded 137 variable positions forming 41 haplotypes in the 16,573 bp mitogenome alignment. Strong genetic structure was observed among riverine samples (global ΦST = 0.342) in a pattern consistent with translocation history. Tinana Creek was confirmed as an isolated and genetically unique subpopulation that should be recognized as a distinct management unit. Two previously unreported mtDNA clades (0.46% mean divergence) were found and suggest that genetic exchange among coastal catchments may have been facilitated by riverine connections on the exposed continental shelf during the late Pleistocene. Extended Bayesian skyline analysis showed no evidence for recent historical change in female effective population size, and codon-based selection tests found no evidence for positive selection in coding genes. Overall, our results emphasise the utility of the full mtDNA molecule for capturing population structure in taxa with low genetic diversity. In such cases, informative variation may be scattered across disparate parts of the mitogenome. Surveying relatively short fragments of mtDNA may lead to significant underestimates of population structure when applied to threatened species with low genetic diversity.

Fishes in the desert: mitochondrial variation and phylogeography of Danakilia (Actinopterygii: Cichlidae) and Aphanius (Actinopterygii: Cyprinodontidae) in the Danakil Depression of northeastern Africa

The Danakil Depression in northeastern Africa represents one of the harshest arid environments on Earth, yet two genera of fishes, Danakilia (Cichlidae) and Aphanius (Cyprinodontidae), share its sparse aquatic habitats. The evolutionary history of these fishes is investigated here in the context of genetic, geological and paleoenvironmental information. We collected samples from seven sites and assessed phylogeographic relationships using concatenated COI and cytb mtDNA genes. Danakilia morphospecies show low differentiation at mitochondrial markers, but variation is partitioned between a northern cluster containing D. dinicolai plus three undescribed riverine populations, and a southern cluster including two creek populations of D. franchettii separated by the hypersaline waters of Lake Afrera. Aphanius displayed four genetically distinct clades (A. stiassnyae in Lake Afrera; one distributed across the entire area; one in Lake Abaeded; and one in the Shukoray River), but without clear large-scale geographic structure. However, Danakil Aphanius are clearly differentiated from A. dispar sensu stricto from the Sinai Peninsula. Geological evidence suggests that after the Late Pleistocene closure of the Danakil-Red Sea connection, increased post-glacial groundwater availability caused the formation of a brackish paleo-lake flooding the entire region below the –50 m contour. Fish populations previously isolated in coastal oases during glaciation were able to mix in the paleo-lake. Subsequently, in a more arid phase starting ∼7300 BP, paleo-lake regression isolated fishes in separate drainages, triggering their still ongoing diversification.

Antioxidant response to heat stress in seagrasses. A gene expression study

Seawater warming associated to the ongoing climate change threatens functioning and survival of keystone coastal benthic species such as seagrasses. Under elevated temperatures, the production of reactive oxygen species (ROS) is increased and plants must activate their antioxidant defense mechanisms to protect themselves from oxidative damage. Here we explore from a molecular perspective the ability of Mediterranean seagrasses to activate heat stress response mechanisms, with particular focus on antioxidants. The level of expression of targeted genes was analyzed in shallow and deep plants of the species Posidonia oceanica and in shallow plants of Cymodocea nodosa along an acute heat exposure of several days and after recovery. The overall gene expression response of P. oceanica was more intense and complete than in C. nodosa and reflected a higher oxidative stress level during the experimental heat exposure. The strong activation of genes with chaperone activity (heat shock proteins and a luminal binding protein) just in P. oceanica plants, suggested the higher sensitivity of the species to increased temperatures. In spite of the interspecific differences, genes from the superoxide dismutase (SOD) family seem to play a pivotal role in the thermal stress response of Mediterranean seagrasses as previously reported for other marine plant species. Shallow and deep P. oceanica ecotypes showed a different timing of response to heat. Shallow plants early responded to heat and after a few days relaxed their response which suggests a successful early metabolic adjustment. The response of deep plants was delayed and their recovery incomplete evidencing a lower resilience to heat in respect to shallow ecotypes. Moreover, shallow ecotypes showed some degree of pre-adaptation to heat as most analyzed genes showed higher constitutive expression levels than in deep ecotypes. The recurrent exposure of shallow plants to elevated summer temperatures has likely endowed them with a higher basal level of antioxidant defense and a faster responsiveness to warming than deep plants. Our findings match with previous physiological studies and supported the idea that warming will differently impact Mediterranean seagrass meadows depending on the species as well as on the depth (i.e. thermal regimen) at which the meadow grows. The increase in the incidence of summer heat waves could therefore produce a significant change in the distribution and composition of Mediterranean seagrass meadows with considerable consequences for the functioning of the whole ecosystem and for the socio-economic services that these ecosystems offer to the riverine populations.

