Magnetic Resonance Imaging Reconstruction Research Articles

MRI reconstruction with enhanced self-similarity using graph convolutional network

BackgroundRecent Convolutional Neural Networks (CNNs) perform low-error reconstruction in fast Magnetic Resonance Imaging (MRI). Most of them convolve the image with kernels and successfully explore the local information. Nonetheless, the non-local image information, which is embedded among image patches relatively far from each other, may be lost due to the limitation of the receptive field of the convolution kernel. We aim to incorporate a graph to represent non-local information and improve the reconstructed images by using the Graph Convolutional Enhanced Self-Similarity (GCESS) network.MethodsFirst, the image is reconstructed into the graph to extract the non-local self-similarity in the image. Second, GCESS uses spatial convolution and graph convolution to process the information in the image, so that local and non-local information can be effectively utilized. The network strengthens the non-local similarity between similar image patches while reconstructing images, making the reconstruction of structure more reliable.ResultsExperimental results on in vivo knee and brain data demonstrate that the proposed method achieves better artifact suppression and detail preservation than state-of-the-art methods, both visually and quantitatively. Under 1D Cartesian sampling with 4 × acceleration (AF = 4), the PSNR of knee data reached 34.19 dB, 1.05 dB higher than that of the compared methods; the SSIM achieved 0.8994, 2% higher than the compared methods. Similar results were obtained for the reconstructed images under other sampling templates as demonstrated in our experiment.ConclusionsThe proposed method successfully constructs a hybrid graph convolution and spatial convolution network to reconstruct images. This method, through its training process, amplifies the non-local self-similarities, significantly benefiting the structural integrity of the reconstructed images. Experiments demonstrate that the proposed method outperforms the state-of-the-art reconstruction method in suppressing artifacts, as well as in preserving image details.

Cross-contrast mutual fusion network for joint MRI reconstruction and super-resolution

Magnetic Resonance Imaging (MRI) is a widely used medical imaging technique that has become an essential tool for diagnosing various diseases and visualizing internal structures and tissues in the human body. MRI reconstruction and super-resolution are two techniques that can enhance image quality and accelerate the imaging process. However, current methods perform these tasks independently and fail to consider the correlations between them. Additionally, multi-contrast SR methods typically concatenate features from different contrasts without considering their correlation. In this paper, we propose a novel Cross-contrast Mutual Fusion Network (CMF-Net) that performs joint MRI reconstruction and super-resolution by enabling mutual propagation of feature representations between the two tasks. The CMF-Net framework consists of two stages: the first stage focuses on fusing multi-contrast features, while the second stage aims to learn task-specific information for joint MRI reconstruction and super-resolution. We propose a Multi-contrast Feature Aggregation (MFA) module to facilitate the integration of multi-contrast features. This module captures multi-scale information from auxiliary contrast to enhance the feature representation’s capability. Furthermore, a Multi-task Mutual Fusion (MMF) module is presented to integrate task-specific features, which explores the correlation between the two tasks to improve MR super-resolution performance. We evaluate the proposed CMF-Net approach on two public MR datasets. Quantitative and qualitative results demonstrate that our CMF-Net outperforms other state-of-the-art methods.

Dual-domain faster Fourier convolution based network for MR image reconstruction

Deep learning methods for fast MRI have shown promise in reconstructing high-quality images from undersampled multi-coil k-space data, leading to reduced scan duration. However, existing methods encounter challenges related to limited receptive fields in dual-domain (k-space and image domains) reconstruction networks, rigid data consistency operations, and suboptimal refinement structures, which collectively restrict overall reconstruction performance. This study introduces a comprehensive framework that addresses these challenges and enhances MR image reconstruction quality. Firstly, we propose Faster Inverse Fourier Convolution (FasterIFC), a frequency domain convolutional operator that significantly expands the receptive field of k-space domain reconstruction networks. Expanding the information extraction range to the entire frequency spectrum according to the spectral convolution theorem in Fourier theory enables the network to easily utilize richer redundant long-range information from adjacent, symmetrical, and diagonal locations of multi-coil k-space data. Secondly, we introduce a novel softer Data Consistency (softerDC) layer, which achieves an enhanced balance between data consistency and smoothness. This layer facilitates the implementation of diverse data consistency strategies across distinct frequency positions, addressing the inflexibility observed in current methods. Finally, we present the Dual-Domain Faster Fourier Convolution Based Network (D2F2), which features a centrosymmetric dual-domain parallel structure based on FasterIFC. This architecture optimally leverages dual-domain data characteristics while substantially expanding the receptive field in both domains. Coupled with the softerDC layer, D2F2 demonstrates superior performance on the NYU fastMRI dataset at multiple acceleration factors, surpassing state-of-the-art methods in both quantitative and qualitative evaluations.

