Reactions Of Photosynthesis Research Articles

Proton Gradient Regulation 5 is required to avoid photosynthetic oscillations during light transitions.

The production of ATP and NADPH by the light reactions of photosynthesis and their consumption by the Calvin-Benson-Bassham (CBB) cycle and other downstream metabolic reactions requires careful regulation. Environmental shifts perturb this balance, leading to photo-oxidative stress and losses in CO2 assimilation. Imbalances in the production and consumption of ATP and NADPH manifest themselves as transient instability in the chlorophyll fluorescence, P700, electrochromic shift, and CO2 uptake signals recorded on leaves. These oscillations can be induced in wild-type plants by sudden shifts in CO2 concentration or light intensity; however, mutants exhibiting increased oscillatory behaviour have yet to be reported. This has precluded an understanding of the regulatory mechanisms employed by plants to suppress oscillations. Here we show that the Arabidopsis pgr5 mutant, which is deficient in Proton Gradient Regulation 5 (PGR5)-dependent cyclic electron transfer (CET), exhibits increased oscillatory behaviour. In contrast, mutants lacking the NADH-dehydrogenase-like-dependent CET are largely unaffected. The absence of oscillations in the hope2 mutant which, like pgr5, lacks photosynthetic control and exhibits high ATP synthase conductivity, ruled out loss of these photoprotective mechanisms as causes. Instead, we observed slower formation of the proton motive force and, by inference, ATP synthesis in pgr5 following environmental perturbation, leading to the transient reduction of the electron transfer chain and photosynthetic oscillations. PGR5-dependent CET therefore plays a major role in damping the effect of environmental perturbations on photosynthesis to avoid losses in CO2 fixation.

Plasmodesmal connectivity in C4 Gynandropsis gynandra is induced by light and dependent on photosynthesis.

In leaves of C4 plants, the reactions of photosynthesis become restricted between two compartments. Typically, this allows accumulation of C4 acids in mesophyll (M) cells and subsequent decarboxylation in the bundle sheath (BS). In C4 grasses, proliferation of plasmodesmata between these cell types is thought to increase cell-to-cell connectivity to allow efficient metabolite movement. However, it is not known whether C4 dicotyledons also show this enhanced plasmodesmal connectivity and so whether this is a general requirement for C4 photosynthesis is not clear. How M and BS cells in C4 leaves become highly connected is also not known. We investigated these questions using 3D- and 2D-electron microscopy on the C4 dicotyledon Gynandropsis gynandra as well as phylogenetically close C3 relatives. The M-BS interface of C4 G. gynandra showed higher plasmodesmal frequency compared with closely related C3 species. Formation of these plasmodesmata was induced by light. Pharmacological agents that perturbed photosynthesis reduced the number of plasmodesmata, but this inhibitory effect could be reversed by the provision of exogenous sucrose. We conclude that enhanced formation of plasmodesmata between M and BS cells is wired to the induction of photosynthesis in C4 G. gynandra.

Expansion microscopy resolves the thylakoid structure of spinach.

The light-harvesting reactions of photosynthesis take place on the thylakoid membrane inside chloroplasts. The thylakoid membrane is folded into appressed membranes, the grana, and nonappressed membranes that interconnect the grana, the stroma lamellae. This folding is essential for the correct functioning of photosynthesis. Electron microscopy and atomic force microscopy are commonly used to study the thylakoid membrane, but these techniques have limitations in visualizing a complete chloroplast and its organization. To overcome this limitation, we applied expansion microscopy (ExM) on isolated chloroplasts. ExM is a technique that involves physically expanding a sample in a swellable hydrogel to enhance the spatial resolution of fluorescence microscopy. Using all-protein staining, we visualized the 3D structure of spinach (Spinacia oleracea) thylakoids in detail. We were able to resolve stroma lamellae that were 60 nm apart and observe their helical wrapping around the grana. Furthermore, we accurately measured the dimensions of grana from top views of chloroplasts, which allow for precise determination of the granum diameter. Our results demonstrate that ExM is a fast and reliable technique for studying thylakoid organization in great detail.

Contribution Factors of the First Kind Calculated for the Marcus Electron-Transfer Rate and Their Applications.

