Reduced Height Genes Research Articles

Genetic analysis of late-maturity α-amylase in twelve wheat populations

Main conclusionGenetic loci, particularly those with an effect in the independent panel, could be utilised to further reduce LMA expression when used with favourable combinations of genes known to affect LMA.Late maturity α-amylase (LMA) is a grain quality defect involving elevated α-amylase within the aleurone of wheat (Triticum aestivum L.) grains. The genes known to affect expression are the reduced height genes Rht-B1 (chromosome 4B) and Rht-D1 (chromosome 4D), and an ent-copalyl diphosphate synthase gene (LMA-1) on chromosome 7B. Other minor effect loci have been reported, but these are poorly characterised and further genetic understanding is needed. In this study, twelve F4-derived populations were created through single seed descent, genotyped and evaluated for LMA. LMA-1 haplotype C and the Rht-D1b allele substantially reduced LMA expression. The alternative dwarfing genes Rht13 and Rht18 had no significant effect on LMA expression. Additional quantitative trait loci (QTL) were mapped at 16 positions in the wheat genome. Effects on LMA expression were detected for four of these QTL in a large independent panel of Australian wheat lines. The QTL detected in mapping populations and confirmed in the large independent panel provide further opportunity for selection against LMA, especially if combined with Rht-D1b and/or favourable haplotypes of LMA-1.

Development and validation of diagnostic markers for the reduced height gene Rht8 in wheat

AbstractWheat (Triticum aestivum L.) production is necessary for global food and nutrition security. Reducing plant height is an effective strategy to increase lodging resistance, harvest index, and eventually wheat yield. Rht8 is a gibberellic acid–sensitive reduced height (Rht) gene and has been cloned. Rht8 encodes a ribonuclease H‐like (RNHL) superfamily protein that reduces plant height without reduction in coleoptile length. High‐throughput diagnostic markers are not available for precise selection of RNHL in wheat breeding. In this study, we found that different cultivars may carry 1–3 copies of RNHLs on chromosome 2D, and only 2D carries the semi‐dwarf allele of RNHL although the wild‐type RNHL allele is detected in several other chromosomes. We developed two kompetitive allele specific PCR (KASP) markers, Rht8‐KASP‐V2 and Rht8‐KASP‐V3, based on the causal variation in RNHL. The two markers co‐segregated with plant height in a recombinant inbred population and were validated in a panel of hard winter wheat breeding lines from the 2022 Regional Germplasm Observation Nursery and Regional Performance Nursery. Rht8 has not been extensively deployed in US hard winter wheat and development of the diagnostic KASP markers will facilitate Rht8 transfer to US wheat cultivars.

Evaluation of phosphate rock as the only source of phosphorus for the growth of tall and semi-dwarf durum wheat and rye plants using digital phenotyping.

Phosphorus nutrition is important for obtaining high yields of crop plants. However, wheat plants are known to be almost incapable of taking up phosphorus from insoluble phosphate sources, and reduced height genes are supposed to decrease this ability further. We performed a pot experiment using Triticum durum Desf. tall spring variety LD222, its near-isogenic semidwarf line carrying Rht17 (Reduced height 17) gene, and winter rye (Secale cereale L.) variety Chulpan. The individual plants were grown in quartz sand. The phosphorus was provided either as phosphate rock powder mixed with sand, or as monopotassium phosphate solution (normal nutrition control) or was not supplemented at all (no-phosphorus control). Other nutrients were provided in soluble form. During experiment the plants were assessed using the TraitFinder (Phenospex Ltd., Heerlen, Netherlands) digital phenotyping system for a standard set of parameters. Double scan with 90 degrees turns of pots around vertical axis vs. single scan were compared for accuracy of phenotyping. The phenotyping showed that at least 20 days of growth after seedling emergence were necessary to get stable differences between genotypes. After this initial period, phenotyping confirmed poor ability of wheat to grow on substrate with phosphate rock as the only source of phosphorus compared to rye; however, Rht17 did not cause an additional reduction in growth parameters other than plant height under this variant of substrate. The agreement between digital phenotyping and conventionally measured traits was at previously reported level for grasses (R2 = 0.85 and 0.88 for digital biomass and 3D leaf area vs. conventionally measured biomass and leaf area, single scan). Among vegetation indices, only the normalized differential vegetation index (NDVI) and the green leaf index (GLI) showed significant correlations with manually measured traits, including the percentage of dead leaves area. The double scan improved phenotyping accuracy, but not substantially.