DFUSNN: zero-shot dual-domain fusion unsupervised neural network for parallel MRI reconstruction

Objective. Recently, deep learning models have been used to reconstruct parallel magnetic resonance (MR) images from undersampled k-space data. However, most existing approaches depend on large databases of fully sampled MR data for training, which can be challenging or sometimes infeasible to acquire in certain scenarios. The goal is to develop an effective alternative for improved reconstruction quality that does not rely on external training datasets. Approach. We introduce a novel zero-shot dual-domain fusion unsupervised neural network (DFUSNN) for parallel MR imaging reconstruction without any external training datasets. We employ the Noise2Noise (N2N) network for the reconstruction in the k-space domain, integrate phase and coil sensitivity smoothness priors into the k-space N2N network, and use an early stopping criterion to prevent overfitting. Additionally, we propose a dual-domain fusion method based on Bayesian optimization to enhance reconstruction quality efficiently. Results. Simulation experiments conducted on three datasets with different undersampling patterns showed that the DFUSNN outperforms all other competing unsupervised methods and the one-shot Hankel-k-space generative model (HKGM). The DFUSNN also achieves comparable results to the supervised Deep-SLR method. Significance. The novel DFUSNN model offers a viable solution for reconstructing high-quality MR images without the need for external training datasets, thereby overcoming a major hurdle in scenarios where acquiring fully sampled MR data is difficult.

Misalignment-Resistant Deep Unfolding Network for multi-modal MRI super-resolution and reconstruction

Multi-modal Magnetic Resonance Imaging (MRI) super-resolution (SR) and reconstruction aims to obtain a high-quality target image from corresponding sparsely sampled signals under the guidance of a reference image. However, existing techniques typically assume that the input multi-modal MR images are well aligned, which is challenging to achieve in clinical practice. This naive assumption has made their algorithms vulnerable to misalignment scenarios. Moreover, they often neglect many non-local common characteristics within and between modalities. In this work, we proposed a MisAlignment-Resistant Deep Unfolding Network (MAR-DUN) embedded in the tailored gradient descent module (GDM) and proximal mapping module (PMM) for multi-modal MRI SR and reconstruction. In the GDM, we employ an adaptive step-size sub-network (ASS-Net) to enhance the texture representation capacity of the proposed MAR-DUN. Furthermore, in the PMM, we propose a cross-modality non-local module (CNLM) featuring the inverse deformation layer (IDL). The IDL aligns features between the target and reference images by adaptively learning their spatial transformations, thus enhancing the robustness of the proposed network and allowing the CNLM to further explore the cross-modality non-local characteristics. On the other hand, the proposed CNLM aims to establish both the intra-modality and inter-modality non-local dependencies for fully exploiting the correlations between the target and reference images. Extensive experimental results show that our proposed method consistently achieves state-of-the-art reconstruction performance in alignment and misalignment scenarios, demonstrating its significant promise for real-world applications.

Swin Transformer and the Unet Architecture to Correct Motion Artifacts in Magnetic Resonance Image Reconstruction.