In this study, we applied the concept of the "contribution factor of the first kind (CFFK)" to the original electron-transfer (ET) rate theory proposed by Marcus. Mathematical derivations provided simple and convenient formulas for estimating the relative contributions of ten physical and chemical parameters involved in the Marcus ET rate formula: (1) the maximum strength of the electronic coupling energy between two molecules, (2) the exponential decay rate of the electronic coupling energy versus the distance between both molecules, (3) the distance between both molecules, (4) the equilibrium distance between both molecules, (5) the Gibbs free energy, (6) reorganization free energy in the prefactor of the Marcus ET rate equation, (7) reorganization free energy in the denominator of the exponential term, (8) reorganization free energy in the argument of the exponential term, (9) Boltzmann constant times absolute temperature in the prefactor of the rate equation, and (10) Boltzmann constant times absolute temperature in the denominator of the exponential term. We applied our theories to (i) ET reactions at bacterial photosynthesis reaction centers, PSI and PSII, and soluble ferredoxins (Fd); (ii) intraprotein ET reactions for designed azurin mutants; and (iii) ET reactions in flavodoxin (Fld). The formulas and calculations suggest that the theory behind the CFFK is useful for quantitatively identifying major and minor physical and chemical factors and corresponding trade-offs, all of which affect the magnitude of the Marcus ET rate.

Elevated CO2 reduced antimony toxicity in wheat plants by improving photosynthesis, soil microbial content, minerals, and redox status.

Antimony (Sb), a common rare heavy metal, is naturally present in soils at low concentrations. However, it is increasingly used in industrial applications, which in turn, leads to an increased release into the environment, exerting a detrimental impact on plant growth. Thus, it is important to study Sb effects on plants under the current and future CO2 (eCO2). To this end, high Sb concentrations (1500 mg/kg soil) effects under ambient (420 ppm) and eCO2 (710 ppm) on wheat growth, physiology (photosynthesis reactions) and biochemistry (minerals contents, redox state), were studied and soil microbial were evaluated. Our results showed that Sb uptake significantly decreased wheat growth by 42%. This reduction could be explained by the inhibition in photosynthesis rate, Rubisco activity, and photosynthetic pigments (Cha and Chb), by 35%, 44%, and 51%, respectively. Sb significantly reduced total bacterial and fungal count and increased phenolic and organic acids levels in the soil to decrease Sb uptake. Moreover, it induced oxidative markers, as indicated by the increased levels of H2O2 and MDA (1.96 and 2.8-fold compared to the control condition, respectively). To reduce this damage, antioxidant capacity (TAC), CAT, POX, and SOD enzymes activity were increased by 1.61, 2.2, 2.87, and 1.86-fold, respectively. In contrast, eCO2 mitigated growth inhibition in Sb-treated wheat. eCO2 and Sb coapplication mitigated the Sb harmful effect on growth by reducing Sb uptake and improving photosynthesis and Rubisco enzyme activity by 0.58, 1.57, and 1.4-fold compared to the corresponding Sb treatments, respectively. To reduce Sb uptake and improve mineral availability for plants, a high accumulation of phenolics level and organic acids in the soil was observed. eCO2 reduces Sb-induced oxidative damage by improving redox status. In conclusion, our study has provided valuable insights into the physiological and biochemical bases underlie the Sb-stress mitigating of eCO2 conditions. Furthermore, this is important step to define strategies to prevent its adverse effects of Sb on plants in the future.

Evaluation of the Primary Photosynthesis Reactions in Microalgae Single Cell by the Microfluorimetric Method

Evaluation of the Primary Photosynthesis Reactions in Microalgae Single Cell by the Microfluorimetric Method

Alterations in Carbohydrate Metabolism and Modulation of Thermo-Tolerance in Tomato under Heat Stress