Phylogenomics reveals habitat-associated body shape divergence in Oryzias woworae species group (Teleostei: Adrianichthyidae)

The Oryzias woworae species group, composed of O. asinua, O. wolasi, and O. woworae, is widely distributed in southeastern Sulawesi, an island in the Indo-Australian Archipelago. Deep-elongated body shape divergence is evident among these three species to the extent that it is used as a species-diagnostic character. These fishes inhabit a variety of habitats, ranging from upper streams to ponds, suggesting that the body shape divergence among the three species may reflect adaptation to local environments. First, our geometric morphometrics among eight local populations of this species group revealed that the three species cannot be separated by body shape and that riverine populations had more elongated bodies and longer caudal parts than lacustrine populations. Second, their phylogenetic relationships did not support the presence of three species; phylogenies using mitochondrial DNA and genomic data obtained from RNA-Seq revealed that the eight populations could not be sorted into three different clades representing three described species. Third, phylogenetic corrections of body shape variations and ancestral state reconstruction of body shapes demonstrated that body shape divergence between riverine and lacustrine populations persisted even if the phylogenies were considered and that body shape evolved rapidly irrespective of phylogeny. Sexual dimorphism in body shape was also evident, but the degree of dimorphism did not significantly differ between riverine and lacustrine populations after phylogenetic corrections, suggesting that sexual selection may not substantially contribute to geographical variations in body shape. Overall, these results indicate that the deep-elongated body shape divergence of the O. woworae species group evolved locally in response to habitat environments, such as water currents, and that a thorough taxonomic reexamination of the O. woworae species group may be necessary.

Association between weather seasonality and blood parameters in riverine populations of the Brazilian Amazon

ObjectiveTo analyze the seasonality of blood parameters related to iron homeostasis, inflammation, and allergy in two riverine populations from the Brazilian Amazon. MethodsThis was a cross‐sectional study of 120 children and adolescents of school age, living in riverine communities of Porto Velho, Rondonia, Brazil, describing the hematocrit, hemoglobin, ferritin, serum iron, total white blood cell count, lymphocytes, eosinophils, C‐reactive protein, and immunoglobulin E levels in the dry and rainy seasons. The chi‐squared test and the prevalence ratio were used for the comparison of proportions and mean analysis using paired Student's t‐test. ResultsHemoglobin (13.3g/dL) and hematocrit (40.9%) showed higher average values in the dry season. Anemia prevalence was approximately 4% and 12% in the dry and rainy seasons, respectively. Serum iron was lower in the dry season, with a mean of 68.7 mcg/dL. The prevalence of iron deficiency was 25.8% in the dry season and 9.2% in the rainy season. Serum ferritin did not show abnormal values in both seasons; however, the mean values were higher in the dry season (48.5ng/mL). The parameters of eosinophils, lymphocytes, global leukocyte count, C‐reactive protein and immunoglobulin E showed no seasonal differences. C‐reactive protein and immunoglobulin E showed abnormal values in approximately 7% and 60% of the examinations, respectively. ConclusionHematological parameters of the red cell series and blood iron homeostasis had seasonal variation, which coincided with the dry season in the region, in which an increase in atmospheric pollutants derived from fires is observed.