We present a deep learning-based method that corrects motion artifacts and thus accelerates data acquisition and reconstruction of magnetic resonance images. The novel model, the Motion Artifact Correction by Swin Network (MACS-Net), uses a Swin transformer layer as the fundamental block and the Unet architecture as the neural network backbone. We employ a hierarchical transformer with shifted windows to extract multiscale contextual features during encoding. A new dual upsampling technique is employed to enhance the spatial resolutions of feature maps in the Swin transformer-based decoder layer. A raw magnetic resonance imaging dataset is used for network training and testing; the data contain various motion artifacts with ground truth images of the same subjects. The results were compared to six state-of-the-art MRI image motion correction methods using two types of motions. When motions were brief (within 5 s), the method reduced the average normalized root mean square error (NRMSE) from 45.25% to 17.51%, increased the mean structural similarity index measure (SSIM) from 79.43% to 91.72%, and increased the peak signal-to-noise ratio (PSNR) from 18.24 to 26.57 dB. Similarly, when motions were extended from 5 to 10 s, our approach decreased the average NRMSE from 60.30% to 21.04%, improved the mean SSIM from 33.86% to 90.33%, and increased the PSNR from 15.64 to 24.99 dB. The anatomical structures of the corrected images and the motion-free brain data were similar.

Informed Adaptive Sensing.

For many inverse problems, the data on which the solution is based is acquired sequentially. We present an approach to the solution of such inverse problems where a sensor can be directed (or otherwise reconfigured on the fly) to acquire a particular measurement. An example problem is magnetic resonance image reconstruction. We use an estimate of mutual information derived from an empirical conditional distribution provided by a generative model to guide our measurement acquisition given measurements acquired so far. The conditionally generated data is a set of samples which are representative of the plausible solutions that satisfy the acquired measurements. We present experiments on toy and real world data sets. We focus on image data but we demonstrate that the method is applicable to a broader class of problems. We also show how a learned model such as a deep neural network can be leveraged to allow generalisation to unseen data. Our informed adaptive sensing method outperforms random sampling, variance based sampling, sparsity based methods, and compressed sensing.

Deep-learning-based reconstruction of T2-weighted magnetic resonance imaging of the prostate accelerated by compressed sensing provides improved image quality at half the acquisition time.

Deep-learning-based reconstruction (DLR) improves the quality of magnetic resonance (MR) images which allows faster acquisitions. The aim of this study was to compare the image quality of standard and accelerated T2 weighted turbo-spin-echo (TSE) images of the prostate reconstructed with and without DLR and to find associations between perceived image quality and calculated image characteristics. In a cohort of 47 prospectively enrolled consecutive patients referred for bi-parametric prostate magnetic resonance imaging (MRI), two T2-TSE acquisitions in the transverse plane were acquired on a 3T scanner-a standard T2-TSE sequence and a short sequence accelerated by a factor of two using compressed sensing (CS). The images were reconstructed with and without DLR in super-resolution mode. The image quality was rated in six domains. Signal-to-noise ratio (SNR), and image sharpness were measured. The mean acquisition time was 281±23 s for the standard and 140±12 s for the short acquisition (P<0.0001). DLR images had higher sharpness compared to non-DLR (P<0.001). Short and short-DLR had lower SNR than the standard and standard-DLR (P<0.001). The perceived image quality of short-DLR was rated better in all categories compared to the standard sequence (P<0.001 to P=0.004). All domains of subjective evaluation were correlated with measured image sharpness (P<0.001). T2-TSE acquisition of the prostate accelerated using CS combined with DLR reconstruction provides images with increased sharpness that have a superior quality as perceived by human readers compared to standard T2-TSE. The perceived image quality is correlated with measured image contrast.