Heat stress affects the source and sink activities, growth and development, economic yield and harvest index of plants negatively. Heat stress has got severe effects on the biochemical reactions of photosynthesis which included irreversible damages of RuBisCO, oxygen evolving complexes, PSII reaction centres and disruptions of chloroplast ultrastructure and thylakoid membrane. Sugars are products of photosynthesis in plants which serve as substrates for energy metabolism and are required for synthesis of cellulose and starch polysaccharides. Glucose, fructose, sucrose, mannose, trehalose, maltose etc. are the sugars present in plants. Abiotic stresses like temperature, drought, flood and salinity causes crucial differences in the carbohydrate metabolism. Sugars acts as primary signaling molecules and regulate signals that control the expression of many genes and enzymes involved in carbohydrate metabolism. Decrease in crop productivity under heat stress is chiefly associated with alterations in carbohydrate accumulation and resulting defects in assimilation partitioning from source to sink. It is essential to understand the responses and acclimatization processes to extreme temperatures in plants, such that the mechanisms underlying can be used for developing heat-tolerant varieties. Sugars such as glucose, sucrose, fructan, raffinose and trehalose not only acts structural component and metabolic resources also regulate genes associated with heat stress tolerance and reduce the chances of crop loss. The external application of compounds like osmoregulators, phytohormones, signaling molecules, etc., have exhibited positive responses in stress tolerance due to its growth promoting and antioxidant activities.

Photosynthetic Efficiency of Marchantia polymorpha L. in Response to Copper, Iron, and Zinc.

Metal micronutrients are essential for plant nutrition, but their toxicity threshold is low. In-depth studies on the response of light-dependent reactions of photosynthesis to metal micronutrients are needed, and the analysis of chlorophyll a fluorescence transients is a suitable technique. The liverwort Marchantia polymorpha L., a model organism also used in biomonitoring, allowed us to accurately study the effects of metal micronutrients in vivo, particularly the early responses. Gametophytes were treated with copper (Cu), iron (Fe) or zinc (Zn) for up to 120 h. Copper showed the strongest effects, negatively affecting almost the entire light phase of photosynthesis. Iron was detrimental to the flux of energy around photosystem II (PSII), while the acceptor side of PSI was unaltered. The impact of Fe was milder than that of Cu and in both cases the structures of the photosynthetic apparatus that resisted the treatments were still able to operate efficiently. The susceptibility of M. polymorpha to Zn was low: although the metal affected a large part of the electron transport chain, its effects were modest and short-lived. Our results may provide a contribution towards achieving a more comprehensive understanding of response mechanisms to metals and their evolution in plants, and may be useful for supporting the development of biomonitoring techniques.

A Review of Environmental Impact of Azo Dyes

Green plants are one of nature’s factories, fixing inorganic chemicals into organic compounds through photosynthesis and other reactions. Microbes are one of the nature’s most effective tools, converting organic materials—dead plants and animals—into inorganic forms through decomposition and mineralization. Together, green plants and microbes are responsible for maintaining a balance between the organic and inorganic worlds, but pollutants, such as synthetic dyes, can upset this balance. Compared with synthetic dyes, natural dyes are safer and more environmentally friendly, but they are also costlier and more difficult to apply, so they are not viable in most commercial applications. Azo dyes are low cost and have high intensity and color fastness, so they are the most frequently used class of synthetic dyes. The main threats related to the dumping of untreated azo dyes into the environment come from their primary byproducts––aromatic amines––which result from the cleavage of the central azo bonds, and which have been classified as significant carcinogenic compounds, representing a great risk to humans as well as the environment. To address this threat, the degradation of synthetic azo dyes is showing promise as an approach to treating azo-dye wastewater. In this review, the classification of azo dyes and their color mechanism is presented first, and then an overview of the research on their environmental impacts is provided, including their effects on biochemical and chemical oxygen demand, water ecosystems, plants, and crops. Finally, the legislation and guidelines on azo dyes and their byproducts are discussed. Keywords: azo dyes; climate change; biochemical oxygen demand; chemical oxygen demand; aromatic amines

Ecotoxicological assessment of copper and zinc in a common aquatic plant Ceratophyllum demersum: Physiological effects and biomarker responses