Genomic signatures of paleodrainages in a freshwater fish along the southeastern coast of Brazil: genetic structure reflects past riverine properties.

Past shifts in connectivity in riverine environments (for example, sea-level changes) and the properties of current drainages can act as drivers of genetic structure and demographic processes in riverine population of fishes. However, it is unclear whether the same river properties that structure variation on recent timescales will also leave similar genomic signatures that reflect paleodrainage properties. By characterizing genetic structure in a freshwater fish species (Hollandichthys multifasciatus) from a system of basins along the Atlantic coast of Brazil we test for the effects of paleodrainages caused by sea-level changes during the Pleistocene. Given that the paleodrainage properties differ along the Brazilian coast, we also evaluate whether estimated genetic diversity within paleodrainages can be explained by past riverine properties (i.e., area and number of rivers in a paleodrainage). Our results demonstrate that genetic structure between populations is not just highly concordant with paleodrainages, but that differences in the genetic diversity among paleodrainages correspond to the joint effect of differences in the area encompassed by, and the number of rivers, within a paleodrainage. Our findings extend the influence of current riverine properties on genetic diversity to those associated with past paleodrainage properties. We discuss how these findings may explain the inconsistent support for paleodrainages in structuring divergence from different global regions and the importance of taking into account past conditions for understanding the high species diversity of freshwater fish that we currently observe in the world, and especially in the Neotropics.

Injuries caused by freshwater stingrays in the Tapajós River Basin: a clinical and sociodemographic study.

Freshwater stingray envenomations are an important cause of morbidity in riverine populations living in various regions of Brazil. The sequelae include temporary or permanent disability. This study aimed to identify sociodemographic, clinical, and therapeutic aspects related to stingray injuries in such populations. This cross-sectional study was conducted in the Extractive Reserve of Tapajos-Arapiuns, located in the municipalities of Santarém and Aveiro (Pará State). A convenience sample comprising 300 local adults was used to obtain data by means of a questionnaire/ interview. Overall, 19 (6.3%) participants reported having sustained a stingray injury in the 12 months prior to the study. All 19 were injured either while fishing (n=13 [68.4%]) or engaging in other riverine activities. Most injuries [n=14 (73.7%)] occurred from September through November, and most injured respondents [n=15 (78.9%)] reported seeing stingrays at beaches. Severe pain and the appearance of ulcers in the later stages of envenomation were described by 18 (94.7%) and 12 (63.2%) participants, respectively. Freshwater stingray injuries, which should be considered occupational injuries, are common in the study area, especially in places like beaches or in the lakes that form during the dry season, when stingrays are routinely observed. A significant proportion of respondents was unaware of the correct first aid measures and had insufficient resources to treat the complications of these injuries in the locality where they reside. Interactive activities involving local residents - such as lectures and the distribution of simple pamphlets providing information about stingray injuries - are needed.

Mapeamento e análise de risco de inundação da Bacia do Rio Paraíba/AL: estudo de caso

Os mapas de inundação se configuram em um instrumento importante na prevenção, controle e gestão das inundações, pois por meio deles é possível definir as áreas de risco. Dessa forma, o presente estudo teve como objetivo mapear as áreas potenciais de risco de inundação na área urbana de Quebrangulo, município localizado no estado de Alagoas. O mapeamento se deu a partir de dados de população e domicílios, obtidos no censo demográfico do IBGE de 2010, e da modelagem hidrodinâmica, realizada pelo modelo computacional bidimensional IBER, que forneceu as laminas d’água de inundação ocorridas para cada localidade. Assim, com a utilização do programa ArcMap foi possível elaborar um mapa de risco com manchas de inundação para os períodos de retorno de 5, 10, 25, 50 e 100 anos, para dois diferentes cenários. As áreas identificadas como sendo as de maiores problemas em relação às inundações são aquelas localizadas nas proximidades do rio Paraíba, onde estão inseridas as populações ribeirinhas, principalmente devido à vulnerabilidade e à ocupação desordenada.

