Large-eddy and direct numerical simulations generate vast data sets that are challenging to interpret, even for simple geometries at low Reynolds numbers. This has increased the importance of automatic methods for extracting significant features to understand physical phenomena. Traditional techniques like the proper orthogonal decomposition (POD) have been widely used for this purpose. However, recent advancements in computational power have allowed for the development of data-driven modal reduction approaches. This paper discusses four applications of deep neural networks for aerodynamic applications, including a convolutional neural network autoencoder, to analyze unsteady flow fields around a circular cylinder at Re = 100 and a supersonic boundary layer with Tollmien–Schlichting waves. The autoencoder results are comparable to those obtained with POD and spectral POD. Additionally, it is demonstrated that the autoencoder can compress steady hypersonic boundary-layer profiles into a low-dimensional vector space that is spanned by the pressure gradient and wall-temperature ratio. This paper also proposes a convolutional neural network model to estimate velocity and temperature profiles across different hypersonic flow conditions.