Improved Magnetic Resonance Image Reconstruction using Compressed Sensing and Adaptive Multi Extreme Particle Swarm Optimization Algorithm

One powerful technique that can offer a thorough examination of the body's internal structure is magnetic resonance imaging (MRI). MRI's lengthy acquisition times, however, may restrict its clinical usefulness, particularly in situations where time is of the essence. Compressed sensing (CS) has emerged as a potentially useful method for cutting down on MRI acquisition times; nevertheless, the effectiveness of CS-MRI is dependent on the selection of the sparsity-promoting algorithm and sampling scheme. This research paper presents a novel method based on adaptive multi-extreme particle swarm optimization (AMEPSO) and dual tree complex wavelet transform (DTCWT) for fast image acquisition in magnetic resonance. The method uses AMEPSO in order to maximize the sampling pattern and minimize reconstruction error, while also exploiting the sparsity of MR images in the DTCWT domain to improve directional selectivity and shift invariance. MATLAB software was used for simulation of the proposed method. In comparison with the particle swarm optimized-DTCWT (PSODTCWT) and DTCWT algorithms, respectively, the results demonstrated an improvement in the peak signal-to-noise ratio of 8.92% and 15.92% and a higher structural similarity index measure of 3.69% and 7.5%. Based on these improvements, the proposed method could potentially make high-quality, real-time MRI imaging possible, which might improve detection and treatment of medical conditions and increase the throughput of MRI machines.

Effect of MR head coil geometry on deep-learning-based MR image reconstruction.

To investigate whether parallel imaging-imposed geometric coil constraints can be relaxed when using a deep learning (DL)-based image reconstruction method as opposed to a traditional non-DL method. Traditional and DL-based MR image reconstruction approaches operate in fundamentally different ways: Traditional methods solve a system of equations derived from the image data whereas DL methods use data/target pairs to learn a generalizable reconstruction model. Two sets of head coil profiles were evaluated: (1) 8-channel and (2) 32-channel geometries. A DL model was compared to conjugate gradient SENSE (CG-SENSE) and L1-wavelet compressed sensing (CS) through quantitative metrics and visual assessment as coil overlap was increased. Results were generally consistent between experiments. As coil overlap increased, there was a significant (p < 0.001) decrease in performance in most cases for all methods. The decrease was most pronounced for CG-SENSE, and the DL models significantly outperformed (p < 0.001) their non-DL counterparts in all scenarios. CS showed improved robustness to coil overlap and signal-to-noise ratio (SNR) versus CG-SENSE, but had quantitatively and visually poorer reconstructions characterized by blurriness as compared to DL. DL showed virtually no change in performance across SNR and very small changes across coil overlap. The DL image reconstruction method produced images that were robust to coil overlap and of higher quality than CG-SENSE and CS. This suggests that geometric coil design constraints can be relaxed when using DL reconstruction methods.

DIRECTION: Deep cascaded reconstruction residual-based feature modulation network for fast MRI reconstruction

Deep cascaded networks have been extensively studied and applied to accelerate Magnetic Resonance Imaging (MRI) and have shown promising results. Most existing works employ a large cascading number for the sake of superior performances. However, due to the lack of proper guidance, the reconstruction performance can easily reach a plateau and even face degradation if simply increasing the cascading number. In this paper, we aim to boost the reconstruction performance from a novel perspective by proposing a parallel architecture called DIRECTION that fully exploits the guiding value of the reconstruction residual of each subnetwork. Specifically, we introduce a novel Reconstruction Residual-Based Feature Modulation Mechanism (RRFMM) which utilizes the reconstruction residual of the previous subnetwork to guide the next subnetwork at the feature level. To achieve this, a Residual Attention Modulation Block (RAMB) is proposed to generate attention maps using multi-scale residual features to modulate the image features of the corresponding scales. Equipped with this strategy, each subnetwork within the cascaded network possesses its unique optimization objective and emphasis rather than blindly updating its parameters. To further boost the performance, we introduce the Cross-Stage Feature Reuse Connection (CSFRC) and the Reconstruction Dense Connection (RDC), which can reduce information loss and enhance representative ability. We conduct sufficient experiments and evaluate our method on the fastMRI knee dataset using multiple subsampling masks. Comprehensive experimental results show that our method can markedly boost the performance of cascaded networks and significantly outperforms other compared state-of-the-art methods quantitatively and qualitatively.

Knowledge-driven deep learning for fast MR imaging: Undersampled MR image reconstruction from supervised to un-supervised learning.

