Oranges and eucalyptus trees are abundant sources of waste and pruning, generating secondary streams that can be converted into valuable products. Both species are broadly cultivated in Mexico. Essential oils from orange peels and eucalyptus leaves possess antimicrobial and antioxidant properties, making them useful in various applications. In this study, the essential oils antioxidant potential was determined through radical scavenging activity and ferric reducing capacity, and the total phenolic content was measured. These essential oils also demonstrated inhibition capacity against Escherichia coli and Staphylococcus aureus. GC-MS analysis of the oils revealed the composition of representative compounds, with D-limonene constituting almost 75% of the orange essential oil and 1,8-cineol comprising 15.2% of the eucalyptus oil. The antioxidant test results between essential oils showed that they are similar, except for the FRAP test, where eucalyptus essential oil obtained a value three times higher than orange essential oil. The findings suggest that these essential oils can serve as natural and sustainable alternatives to synthetic antimicrobial and antioxidant agents.