Fine mapping of reduced height locus RHT26 in common wheat.

We fine mapped RHT26 for plant height in wheat, confirmed its genetic effects in a panel of wheat cultivars and predicted candidate genes. Development of wheat cultivars with appropriate plant height (PH) is an important goal in breeding. Utilization of semi-dwarfing genes Rht-B1b and Rht-D1b triggered wheat Green Resolution in the 1960s. Since these genes also bring unfavorable features, such as reduced coleoptile length and grain weight, it is necessary to identify alternative reduced height genes without yield penalty. Here we constructed a high-density genetic map of a recombinant inbred line population derived from the cross of Zhongmai175 and Lunxuan987 and detected a stable genetic locus for PH, designated RHT26, on chromosome arm 3DL in all of six environments, accounting for 6.8-14.0% of the phenotypic variances. RHT26 was delimited to an approximate 1.4Mb physical interval (517.1-518.5Mb) using secondary mapping populations derived from 22 heterozygous recombinant plants and 24 kompetitive allele-specific PCR markers. Eleven high-confidence genes were annotated in the physical interval according to the Chinese Spring reference genome, and four of them were predicted as candidates for RHT26 based on genome and transcriptome sequencing analyses. We also confirmed that RHT26 had significant effects on PH, but not grain yield in a panel of wheat cultivars; its dwarfing allele has been frequently used in wheat breeding. These findings lay a sound foundation for map-based cloning of RHT26 and provide a breeding-applicable tool for marker-assisted selection.

Fine mapping of the reduced height gene Rht22 in tetraploid wheat landrace Jianyangailanmai (Triticum turgidum L.)

Rht22 was fine mapped in the interval of 0.53-1.48Mb on 7AS, which reduces cell number of internode to cause semi-dwarfism in Jianyangailanmai. As a valuable germplasm resource for wheat genetic improvement, tetraploid wheat has several reduced height (Rht) and enhanced harvest index genes. Rht22, discovered in Jianyangailanmai (JAM, Triticum turgidum L., 2n = 4x = 28, AABB), significantly increases the spikelet number per spike, but its accurate chromosomal position is still unknown. In this study, a high-density genetic map was constructed using specific-length amplified fragment sequencing in an F7 RIL_DJ population, which was derived from a cross between dwarf Polish wheat (T. polonicum L., 2n = 4x = 28, AABB) and JAM. Two plant height loci, Qph.sicau-4B and Qph.sicau-7A, were mapped on chromosomes 4BS and 7AS, respectively. Qph.sicau-7A was mapped to the 0.33-4.46Mb interval on 7AS and likely represents the candidate region of Rht22. Fine mapping confirmed and narrowed Rht22 on chromosome arm 7AS between Xbag295.s53 and Xb295.191 in three different populations. The physical region ranged from 0.53 to 1.48Mb and included 18 candidate genes. Transcriptome analysis of two pairs of near-isogenic lines revealed that 135 differentially expressed genes (DEGs) were associated with semi-dwarfism. Of these, the expression of 83 annotated DEGs involved in hormones synthesis and signal transduction, cell wall composition, DNA replication, microtubule and phragmoplast arrays was significantly down-regulated in the semi-dwarf line. Therefore, Rht22 causes semi-dwarfism in JAM by disrupting these cellular processes, which impairs cell proliferation and reduces internode cell number.

An Analysis of the Genetic Relation between Photosynthesis and Yield-Related Traits in Wheat

A recombinant inbred line population, derived from a cross between a high light-tolerant wheat Triticum aestivum cv. Xiaoyan 54 and a high yielding, but high light-sensitive variety, Jing 411, was used to explore the genetic relation between photosynthesis and grain yield-related traits. The net CO2 assimilation rate, chlorophyll content, chlorophyll a fluorescence parameters, leaf area index, plant height, spike number, biomass, grain yield, and harvest index were evaluated in the field across two consecutive years. The results reveal that a total of 57 quantitative trait loci (QTL) are found to be associated with the investigated traits. They distributed on almost all 21 chromosomes, except for chromosomes 5D, 6D, 7A, and 7D. The phenotypic variance explained by a single QTL ranged from 9.3% to 39.9% depending on traits and QTL. Of these QTL, 12 QTL clusters were found to regulate at least 2 of the investigated traits, which distributed on 8 chromosomes, 1A, 1B, 2A, 2B, 2D, 3A, 3B, 4B and 5A. Seven QTL clusters were associated with both photosynthesis and grain yield-related traits, indicative of their genetic relation. Two QTL clusters on 2D and 4B were co-located with two reduced-height genes, Rht8 and Rht-B1b, respectively. These QTL clusters may be used as potential targets for wheat radiation use efficiency improvement in the future.