Deep learning (DL) has emerged as a leading approach in accelerating MRI. It employs deep neural networks to extract knowledge from available datasets and then applies the trained networks to reconstruct accurate images from limited measurements. Unlike natural image restoration problems, MRI involves physics-based imaging processes, unique data properties, and diverse imaging tasks. This domain knowledge needs to be integrated with data-driven approaches. Our review will introduce the significant challenges faced by such knowledge-driven DL approaches in the context of fast MRI along with several notable solutions, which include learning neural networks and addressing different imaging application scenarios. The traits and trends of these techniques have also been given which have shifted from supervised learning to semi-supervised learning, and finally, to unsupervised learning methods. In addition, MR vendors' choices of DL reconstruction have been provided along with some discussions on open questions and future directions, which are critical for the reliable imaging systems.

Reconstruction of 3D knee MRI using deep learning and compressed sensing: a validation study on healthy volunteers.

To investigate the potential of combining compressed sensing (CS) and artificial intelligence (AI), in particular deep learning (DL), for accelerating three-dimensional (3D) magnetic resonance imaging (MRI) sequences of the knee. Twenty healthy volunteers were examined using a 3-T scanner with a fat-saturated 3D proton density sequence with four different acceleration levels (10, 13, 15, and 17). All sequences were accelerated with CS and reconstructed using the conventional and a new DL-based algorithm (CS-AI). Subjective image quality was evaluated by two blinded readers using seven criteria on a 5-point-Likert-scale (overall impression, artifacts, delineation of the anterior cruciate ligament, posterior cruciate ligament, menisci, cartilage, and bone). Using mixed models, all CS-AI sequences were compared to the clinical standard (sense sequence with an acceleration factor of 2) and CS sequences with the same acceleration factor. 3D sequences reconstructed with CS-AI achieved significantly better values for subjective image quality compared to sequences reconstructed with CS with the same acceleration factor (p ≤ 0.001). The images reconstructed with CS-AI showed that tenfold acceleration may be feasible without significant loss of quality when compared to the reference sequence (p ≥ 0.999). For 3-T 3D-MRI of the knee, a DL-based algorithm allowed for additional acceleration of acquisition times compared to the conventional approach. This study, however, is limited by its small sample size and inclusion of only healthy volunteers, indicating the need for further research with a more diverse and larger sample. DRKS00024156. Using a DL-based algorithm, 54% faster image acquisition (178s versus 384s) for 3D-sequences may be possible for 3-T MRI of the knee. • Combination of compressed sensing and DL improved image quality and allows for significant acceleration of 3D knee MRI. •DL-based algorithm achieved better subjective image quality than conventional compressed sensing. •For 3D knee MRI at 3 T, 54% faster image acquisition may be possible.

A noise robust image reconstruction using slice aware cycle interpolator network for parallel imaging in MRI.

Reducing Magnetic resonance imaging (MRI) scan time has been an important issue for clinical applications. In order to reduce MRI scan time, imaging acceleration was made possible by undersampling k-space data. This is achieved by leveraging additional spatial information from multiple, independent receiver coils, thereby reducing the number of sampled k-spacelines. The aim of this study is to develop a deep-learning method for parallel imaging with a reduced number of auto-calibration signals (ACS) lines in noisyenvironments. A cycle interpolator network is developed for robust reconstruction of parallel MRI with a small number of ACS lines in noisy environments. The network estimates missing (unsampled) lines of each coil data, and these estimated missing lines are then utilized to re-estimate the sampled k-space lines. In addition, a slice aware reconstruction technique is developed for noise-robust reconstruction while reducing the number of ACS lines. We conducted an evaluation study using retrospectively subsampled data obtained from three healthy volunteers at 3T MRI, involving three different slice thicknesses (1.5, 3.0, and 4.5 mm) and three different image contrasts (T1w, T2w, and FLAIR). Despite the challenges posed by substantial noise in cases with a limited number of ACS lines and thinner slices, the slice aware cycle interpolator network reconstructs the enhanced parallel images. It outperforms RAKI, effectively eliminating aliasing artifacts. Moreover, the proposed network outperforms GRAPPA and demonstrates the ability to successfully reconstruct brain images even under severe noisyconditions. The slice aware cycle interpolator network has the potential to improve reconstruction accuracy for a reduced number of ACS lines in noisyenvironments.