Utilizing and discharging chemical products containing trace metals lead to widespread contamination in the aquatic environment. Although copper (Cu) and zinc (Zn) are essential plant micronutrients, excessive concentrations may induce stress and mortality. This study investigated the physiological responses of a common aquatic plant, Ceratophyllum demersum, exposed to Cu (0, 2, 5, 10, and 50 μM) or Zn (0, 50, 100, 500, and 1000 μM) for 3 days. Both Cu and Zn were accumulated in plant tissues. Cu exposure led to severe phytotoxicity effects, manifested as a rapid decrease in photosynthetic efficiency (Fv/Fm and ՓPSII), a significant reduction in pigments and an increase in oxidative stress markers. In contrast, minor effects were observed in Zn-treated plants. In addition, Cu exposure suppressed the expression of D1, rubisco large subunit, and alpha-tubulin proteins but did not affect the PSI-B core subunit of PSI. Our study suggested that Cu is a potent phytotoxin by disturbing the principal reactions of photosynthesis and inducing oxidative stress and protein degradation. The overall health status of C. demersum was assessed by adopting the biomarker response index (BRI) approach. The effects of Cu were categorized as moderate in 2 μM and severe in 5, 10, and 50 μM whereas the effects of Zn were categorized as slight in 50 μM, negligible in 100 μM and major in 500 and 1000 μM. BRI effectively substantiates data interpretation of complex plant responses to trace metals and should be further adapted into biomonitoring suites in aquatic systems.

Regulation of photosynthetic and hemolytic activity of Phaeocystis globosa under different light spectra.

Phaeocystis globosa frequently proliferates in eutrophic waters and forms ichthyotoxic algal blooms that cause massive fish mortalities in marine ecosystems. One of the ichthyotoxic metabolites was identified as the glycolipid-like hemolytic toxin, reported to be initiated under light conditions. However, the association between hemolytic activity (HA) and photosynthesis of P. globosa remained unclear. Light spectra (blue, red, green, and white) and 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU) were selected as the stressors to stimulate the hemolytic response of P. globosa in relation to the light and dark photosynthesis reaction. Hemolytic activity in P. globosa was sensitive to the light spectrum as it decreased from 93% to nearly undetectable (1.6%) within 10 min of transfer from red (630 nm) to green light (520 nm). This indicates that the vertical transformation of P. globosa from deep to surface waters (dominated by green light and all light spectra, respectively) may drive the hemolytic response in coastal waters. However, regulation of photosynthetic electron transfer in the light reaction of P. globosa was excluded by the evidence of inconsistent response of HA to photosynthetic activity. The biosynthesis of HA may interfere with the pathway of photopigments diadinoxanthin or fucoxanthin, and the metabolism of three- and five-carbon sugars (GAP and Ru5P, respectively), which ultimately lead to changes in the alga's hemolytic carbohydrate metabolism.

Hydrilla Photosynthesis Process As Biochemical Reducing Agent

Photosynthesis is the process of synthesizing inorganic materials (CO2 and H2O) in pigmented plants with the help of solar energy. CO2 and H2O are substrates in photosynthesis reactions and with the help of sunlight and photosynthetic pigments consisting of chlorophyll and other pigments will produce iron and release oxygen. Basically, sequential reactions can be divided into two main parts, namely the light reaction (receives light) and the dark reaction (does not require light but requires carbon dioxide). Photosynthesis is influenced by many factors, both internal and external factors. Internal factors include the age of the leaves, the state of the stomata, and the type of plant. External factors include CO2 and O2, water availability, humidity and air temperature, light conditions. In the light reaction stage that occurs in the grana, light energy is shown to be energy consisting of NADPH2 and ATP. Then in the dark reaction stage, which is carried out in the stroma, NADPH2 and ATP are used as biochemical reducing agents to convert carbon dioxide into transport. Growing water releases oxygen into the air. The released oxygen will dissolve in the air and form dissolved oxygen. The photosynthesis practicum was carried out at the Microbiology and Molecular Biotechnology Laboratory, FPIK, Padjadjaran University. Performed on hydrilla plants.

Hormonal Balance, Photosynthesis, and Redox Reactions in the Leaves of Caragana korshinskii Kom. under Water Deficit.