16A system of molecular markers to identify alleles of the Rht-B1 and Rht-D1 genes controlling reduced height in bread wheat.

Mutant alleles of the Rht-B1 and Rht-D1 (Reduced height) genes are widely used in bread wheat breeding for the development of intensive-type cultivars. These genes and their f lanking regions have been sequenced and the point mutations leading to the nonsense codons (Rht-B1b, Rht-B1e, Rht-B1p and Rht-D1b alleles) and various insertions (Rht-B1c, Rht-B1h and Rht-B1i-1) associated with a change in plant height have been described. DNA-markers based on the allele-specif ic PCR have been developed to identify single-nucleotide changes. However, the use of such technique imposes stringent PCR conditions, and the resulting data are not always unambiguous. An alternative can be found in the CAPS technology: it detects differences in sequences by digesting PCR products. In the absence of restrictases capable of digesting DNA at the point mutation site, restriction sites can be introduced into the primer sequence (derived CAPS). The aim of this study was to propose a system of CAPS-, dCAPS- and STS-markers for identifying alleles of the reduced height genes frequently used in breeding programs. Three CAPS have been developed to identify the Rht-B1b, Rht-D1b, Rht-B1p alleles, as well as two dCAPS for Rht-B1b, Rht-B1e. STS-markers for the insertion-containing alleles Rht-B1c, Rht-B1h and Rht-B1i-1 have been selected from publications. The proposed markers were tested during the genotyping of 11 bread wheat accessions from the VIR collection with the abovementioned mutant alleles and the wild-type Rht-B1a and Rht-D1a. The presence of nonsense mutations was also conf irmed by the results of allele-specif ic PCR. This marker system, along with the existing ones, can be used to identify dwarf ing alleles of the Rht-B1 and Rht-D1 genes in bread wheat for genetic screening of accessions from ex situ collections and/or for marker-assisted selection.

Virus-Mediated Transient Expression Techniques Enable Functional Genomics Studies and Modulations of Betalain Biosynthesis and Plant Height in Quinoa.

Quinoa (Chenopodium quinoa), native to the Andean region of South America, has been recognized as a potentially important crop in terms of global food and nutrition security since it can thrive in harsh environments and has an excellent nutritional profile. Even though challenges of analyzing the complex and heterogeneous allotetraploid genome of quinoa have recently been overcome, with the whole genome-sequencing of quinoa and the creation of genotyped inbred lines, the lack of technology to analyze gene function in planta is a major limiting factor in quinoa research. Here, we demonstrate that two virus-mediated transient expression techniques, virus-induced gene silencing (VIGS) and virus-mediated overexpression (VOX), can be used in quinoa. We show that apple latent spherical virus (ALSV) can induce gene silencing of quinoa phytoene desaturase (CqPDS1) in a broad range of quinoa inbred lines derived from the northern and southern highland and lowland sub-populations. In addition, we show that ALSV can be used as a VOX vector in roots. Our data also indicate that silencing a quinoa 3,4-dihydroxyphenylalanine 4,5-dioxygenase gene (CqDODA1) or a cytochrome P450 enzyme gene (CqCYP76AD1) inhibits betalain production and that knockdown of a reduced-height gene homolog (CqRHT1) causes an overgrowth phenotype in quinoa. Moreover, we show that ALSV can be transmitted to the progeny of quinoa plants. Thus, our findings enable functional genomics in quinoa, ushering in a new era of quinoa research.

The Allelic Diversity of the Gibberellin Signaling Pathway Genes in Aegilops tauschii Coss.

