The emissions from the civil aviation sector are a significant source of CO2 and air pollutants, which represent a serious threat to ambient air quality and public health. To gain a deeper understanding of civil aviation airport emissions, it is imperative to develop a precise and comprehensive emission inventory of China's civil aviation airports. However, there are limited studies dedicated to analyzing and verifying the accuracy and completeness of China's civil aviation emission inventory. Here, this study explored pollution characteristics from temporal trends and spatial distribution perspectives based on a previously developed 2019–2020 high-resolution air pollution and CO2 emission inventory of the landing and take-off (LTO) cycle of civil aviation airports in China and the ChinaHighAirPollutants (CHAP) dataset. Besides, this study established an empirical model to evaluate the relationship between the air pollutant emissions of China's civil aviation sector in 2019–2020 and the pollutant concentration from the CHAP dataset. Compared to those in 2019, the total NOx, CO, PM, and SO2 emissions during the LTO phase in China's civil aviation sector in 2020 decreased by 14.29%–24.32%, and the average concentrations of NO2, CO, PM10, and SO2 in 2020 decreased by 6.33%–9.45%. The eastern, central, and southern regions of China are characterized by high emissions of pollutants, a phenomenon closely related to the economic prosperity and tourism development in these areas. They tend to boast higher route densities, increasing air transport activity and consequently resulting in elevated emissions. In addition, NOx had the highest correlation coefficient in the empirical model, with a correlation coefficient of 0.603 in 2019. Our findings provide new insights into civil aviation emissions in China from the analysis of the emission inventory of air pollutants and the CHAP dataset and provide a new method for verifying the accuracy and completeness of China's civil aviation emission inventory.