To evaluate the physiological responses of Korshinsk peashrub (Caragana korshinskii Kom.) to water deficit, photosynthetic gas exchange, chlorophyll fluorescence, and the levels of superoxide anion (O2•-), hydrogen peroxide (H2O2), malondialdehyde (MDA), antioxidant enzymes, and endogenous hormones in its leaves were investigated under different irrigation strategies during the entire growth period. The results showed that leaf growth-promoting hormones were maintained at a higher level during the stages of leaf expansion and vigorous growth, and zeatin riboside (ZR) and gibberellic acid (GA) gradually decreased with an increase in water deficit. At the leaf-shedding stage, the concentration of abscisic acid (ABA) dramatically increased, and the ratio of ABA to growth-promoting hormones increased to a high level, which indicated that the rate of leaf senescence and shedding was accelerated. At the stages of leaf expansion and vigorous growth, the actual efficiency of photosystem II (PSII) (ΦPSii) was downregulated with an increment in non-photochemical quenching (NPQ) under moderate water deficit. Excess excitation energy was dissipated, and the maximal efficiency of PSII (Fv/Fm) was maintained. However, with progressive water stress, the photo-protective mechanism was inadequate to avoid photo-damage; Fv/Fm was decreased and photosynthesis was subject to non-stomatal inhibition under severe water deficit. At the leaf-shedding stage, non-stomatal factors became the major factors in limiting photosynthesis under moderate and severe water deficits. In addition, the generation of O2•- and H2O2 in the leaves of Caragana was accelerated under moderate and severe water deficits, which caused an enhancement of antioxidant enzyme activities to maintain the oxidation-reduction balance. However, when the protective enzymes were insufficient in eliminating excessive reactive oxygen species (ROS), the activity of catalase (CAT) was reduced at the leaf-shedding stage. Taken all together, Caragana has strong drought resistance at the leaf expansion and vigorous growth stages, but weak drought resistance at the leaf-shedding stage.

Dual Cocatalysts Synergistically Promote Perylene Diimide Polymer Charge Transfer for Enhanced Photocatalytic Water Oxidation

Water oxidation is a critical reaction in artificial photosynthesis which is limited by a high reaction energy barrier and often requires matching cocatalysts. Dual cocatalysts Co3O4 and Pt are combined with a perylene diimide (PDI) polymer, accomplishing a photocatalytic O2 production rate of 24.4 mmol g–1 h–1 under visible light irradiation, which is a 5.4-fold enhancement compared with PDI alone. Moreover, the apparent quantum yield of the O2 evolution reaction reaches 6.9% at 420 nm and remains 1.2% at 590 nm. The dual cocatalysts-constructed interfacial electric fields provide an anisotropic driving force for photogenerated holes to Co3O4 and electrons to Pt, synergistically improving the spatial charge separation efficiency for water oxidation. Co3O4 molecules serve as active sites for the water oxidation reaction to improve the utilization of photogenerated holes on the surface. This work provides a valuable demonstration of the interaction process and mechanism of cocatalysts, guiding the selection of cocatalysts for high-efficiency solar energy conversion.

Lighting the light reactions of photosynthesis by means of redox-responsive genetically encoded biosensors for photosynthetic intermediates.

Oxygenic photosynthesis involves light and dark phases. In the light phase, photosynthetic electron transport provides reducing power and energy to support the carbon assimilation process. It also contributes signals to defensive, repair, and metabolic pathways critical for plant growth and survival. The redox state of components of the photosynthetic machinery and associated routes determines the extent and direction of plant responses to environmental and developmental stimuli, and therefore, their space- and time-resolved detection in planta becomes critical to understand and engineer plant metabolism. Until recently, studies in living systems have been hampered by the inadequacy of disruptive analytical methods. Genetically encoded indicators based on fluorescent proteins provide new opportunities to illuminate these important issues. We summarize here information about available biosensors designed to monitor the levels and redox state of various components of the light reactions, including NADP(H), glutathione, thioredoxin, and reactive oxygen species. Comparatively few probes have been used in plants, and their application to chloroplasts poses still additional challenges. We discuss advantages and limitations of biosensors based on different principles and propose rationales for the design of novel probes to estimate the NADP(H) and ferredoxin/flavodoxin redox poise, as examples of the exciting questions that could be addressed by further development of these tools. Genetically encoded fluorescent biosensors are remarkable tools to monitor the levels and/or redox state of components of the photosynthetic light reactions and accessory pathways. Reducing equivalents generated at the photosynthetic electron transport chain in the form of NADPH and reduced ferredoxin (FD) are used in central metabolism, regulation, and detoxification of reactive oxygen species (ROS). Redox components of these pathways whose levels and/or redox status have been imaged in plants using biosensors are highlighted in green (NADPH, glutathione, H2O2, thioredoxins). Analytes with available biosensors not tried in plants are shown in pink (NADP+). Finally, redox shuttles with no existing biosensors are circled in light blue. APX, ASC peroxidase; ASC, ascorbate; DHA, dehydroascorbate; DHAR, DHA reductase; FNR, FD-NADP+ reductase; FTR, FD-TRX reductase; GPX, glutathione peroxidase; GR, glutathione reductase; GSH, reduced glutathione; GSSG, oxidized glutathione; MDA, monodehydroascorbate; MDAR, MDA reductase; NTRC, NADPH-TRX reductase C; OAA, oxaloacetate; PRX, peroxiredoxin; PSI, photosystem I; PSII: photosystem II; SOD, superoxide dismutase; TRX, thioredoxin.