Gibberellin-insensitive reduced height genes are widely spread in modern wheat varieties, making them resistant to lodging under conditions of intensive farming. However, the limited diversity of these genes present in wheat germplasm can limit the adaptability of newly created cultivars to the changing climate. The diversity of the gibberellin signaling pathway genes involved in plant height control—Reduced height 1 (Rht-D1), Gibberellin-insensitive dwarf 1 (Gid1-D) and Gibberellin-insensitive dwarf 2 (Gid2-D)—was studied in the diploid wild goatgrass Aegilops tauschii Coss., one of the ancestral species of the bread wheat (Triticum aestivum L.) and the donor of its D subgenome, using high-throughput sequencing. The examination of 24 Ae. tauschii accessions of different geographical origins revealed a large number of new alleles (haplotypes) not found in bread wheat varieties. Some of the detected polymorphisms lead to changes in the amino acid sequence of proteins. Four isoforms (amino acid sequence variants) were found for the RHT-D1 protein, and two isoforms—for the GID1 and GID2 proteins, each. An analysis of the co-occurrence frequencies of various isoforms of the three proteins showed that their combinations were not random in Ae. tauschii, which may indicate the functional significance of their differences. New alleles of the Rht-D1, Gid1-D, and Gid2-D genes are promising for introgression into bread wheat and studying their effect on plant height and adaptability.

A 36 Mb terminal deletion of chromosome 2BL is responsible for a wheat semi-dwarf mutation

Reduced plant height is one of the most important traits related to lodging resistance and crop yield. The use of reduced height genes has been one of the main features in breeding modern high-yielding wheat varieties with less lodging. A spontaneous dwarf mutant DD399 was identified in a high yielding, gibberellic acid (GA)-insensitive, lodging-resistant variety Nongda 399 (ND399). Significant differences in upper internode lengths between mutant DD399 and wild type ND399 were caused by reduced cell elongation. The plant height of ND399 × DD399 F1 hybrids was intermediate between the parents, indicating incomplete dominance or a dose–response effect of a reduced height gene. Plant height showed continuous distribution in the F2 population, and segregation distortion was observed among the 2292 F2:3 progenies. The reduced height mutation was characterized by Illumina 90 K iSelect SNP genotyping and bulked segregant RNA-Seq (BSR-Seq) analysis of the segregating population. A concentrated cluster of polymorphic SNPs associated with the reduced height phenotype was detected in the distal region of chromosome arm 2BL. Co-segregation of reduced height phenotype with the clustered markers revealed a 36 Mb terminal deletion of chromosome 2BL in mutant DD399.

Temperature response of wheat affects final height and the timing of stem elongation under field conditions.

In wheat, temperature affects the timing and intensity of stem elongation. Genetic variation for this process is therefore important for adaptation. This study investigates the genetic response to temperature fluctuations during stem elongation and its relationship to phenology and height. Canopy height of 315 wheat genotypes (GABI wheat panel) was scanned twice weekly in the field phenotyping platform (FIP) of ETH Zurich using a LIDAR. Temperature response was modelled using linear regressions between stem elongation and mean temperature in each measurement interval. This led to a temperature-responsive (slope) and a temperature-irresponsive (intercept) component. The temperature response was highly heritable (H2=0.81) and positively related to a later start and end of stem elongation as well as final height. Genome-wide association mapping revealed three temperature-responsive and four temperature-irresponsive quantitative trait loci (QTLs). Furthermore, putative candidate genes for temperature-responsive QTLs were frequently related to the flowering pathway in Arabidopsis thaliana, whereas temperature-irresponsive QTLs corresponded to growth and reduced height genes. In combination with Rht and Ppd alleles, these loci, together with the loci for the timing of stem elongation, accounted for 71% of the variability in height. This demonstrates how high-throughput field phenotyping combined with environmental covariates can contribute to a smarter selection of climate-resilient crops.

Genetic analysis and QTL mapping of a novel reduced height gene in common wheat (Triticum aestivum L.)

Low stature in wheat is closely associated with lodging resistance, and this impacts harvest index and grain yield. The discovery of novel dwarfing or semi-dwarfing genes can have great significance for dwarf wheat breeding. In this study, we identified an EMS-induced dwarf wheat mutant JE0124 from the elite cultivar Jing411. JE0124 possesses increased stem strength and a 33% reduction in plant height compared with wild type. Gibberellic acid (GA) treatment analysis suggested that JE0124 was GA-sensitive. Analysis of the frequency distribution of plant height in four F2 populations derived from crosses between JE0124 and the relatively taller varieties Nongda 5181 and WT indicated that the dwarfism phenotype was quantitatively inherited. We used two F2 populations and 312 individuals from the reciprocal cross of Nongda 5181 and JE0124 to map the quantitative trait locus (QTL) for reduced height to a 0.85-cM interval on chromosome 2DL. The mapping was done by using a combination of 660K SNP array-based bulked segregant analysis (BSA) and genetic linkage analysis, with logarithm of odds (LOD) scores of 5.34 and 5.78, respectively. Additionally, this QTL accounted for 8.27–8.52% of the variation in the phenotype. The dwarf mutant JE0124 and the newly discovered dwarfing gene on chromosome 2DL in this study will enrich genetic resources for dwarf wheat breeding.