Association between weather seasonality and blood parameters in riverine populations of the Brazilian Amazon

ObjectiveTo analyze the seasonality of blood parameters related to iron homeostasis, inflammation, and allergy in two riverine populations from the Brazilian Amazon. MethodsThis was a cross-sectional study of 120 children and adolescents of school age, living in riverine communities of Porto Velho, Rondonia, Brazil, describing the hematocrit, hemoglobin, ferritin, serum iron, total white blood cell count, lymphocytes, eosinophils, C-reactive protein, and immunoglobulin E levels in the dry and rainy seasons. The chi-squared test and the prevalence ratio were used for the comparison of proportions and mean analysis using paired Student's t-test. ResultsHemoglobin (13.3g/dL) and hematocrit (40.9%) showed higher average values in the dry season. Anemia prevalence was approximately 4% and 12% in the dry and rainy seasons, respectively. Serum iron was lower in the dry season, with a mean of 68.7 mcg/dL. The prevalence of iron deficiency was 25.8% in the dry season and 9.2% in the rainy season. Serum ferritin did not show abnormal values in both seasons; however, the mean values were higher in the dry season (48.5ng/mL). The parameters of eosinophils, lymphocytes, global leukocyte count, C-reactive protein and immunoglobulin E showed no seasonal differences. C-reactive protein and immunoglobulin E showed abnormal values in approximately 7% and 60% of the examinations, respectively. ConclusionHematological parameters of the red cell series and blood iron homeostasis had seasonal variation, which coincided with the dry season in the region, in which an increase in atmospheric pollutants derived from fires is observed.

Genetic diversity at MHC-DRB3 locus suggests distinctness of the riverine-swamp buffalo populations in North-East region of India

Northeast region of India is a transition zone for two genetically distinct types of water buffalo (Bubalus bubalis) - riverine (Bubalus bubalis bubalis, N=50) and swamp (Bubalus bubalis carabanesis, N=48), wherein, both types of buffalo populations and their hybrids (riverineswamp, N=49) coexist. In present study, we studied genetic variability of highly polymorphic major histocompatibility complex (MHC) class II- DRB3 gene in 94 riverine-swamp buffaloes of three different locations - central Assam (ASW; riverine and hybrid types), Silchar region (ASW-SL, swamp and hybrid types), Dibrugarh region (ASW-DB, swamp) of Assam through PCR-RFLP. A total of nine HaeIII restriction patterns HaeIII- A to I, were observed in overall populations, although only six patterns were present in ASW-DB buffaloes. The HaeIII-A, -C, -F and -H patterns were found to be homozygous, accounting about 48 percent of the total buffalo population. Based on DRB3-HaeIII restriction diversity, the genetic divergence was the highest (0.460) between ASW-SL and ASW-DB buffaloes whereas, the lowest (0.063) between ASW and ASW-DB buffaloes among three populations. In Principle Coordinate Analysis (PCA), these populations were found to be distantly located in different coordinates, indicating their genetic distinctness. Our results support that North-east region of India constitute a transition zone for both riverine and swamp buffalo populations, however, with quite distinctness of these mixed populations derived through different genetic pools. Polymorphic DRB3 locus in these riverine-swamp buffalo populations of North-East region also indicates their genetic richness.

