Assessment of Sea Salt (SS) and Non-Sea Salt (NSS) aerosols in rainwater is important to understand the characterization of marine and continental aerosols and their source pathways. Sea salt quantification based on standard seawater ratios are primarily constrained with high uncertainty with its own limitations. Here, by the novelty of k-mean clustering and Positive Matrix Factorization (PMF) analysis, we segregate the air masses into two distinct clusters (oceanic and continental) during summer monsoon period signifying the complex intermingle of sources that act concomitantly. The rainwater composition during strong south-westerly wind regimes (cluster 2-oceanic) was profoundly linked with high sea salt and dust, whereas north-westerly low wind regimes (cluster 1-continental) showed an increase in SO42− and NO3−. However, SO42− abundance over NO3− in rain-water depicted its importance as a major acidifying ion at the region. The satellite-based observations indicate the presence of mid-tropospheric dust at the top (3–5 km) and marine sea salt at bottom acts as a “sandwich effect” for maritime clouds that leads to elevated Ca2+, Na+, Mg2+, and Cl− in rainwater. This characteristic feature is unique as sea spray generation due to high surface winds and dust aloft is only seen during this period. Furthermore, four source factors (secondary inorganic aerosol, mixed dust & sea salt, biomass burning & fertilizer use, and calcium neutralization) derived from PMF analysis showed contribution from local activities as well as long-range transport as dominant sources for the rainwater species.