Identification of genotypes possessing GA responsive reduced height genes in bread wheat (Triticum aestivum)

The present study was conducted during years 2017-18 and 2018-19 involving 60 wheat genotypes including advance lines and released varieties. Based on the coleoptile length, these were categorised for coleoptile length as short (2.5-4.5 cm), medium (4.6-6.5 cm) and long (6.6-9 cm) respectively. Small and medium coleoptile length genotypes had comparable plant height (100.07cm and 99.29 cm, respectively) whereas, longer coleoptile genotypes were in general taller (103.78cm) numerically and for each class, the speed of germination was almost similar.A set of linked SSRs markers was used to screen the genotypes for molecular characterization based on GA responsive genes. In wheat, longer coleoptile length with reduced height is primarily controlled by GA responsive reduced height genes like Rht8, Rht12 etc., therefore, the material was screened to identify genotypes possessing GA responsive reduced height genes with available molecular markers. Molecular screening for Rht genes revealed five Rht8 positive genotypes having longer coleoptile length and good seedling vigour. Thus, Rht8 genes had positive effect on coleoptile length and had no detrimental effect on root length of seedling and provided better field emergence in field. Hence, these genotypes can be used for the development of variety for dryland agriculture and underconservation agriculture practices.

Selective recombination close to the semi-dwarfing locus through bulk-population in the hybrid between Triticum aestivum and Triticum polonicum

The Rht-B1 locus on the short arm of chromosome 4B has multiple alleles that give phenotypic expressions ranging from semi-dwarfism to extreme dwarfism. Allelic variation at Rht-B1 locus was also found in semi-dwarf Triticum polonicum L. cv. IC12196. The semi-dwarf allele from IC12196 could be an alternative source of reduced height gene. The experimental lines derived from the cross between Triticum aestivum L. cv. Novosibirskaya 67 (N67) and IC12196 were analyzed concerning the introgression of semi-dwarf allele from IC12196. The aim of the present study was to assess the selection for the semi-dwarfism and recombination around the locus of semi-dwarf gene using microsatellite markers on the short arm of chromosome 4B. The Rht-IC12196 allele was allelic to Rht-B1b allele, and microsatellite markers indicated that the Rht-IC12196 allele was linked with the markers, Xbarc1045 and Xgwm113 on the short arm of chromosome 4B. Out of 112 hexaploid introgression lines, 29 lines were semi-dwarf. The Xgwm113 and Xhbg226 markers flanking the Rht-B1 locus were replaced by N67 allele in the majority of introgression lines. Although it did not intend, the region around the Rht-B1 locus was highly selectable, but on short arms of chromosome 4B, Rht-IC12196 gene near the locus Xgwm113 explained a large part of the phenotypic variation originated from N67-allele and non-parental allele in tall accessions. The Rht-B1a allele was favorable in the consequence of bulk population breeding and the frequency of Rht-B1a allele was 73% in the hexaploid introgression lines.
 J. Bangladesh Agril. Univ. 17(2): 148–152, June 2019

Rht8 gene as an alternate dwarfing gene in elite Indian spring wheat cultivars.