Exploring polymorphism of prolactin gene and its possible association with repeat breeding in buffaloes

Prolactin (PRL), a polypeptide hormone is important for a number of biological functions. In livestock, genetic polymorphism of PRL has been found to be associated with various production and reproduction traits. Here, we explored genetic variability in regulatory and signal peptide encoding regions of PRL gene and its possible association with fertility trait in water buffalo (Bubalus bubalis) – a major livestock species of South Asia. Showing low genetic variability overall across the buffalo populations, a total of three SNPs – two in promoter (-C754T and -A516G) and one in exon 2 (C3666T) were identified in 2.2kb long region characterized from a pool of 12 buffalo populations. Importantly, the SNP at C3666T locus in exon 2 region caused a substitution of hydrophilic arginine (Arg, CGC) residue with hydrophobic cysteine (Cys, TGC) of signal peptide, leading to expansion of hydrophobic domain; and predictably found afflicting the cleavage site. Genotyping of two SNPs (-C754T and C3666T) was carried out by PCR-RFLP (BsrI) and tetra primer-ARMS PCR, respectively in 288 animals belonging to eight different riverine and swamp buffalo populations. The frequency of T allele, encoding hydrophobic cysteine in signal peptide at C3666T locus was found to be very high (0.882) in buffaloes, overall. Principle Coordinates Analysis revealed clustering of riverine buffalo populations (except Toda and Chilika), diverging from swamp type. A univariate logistic regression analysis conducted to explore association of buffalo PRL SNPs with fertility trait revealed that the genotypic frequencies for both loci (-C754T and C3666T) were found to have no significant difference between normal (n=25) and repeat (n=36) breeder Murrah buffaloes. Interestingly, a very high frequencies of T allele – responsible for Arg>Cys substitution – at C3666T locus were observed in both repeat (0.972) and normal (0.920) breeder groups. Since, maturation and secretion of the PRL hormone is strongly determined by signal peptide, our study provides an insight on the genetic variability in PRL promoter and signal peptide regions and its possible role in repeat breeding in buffaloes.

Gold at what cost? Another megaproject threatens biodiversity in the Amazon

The Xingu River, located in northern Brazil, is already under the impacts of one of the most harmful projects in the history of the Amazon – the Belo Monte hydroelectric dam. A new megaproject called the ‘Volta Grande Project’, led by Canadian gold mining company Belo Sun will be situated adjacent to the same stretch of the Xingu that is dewatered by the Belo Monte complex. Various aspects of the project are controversial. There are reports that the mining company acquired public lands illegally, the affected area has high biodiversity and endemism of several taxonomic groups, and mining operations would be approximately 9.5km from indigenous lands. Synergistic impacts of impoundment and mining operations are expected to dramatically alter the Xingu's biodiversity and ecosystem services that support indigenous people and riverine populations. Moreover, the mining activities will generate tons of toxic waste that will be stored in a high-risk tailings dam, which exposes the Xingu River to catastrophic consequences similar to those of the Doce River disaster.

Culture-Bound Syndromes of a Brazilian Amazon Riverine population: Tentative correspondence between traditional and conventional medicine terms and possible ethnopharmacological implications