Biocontrol Impacts on Wheat Physiology and Fusarium Head Blight Outcomes Are Bacterial Endophyte Strain and Cultivar Specific

Fusarium head blight (FHB) is an economically important disease of small grains globally and is primarily caused by Fusarium graminearum in North America. Recently, microbial biocontrols have risen in importance as sustainable agents of disease control. However, the path to implementation of microbial biocontrols in agriculture will require an understanding of how microbiota both affect plant performance overall and vary with inherent host disease resistance. Using a full-factorial, controlled greenhouse experiment, we tested how seven bacterial endophyte seed soak treatments affected both plant physiology prior to pathogen infection and FHB disease progression in Triticum aestivum (wheat). Bacterial endophyte treatments strongly affected the light-dependent reactions of photosynthesis, with changes in plant traits regulating light energy allocation and the build-up of electrochemical energy storage across the thylakoid membrane. Physiological responses were contingent on host variety. The direct effects of bacterial endophytes on wheat response to infection were weak and dependent on the inherent disease resistance of the host variety. However, disease outcomes were indirectly mediated by bacterial impacts on plant traits, with proton motive force traits emerging as common predictors of disease response across both host varieties and other traits indicating potential trade-offs in host response to bacterial inoculants and F. graminearum infection. Our results provide an alternate mechanism for microbial biocontrol efficacy other than direct antagonism with the pathogen inside the host. Furthermore, the chlorophyll-fluorescence and absorbance-based markers assessed here may have translational potential as a phenotyping tool for FHB susceptibility in wheat and other small grains.

Adapting from Low to High: An Update to CO2-Concentrating Mechanisms of Cyanobacteria and Microalgae.

The intracellular accumulation of inorganic carbon (Ci) by microalgae and cyanobacteria under ambient atmospheric CO2 levels was first documented in the 80s of the 20th Century. Hence, a third variety of the CO2-concentrating mechanism (CCM), acting in aquatic photoautotrophs with the C3 photosynthetic pathway, was revealed in addition to the then-known schemes of CCM, functioning in CAM and C4 higher plants. Despite the low affinity of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) of microalgae and cyanobacteria for the CO2 substrate and low CO2/O2 specificity, CCM allows them to perform efficient CO2 fixation in the reductive pentose phosphate (RPP) cycle. CCM is based on the coordinated operation of strategically located carbonic anhydrases and CO2/HCO3- uptake systems. This cooperation enables the intracellular accumulation of HCO3-, which is then employed to generate a high concentration of CO2 molecules in the vicinity of Rubisco's active centers compensating up for the shortcomings of enzyme features. CCM functions as an add-on to the RPP cycle while also acting as an important regulatory link in the interaction of dark and light reactions of photosynthesis. This review summarizes recent advances in the study of CCM molecular and cellular organization in microalgae and cyanobacteria, as well as the fundamental principles of its functioning and regulation.

From remotely sensed solar-induced chlorophyll fluorescence to ecosystem structure, function, and service: Part I-Harnessing theory.