Optimizing wheat height to maximize yield has been an important aspect which is evident from a successful example of green revolution. Dwarfing genes (Rht) are known for yield gains due to lodging resistance and partitioning of assimilates into ear. The available and commercially exploited sources of dwarfism in Indian spring wheat are Rht1 and Rht2 genes inspite of availability of over 20 dwarfing genes. Rht8 a Gibberellic acid sensitive dwarfing gene is another reduced height gene commercially exploited in some Mediterranean countries. Two F2 populations segregating for Rht1 and Rht8 genes with each comprising 398 and 379 plants were developed by crossing European winter wheat cultivars Beauchamp and Capitole with Indian spring wheat cultivar PBW 621. Different genotypic combinations for Rht1 and Rht8 genes were selected from these populations through linked molecular markers and selected F3:4 lines were evaluated for various agronomic traits in a replicated trial. Reduction in plant height with Rht8 and Rht1 averaged 2.86% and 13.3% respectively as compared to the group of lines lacking dwarfing gene. Reduction was spread along all the internodes of wheat culm and reduction was lower as progress towards the lower internode. Grain number per spike and highest yield was observed in lines carrying only Rht1 gene. Reduction in plant biomass was observed with either of the dwarfing gene. Longest coleoptile length and seedling shoot length averaged 4.4 ± 0.09 cm and 19.5 ± 0.48, respectively was observed in lines lacking any of the dwarfing gene. Negligible reduction of 6.75% and 2.84% in coleoptile length and seedling shoot length, respectively was observed in lines carrying only Rht8 gene whereas F3:4 lines with Rht1 gene showed 21.64% and 23.35% reduction in coleoptile length and seedling shoot length, respectively. Additive effect of genes was observed as double dwarfs showed 43.31% and 43.34% reduction in coleoptile length and seedling shoot length.

Relationships between leaf morpho‐anatomy, water status and cell membrane stability in leaves of wheat seedlings subjected to severe soil drought

AbstractThe impact of the genotype‐specific leaf morphological and anatomical characteristics on the ability of wheat plants to preserve leaf water balance and cell membranes stability under drought stress was investigated. Seedlings of six modern semi‐dwarf (carriers of Rht, Reduced height genes) and six old tall bread wheat varieties were subjected to soil drought by withholding watering for 6 days. Morpho‐anatomical traits (leaf area, perimeter, thickness, stomata and trichome density) of daily watered (control) plants were characterized by light microscopy, scanning and image analyses. The leaf water status in both control and stressed plants was determined by measuring the relative water content (RWC). The leaf cell membranes stability in stressed plants was estimated by conductometric determination of the membranes injury index. On average, the modern semi‐dwarf varieties had less leaf area and leaf perimeter, and less dissection index, a parameter characterizing the leaf shape. Under drought stress, the modern genotypes maintained better water balance evidenced by significantly higher leaf RWC and better‐preserved the cell membranes stability supported by significantly lower Injury index. The correlations between morpho‐anatomical traits in control plants and drought tolerance‐related traits showed that the higher the leaf dissection index (i.e. more oblong leaves), the greater the water loss and the leaf membrane damages after desiccation were. The effect of shape of the evaporating surface on the water loss was modelled using wet filter paper. Similar to plant leaves, the evaporation and, respectively, water loss from paper pieces of more oblong shape (i.e. higher dissection index) was more intensive. The elucidation of the impact of the leaf shape on transpiration might contribute to better understanding of the mechanisms used by plants to maintain water reserves during drought stress and could be a basis for developing of simple and fast screening methods aiding the selection of drought tolerant genotypes.

Cluster Analysis of Historical and Modern Hard Red Spring Wheat Cultivars Based on Parentage and HPLC Analysis of Gluten‐Forming Proteins

Thirty hard red spring (HRS) wheat cultivars released between 1910 and 2013 were analyzed to determine how they cluster in terms of parentage and HPLC analysis of gliadins and unreduced proteins. Markers for reduced height genes were assessed to determine associations between semidwarfism and protein composition, as well as quality characteristics. In terms of parentage, the clusters formed were grouped according to release year and semidwarfism. Farinograph development time and stability showed significant (P ≤ 0.05) differences between clusters, indicating improvement of mixing characteristics over time. Flour ash content was significantly different (P ≤ 0.05) between clusters, indicating improved milling quality. The clusters based on the gliadin reverse‐phase HPLC peak binary data did not group cultivars according to release year and the semidwarf characteristic. However, cultivars were grouped according to year in the absorbance area based dendrogram. The clusters based on absorbance area of size‐exclusion HPLC showed significant (P ≤ 0.05) differences for release year, the semidwarf characteristic, and farinograph stability. Overall, the results indicate that the introduction of reduced height genes accompanied the improvements of dough mixing and breadmaking quality characteristics, without altering the composition of gliadin proteins over the last 100 years of HRS wheat breeding.