Ethnopharmacological relevanceIt is not always possible to correlate the “emic” terms to the “etic” ones during ethnopharmacological surveys, especially regarding those related to Culture-Bound Syndromes (CBS). Nevertheless, it is the role of ethnopharmacology to address these correlations, since they are the basis for the understanding of potential bioactives. Aim and objectivesThis study reports the clinical manifestations and therapeutic resources used for the treatment of CBS among some riverine inhabitants of Brazilian Amazonia. An effort was made to establish a correspondence between the local “emic” terms of traditional medicine and the symptoms or diseases known by conventional medicine (“etic” terms). The ultimate goal was to gain insights to suggest further pharmacological studies with the local resources. Material and methodsFieldwork was guided by methods of anthropology, botany and zoology—with the assistance of a doctor—among the traditional healing experts in Jaú National Park (during 199 days in 1995) and Unini River Extractive Reserve (210 days from 2008 to 2012). ResultsFifty-nine healers of different kinds were interviewed: a prayer-maker, medium, natural resource expert, massage therapist, midwife and snakebite healer. The clinical manifestations and healing resources of the following CBS were collected: “mau olhado” (evil eye), “quebrante” (chipping); “espante” (fright or susto); “doença do ar” (air diseases); “vento caído” (fallen wind); “derrame” (leakage); “mãe do corpo” (mother of the body) and “panema” (unlucky). The first three seem to be local variations of other CBSs already described in Latin America. “doença do ar”, “vento caído”, “derrame” and “mãe do corpo” seem to be folk terms for known conventional medical disorders, while “panema” is a yet undescribed Brazilian CBS that is possibly related to dysthymic disorder or depression and deserves further investigation. Treatments included prayer rituals, fumigation, baths and oral remedies using 25 plants and 10 animals. ConclusionIt was possible to establish hypothetical correlations between CBS as described by the riverine population studied and some “etic” terms. The main importance of this is to help the proposition of target-oriented pharmacological studies of the natural resources used by these communities. Accordingly, the following plants are suggested to be submitted to further studies for antidepressant and anxiolytic activities: Siparuna guianensis, Mansoa alliacea, Leucas martinicensis, Petiveria alliacea, Annona montana and Alpinia nutans; for anti-seizure activity: Protium amazonicum, Protium aracouchini and Protium heptaphyllum; finally for antispasmodic activity: Leucas martinicensis.

Neogene paleogeography provides context for understanding the origin and spatial distribution of cryptic diversity in a widespread Balkan freshwater amphipod.

BackgroundThe Balkans are a major worldwide biodiversity and endemism hotspot. Among the freshwater biota, amphipods are known for their high cryptic diversity. However, little is known about the temporal and paleogeographic aspects of their evolutionary history. We used paleogeography as a framework for understanding the onset of diversification in Gammarus roeselii: (1) we hypothesised that, given the high number of isolated waterbodies in the Balkans, the species is characterised by high level of cryptic diversity, even on a local scale; (2) the long geological history of the region might promote pre-Pleistocene divergence between lineages; (3) given that G. roeselii thrives both in lakes and rivers, its evolutionary history could be linked to the Balkan Neogene paleolake system; (4) we inspected whether the Pleistocene decline of hydrological networks could have any impact on the diversification of G. roeselii.Material and MethodsDNA was extracted from 177 individuals collected from 26 sites all over Balkans. All individuals were amplified for ca. 650 bp long fragment of the mtDNA cytochrome oxidase subunit I (COI). After defining molecular operational taxonomic units (MOTU) based on COI, 50 individuals were amplified for ca. 900 bp long fragment of the nuclear 28S rDNA. Molecular diversity, divergence, differentiation and historical demography based on COI sequences were estimated for each MOTU. The relative frequency, geographic distribution and molecular divergence between COI haplotypes were presented as a median-joining network. COI was used also to reconstruct time-calibrated phylogeny with Bayesian inference. Probabilities of ancestors’ occurrence in riverine or lacustrine habitats, as well their possible geographic locations, were estimated with the Bayesian method. A Neighbour Joining tree was constructed to illustrate the phylogenetic relationships between 28S rDNA haplotypes.ResultsWe revealed that G. roeselii includes at least 13 cryptic species or molecular operational taxonomic units (MOTUs), mostly of Miocene origin. A substantial Pleistocene diversification within-MOTUs was observed in several cases. We evidenced secondary contacts between very divergent MOTUs and introgression of nDNA. The Miocene ancestors could live in either lacustrine or riverine habitats yet their presumed geographic localisations overlapped with those of the Neogene lakes. Several extant riverine populations had Pleistocene lacustrine ancestors.DiscussionNeogene divergence of lineages resulting in substantial cryptic diversity may be a common phenomenon in extant freshwater benthic crustaceans occupying areas that were not glaciated during the Pleistocene. Evolution of G. roeselii could be associated with gradual deterioration of the paleolakes. The within-MOTU diversification might be driven by fragmentation of river systems during the Pleistocene. Extant ancient lakes could serve as local microrefugia during that time.