Solar-induced chlorophyll fluorescence (SIF) is a remotely sensed optical signal emitted during the light reactions of photosynthesis. The past two decades have witnessed an explosion in availability of SIF data at increasingly higher spatial and temporal resolutions, sparking applications in diverse research sectors (e.g., ecology, agriculture, hydrology, climate, and socioeconomics). These applications must deal with complexities caused by tremendous variations in scale and the impacts of interacting and superimposing plant physiology and three-dimensional vegetation structure on the emission and scattering of SIF. At present, these complexities have not been overcome. To advance future research, the two companion reviews aim to (1) develop an analytical framework for inferring terrestrial vegetation structures and function that are tied to SIF emission, (2) synthesize progress and identify challenges in SIF research via the lens of multi-sector applications, and (3) map out actionable solutions to tackle these challenges and offer our vision for research priorities over the next 5-10 years based on the proposed analytical framework. This paper is the first of the two companion reviews, and theory oriented. It introduces a theoretically rigorous yet practically applicable analytical framework. Guided by this framework, we offer theoretical perspectives on three overarching questions: (1) The forward (mechanism) question-How are the dynamics of SIF affected by terrestrial ecosystem structure and function? (2) The inference question: What aspects of terrestrial ecosystem structure, function, and service can be reliably inferred from remotely sensed SIF and how? (3) The innovation question: What innovations are needed to realize the full potential of SIF remote sensing for real-world applications under climate change? The analytical framework elucidates that process complexity must be appreciated in inferring ecosystem structure and function from the observed SIF; this framework can serve as a diagnosis and inference tool for versatile applications across diverse spatial and temporal scales.

Two cyanobacterial response regulators with diguanylate cyclase activity, Rre2 and Rre8, participate in biofilm formation.

Phototrophic bacteria face diurnal variations of environmental conditions such as light and osmolarity that affect their carbon metabolism and ability to generate organic compounds. The model cyanobacterium, Synechocystis sp. PCC 6803 forms a biofilm when it encounters extreme conditions like high salt stress, but the molecular mechanisms involved in perception of environmental changes that lead to biofilm formation are unknown. Here, we studied two two-component regulatory systems (TCSs) that contain diguanylate cyclases (DGCs), which produce the second messenger c-di-GMP, as potential components of the biofilm-inducing signaling pathway in Synechocystis. Analysis of single mutants provided evidence for involvement of the response regulators, Rre2 and Rre8 in biofilm formation. A bacterial two-hybrid assay showed that Rre2 and Rre8 each formed a TCS with a specific histidine kinase, Hik12 and Hik14, respectively. The in vitro assay showed that Rre2 had DGC activity regardless of its de/phosphorylation status, whereas Rre8 required phosphorylation for DGC activity. Hik14-Rre8 likely functioned as an inducible sensing system in response to environmental change. Biofilm assays with Synechocystis mutants suggested that pairs of hik12-rre2 and hik14-rre8 responded to high salinity-induced biofilm formation. Inactivation of hik12-rre2 and hik14-rre8 did not affect the performance of the light reactions of photosynthesis. These data suggest that Hik12-Rre2 and Hik14-Rre8 participate in biofilm formation in Synechocystis by regulating c-di-GMP production via the DGC activity of Rre2 and Rre8.

Survivability of the lichen Xanthoria parietina in simulated Martian environmental conditions

Xanthoria parietina (L.) Th. Fr. is a widely spread foliose lichen showing high tolerance against UV-radiation thanks to parietin, a secondary lichen substance. We exposed samples of X. parietina under simulated Martian conditions for 30 days to explore its survivability. The lichen’s vitality was monitored via chlorophyll a fluorescence that gives an indication for active light reaction of photosynthesis, performing in situ and after-treatment analyses. Raman spectroscopy and TEM were used to evaluate carotenoid preservation and possible variations in the photobiont’s ultrastructure respectively. Significant differences in the photo-efficiency between UV irradiated samples and dark-kept samples were observed. Fluorescence values correlated with temperature and humidity day-night cycles. The photo-efficiency recovery showed that UV irradiation caused significant effects on the photosynthetic light reaction. Raman spectroscopy showed that the carotenoid signal from UV exposed samples decreased significantly after the exposure. TEM observations confirmed that UV exposed samples were the most affected by the treatment, showing chloroplastidial disorganization in photobionts’ cells. Overall, X. parietina was able to survive the simulated Mars conditions, and for this reason it may be considered as a candidate for space long-term space exposure and evaluations of the parietin photodegradability.