Genetic variation for flowering time and height reducing genes and important traits in western Canadian spring wheat

Genetic variation is prerequisite for wheat improvement. High grain yield and protein content and early maturity are some of the major objectives in global as well as Canadian wheat breeding programs. We investigated genetic diversity for earliness related and plant height reducing (Rht) genes in 82 spring wheat cultivars, registered in western Canada, through eight diagnostic DNA markers. Allelic variation was observed at the Vrn-A1, Vrn-B1, Vrn-D1 and Ppd-D1 loci but not at Ppd-A1 and Ppd-B1 loci in the 82 cultivars. Spring type allele of Vrn-A1 was present in 94 % cultivars, whereas only two cultivars carried spring allele of Vrn-D1. Among the four earliness related genes, the most frequent combination was Vrn-A1a, Vrn-B1, vrn-D1 and Ppd-D1b, which was found in 32 cultivars. As for the Rht genes, eight cultivars had Rht-B1b and 13 cultivars had Rht-D1b. All cultivars carrying dominant allele of Vrn-B1, photoperiod-insensitive allele of Ppd-D1 and height reducing allele of Rht-1 had shorter plants and higher grain yield but lower grain protein content. Days to heading and maturity showed positive genetic (rg = 0.65) and phenotypic (rp = 0.44) correlation, and were also positively correlated with grain yield and kernel weight but negatively correlated with test weight and protein content. Plant height was positively correlated with grain protein content (rg = 0.53; rp = 0.42), but negatively correlated with grain yield (rg = −0.47; rp = −0.14). Grain yield and protein content showed negative genetic correlation (rg = −0.57). Among the sixty cultivars from Canada Western Red Spring Class released over 100 years, the newest cultivar yielded 23 % more grain and had 15 % higher grain protein than the oldest cultivar ‘Red Fife’. Breeders in western Canada have incorporated vernalization and photoperiod insensitive and Rht genes in modern cultivars to promote early maturity, to make use of off-season nurseries abroad, and to improve lodging tolerance.

Characterization of a Putative New Semi-Dominant Reduced Height Gene, Rht_NM9, in Wheat (Triticum aestivum L.)

Plant height is an important agronomic trait in cereal crops, and can affect both plant architecture and grain yield. New dwarfing genes are required for improving the genetic diversity of wheat. In this study, a novel dwarf mutant, NM9, was created by treating seeds of the wheat variety NAU9918 with ethyl methanesulfonate (EMS). NM9 showed obvious phenotypic changes, which were distinct from those caused by other dwarfing genes, especially the reduced plant height, increased effective tiller number, and elongated spike and grain length. The reduced plant height in NM9 was attributable to a semi-dominant dwarfing gene Rht_NM9, which was flanked by two closely linked SNP markers, SNP34 and SNP41, covering an 8.86-Mb region on the chromosome arm 2AS. The results of gibberellic acid (GA) sensitivity evaluation, comparative genomics analysis and allelism test indicated that Rht_NM9 was neither allelic to Rht7 and Rht21 nor homoeoallelic to Rht8, so Rht_NM9 was proposed to be a new dwarfing locus on the homoeologous group 2 chromosomes of wheat. Rht_NM9 has a negative effect on plant height and positive effects on effective tiller number and grain size, thus, Rht_NM9 could be used for elucidating the mechanisms underlying plant architecture and grain development.

Characterization of a novel reduced height gene (Rht23) regulating panicle morphology and plant architecture in bread wheat

Plant height and spikelet density are important agronomic traits related to plant architecture and grain yield in wheat. The development of wheat mutants not only provided new genetic resources for wheat improvement, but also facilitated our understanding of the regulation of these traits at the molecular level. Here, we report the identification of a dwarf mutant with a compact spike. NAUH164, produced from ethyl methyl sulfonate treatment of wheat variety Sumai 3, has reduced plant height and shortened spike length. Microscopic observations showed that the mutant has an atypical vascular bundle arrangement and overall smaller cell volumes. Sensitivity of seedlings to exogenous gibberellin was not changed, and plant height was not restored to the level of the wildtype. Dwarfness and compact spike were controlled by a single dominant gene that was designated Rht23, which was mapped 4.7 cM distal to SSR marker Gdm63 and 11.1 cM proximal to Barc110 on chromosome 5DL. Comparative sequence analysis of the co-linear regions in common wheat and Aegilops taushii indicated that Rht23 occurs in a physical interval of 8.5 Mb.