The "hidden noise" problem in MR image reconstruction.

The performance of modern image reconstruction methods is commonly judged using quantitative error metrics like root mean squared-error and the structural similarity index, which are calculated by comparing reconstructed images against fully sampled reference data. In practice, the reference data will contain noise and is not a true gold standard. In this work, we demonstrate that the "hidden noise" present in reference data can substantially confound standard approaches for ranking different image reconstruction results. Using both experimental and simulated k-space data and several different image reconstruction techniques, we examined whether there was correlation between performance metrics obtained with typical noisy reference data versus those obtained with higher-quality reference data. For conventional performance metrics, the reconstructions that matched best with the higher-quality reference data were substantially different from the reconstructions that matched best with typical noisy reference data. This leads to suboptimal reconstruction results if the performance with respect to noisy reference data is used to select which reconstruction methods/parameters to employ. These issues were reduced when employing alternative error metrics that better account for noise. Reference data containing hidden noise can substantially mislead the ranking of image reconstruction methods when using conventional error metrics, but this issue can be mitigated with alternative error metrics.

IMJENSE: Scan-Specific Implicit Representation for Joint Coil Sensitivity and Image Estimation in Parallel MRI.

Parallel imaging is a commonly used technique to accelerate magnetic resonance imaging (MRI) data acquisition. Mathematically, parallel MRI reconstruction can be formulated as an inverse problem relating the sparsely sampled k-space measurements to the desired MRI image. Despite the success of many existing reconstruction algorithms, it remains a challenge to reliably reconstruct a high-quality image from highly reduced k-space measurements. Recently, implicit neural representation has emerged as a powerful paradigm to exploit the internal information and the physics of partially acquired data to generate the desired object. In this study, we introduced IMJENSE, a scan-specific implicit neural representation-based method for improving parallel MRI reconstruction. Specifically, the underlying MRI image and coil sensitivities were modeled as continuous functions of spatial coordinates, parameterized by neural networks and polynomials, respectively. The weights in the networks and coefficients in the polynomials were simultaneously learned directly from sparsely acquired k-space measurements, without fully sampled ground truth data for training. Benefiting from the powerful continuous representation and joint estimation of the MRI image and coil sensitivities, IMJENSE outperforms conventional image or k-space domain reconstruction algorithms. With extremely limited calibration data, IMJENSE is more stable than supervised calibrationless and calibration-based deep-learning methods. Results show that IMJENSE robustly reconstructs the images acquired at 5× and 6× accelerations with only 4 or 8 calibration lines in 2D Cartesian acquisitions, corresponding to 22.0% and 19.5% undersampling rates. The high-quality results and scanning specificity make the proposed method hold the potential for further accelerating the data acquisition of parallel MRI.

A Faithful Deep Sensitivity Estimation for Accelerated Magnetic Resonance Imaging.

Magnetic resonance imaging (MRI) is an essential diagnostic tool that suffers from prolonged scan time. To alleviate this limitation, advanced fast MRI technology attracts extensive research interests. Recent deep learning has shown its great potential in improving image quality and reconstruction speed. Faithful coil sensitivity estimation is vital for MRI reconstruction. However, most deep learning methods still rely on pre-estimated sensitivity maps and ignore their inaccuracy, resulting in the significant quality degradation of reconstructed images. In this work, we propose a Joint Deep Sensitivity estimation and Image reconstruction network, called JDSI. During the image artifacts removal, it gradually provides more faithful sensitivity maps with high-frequency information, leading to improved image reconstructions. To understand the behavior of the network, the mutual promotion of sensitivity estimation and image reconstruction is revealed through the visualization of network intermediate results. Results on in vivo datasets and radiologist reader study demonstrate that, for both calibration-based and calibrationless reconstruction, the proposed JDSI achieves the state-of-the-art performance visually and quantitatively, especially when the acceleration factor is high. Additionally, JDSI owns nice robustness to patients and autocalibration signals.

DLGAN: Undersampled MRI reconstruction using Deep Learning based Generative Adversarial Network

Magnetic Resonance Imaging (MRI) is a crucial tool for quantitative image analysis and clinical diagnosis, providing detailed anatomical images to assist in the detection of various abnormalities. However, the widespread use of MRI is hindered by the challenges associated with long sampling periods and low-resolution image processing, prompting the development of various traditional methods to address these limitations. In recent times, advanced Deep Learning (DL) techniques have been applied to tackle the inverse problem of reconstructing MRI images from undersampled data. These DL models have demonstrated substantial improvements in terms of image reconstruction performance, cost-effectiveness, and reduced acquisition time, offering significant potential for further enhancements in this domain. This study introduces a novel DLGAN (Deep Learning Generative Adversarial Network) model comprising two sub-GAN modules tailored for specific datasets. Each module incorporates DLGAN (Generator Block, GB) and DLGAN (Discriminator Block, DB) blocks, strategically designed to regenerate MR images from K Space data. These blocks effectively leverage information from both the ground truth and KSpace characteristics, resulting in enhanced image reconstruction performance while also reducing complexity and improving overall efficiency. The DLGAN model effectively addresses common issues such as artefact removal and vanishing-gradient problems through the extraction of hierarchical features. To evaluate the model’s effectiveness, comprehensive experiments were conducted, utilizing metrics such as Peak Signal-to-Noise Ratio (PSNR) and Structural Similarity Index (SSIM). The experimental findings demonstrate that the proposed DLGAN model outperforms the most recent designs in MRI image reconstruction, showcasing its potential for significant advancements in clinical diagnosis and quantitative image analysis.

DiffGAN: An adversarial diffusion model with local transformer for MRI reconstruction

Magnetic resonance imaging (MRI) is non-invasive and crucial for clinical diagnosis, but it has long acquisition time and aliasing artifacts. Accelerated imaging techniques can effectively reduce the scanning time of MRI, thereby decreasing the anxiety and discomfort of patients. Vision Transformer (ViT) based methods have greatly improved MRI image reconstruction, but their computational complexity and memory requirements for the self-attention mechanism grow quadratically with image resolution, which limits their use for high resolution images. In addition, the current generative adversarial networks in MRI reconstruction are difficult to train stably. To address these problems, we propose a Local Vision Transformer (LVT) based adversarial Diffusion model (Diff-GAN) for accelerating MRI reconstruction. We employ a generative adversarial network (GAN) as the reverse diffusion model to enable large diffusion steps. In the forward diffusion module, we use a diffusion process to generate Gaussian mixture distribution noise, which mitigates the gradient vanishing issue in GAN training. This network leverages the LVT module with the local self-attention, which can capture high-quality local features and detailed information. We evaluate our method on four datasets: IXI, MICCAI 2013, MRNet and FastMRI, and demonstrate that Diff-GAN can outperform several state-of-the-art GAN-based methods for MRI reconstruction.

Improved Complex Convolutional Neural Network Based on SPIRiT and Dense Connection for Parallel MRI Reconstruction

To accelerate the data acquisition speed of magnetic resonance imaging (MRI) and improve the reconstructed MR images’ quality, we propose a parallel MRI reconstruction model (SPIRiT-Net), which combines the iterative self-consistent parallel imaging reconstruction model (SPIRiT) with the cascaded complex convolutional neural networks (CCNNs). More specifically, this model adopts the SPIRiT model for reconstruction in the k-space domain and the cascaded CCNNs with dense connection for reconstruction in the image domain. Meanwhile, this model introduces the data consistency layers for better reconstruction in both the image domain and the k-space domain. The experimental results on two clinical knee datasets as well as the fastMRI brain dataset under different undersampling patterns show that the SPIRiT-Net model achieves better reconstruction performance in terms of visual effect, peak signal-to-noise ratio, and structural similarity over SPIRiT, Deepcomplex, and DONet. It will be beneficial to the diagnosis of clinical medicine.