Pocillopora Acuta Research Articles

Signaling pathways in the coral polyp bail-out response

Polyp bail-out is a stress response exhibited by some pocilloporid corals, with mechanisms and consequences distinct from those of bleaching. Although induction of polyp bail-out has been demonstrated in the laboratory, molecular mechanisms underlying this response have rarely been discussed. We conducted genetic analyses of Pocillopora acuta during initiation of hyperosmosis-induced polyp bail-out, using both transcriptomic and qPCR techniques. Beyond upregulation of apoptosis and proteolysis, corals showed significant activation of tumor necrosis factor and fibroblast growth factor (FGF) signaling pathways during induction of polyp bail-out. In our qPCR analysis, a common upregulation profile, peaking at 43.0‰ salinity, was found in the FAS and CASP8 genes, whereas a different profile, showing significant upregulation up to 45.0‰, was displayed by matrix metalloproteinases and genes in the FGF signaling pathway. These results suggest parallel involvement of an extrinsic apoptotic signaling pathway and FGF-mediated extracellular matrix degradation in polyp bail-out. Furthermore, in the XIAP, JNK, and NFKB1 genes, we detected a third expression profile showing linear upregulation that becomes maximal at the endpoint salinity level of the experiment (46.0‰), indicating activation of anti-apoptotic and cell survival signals during polyp bail-out. Our results provide new insights into signaling pathways responsible for polyp bail-out and suggest the feasibility of inducing bail-out by specifically triggering these pathways without exerting lethal stresses on the corals, which in turn will facilitate acquisition of viable polyps for possible use in coral reef restoration.

Gene expression and photophysiological changes in Pocillopora acuta coral holobiont following heat stress and recovery

Gene expression and photophysiological changes in Pocillopora acuta coral holobiont following heat stress and recovery

Molecular-photophysiological changes in Pocillopora acuta coral holobiont following heat stress and recovery

Molecular-photophysiological changes in Pocillopora acuta coral holobiont following heat stress and recovery

Fish farm effluents alter reef benthic assemblages and reduce coral settlement

Fish farming in coastal areas is a rapidly growing industry. However, unregulated fish farming practices that release massive amounts of unconsumed feed and fecal material into the water column, can result in a nutrient-enriched environment that extends to nearby reef systems. To understand the impact of fish farm effluent on coral settlement, we tested the settlement rate of Pocillopora acuta larvae on artificial substrates conditioned for 12 weeks at three sites with increasing distance (2–10 km) from fish farms in Bolinao, Philippines. Sites far from the fish farms had higher biofilm and crustose coralline algae cover. In contrast, the site closest to the fish farms, where nutrient levels were higher, had greater sediment and turf algae cover. Tiles conditioned at the farther sites promoted higher (6–8%) larval settlement whereas tiles from the nearer site had lower settlement (3%). These findings show that fish farm effluents can indirectly affect coral settlement on adjacent reefs by promoting growth of other biota that may inhibit larval settlement and by reducing the availability of suitable substrate.

Symbiont transmission and reproductive mode influence responses of three Hawaiian coral larvae to elevated temperature and nutrients

Elevated temperatures and nutrients are degrading coral reef ecosystems, but the understanding of how early life stages of reef corals respond to these stressors remains limited. Here, we test the impact of temperature (mean ~ 27 °C vs. ~ 29 °C) and nitrate and phosphate enrichment (ambient, + 5 µM nitrate, + 1 µM phosphate and combined + 5 µM nitrate with 1 µM phosphate) on coral larvae using three Hawaiian coral species with different modes of symbiont transmission and reproduction: Lobactis scutaria (horizontal, gonochoric broadcast spawner), Pocillopora acuta (vertical, hermaphroditic brooder) and Montipora capitata (vertical, hermaphroditic broadcast spawner). Temperature and nutrient effects were species specific and appear antagonistic for L. scutaria and M. capitata, but not for P. acuta. Larvae survivorship in all species was lowest under nitrate enrichment at 27 °C. M. capitata and L. scutaria survivorship increased at 29 °C. However, positive effects of warming on survivorship were lost under high nitrate, but phosphate attenuated nitrate effects when N/P ratios were balanced. P. acuta larvae exhibited high survivorship (> 91%) in all treatments and showed little change in larval size, but lower respiration rates at 29 °C. Elevated nutrients (+N+P) led to the greatest loss in larvae size for aposymbiotic L. scutaria, while positive growth in symbiotic M. capitata larvae was reduced under warming and highest in +N+P treatments. Overall, we report a greater sensitivity of broadcast spawners to warming and nutrient changes compared to a brooding coral species. These results suggest variability in biological responses to warming and nutrient enrichment is influenced by life-history traits, including the presence of symbionts (vertical transmission), in addition to nutrient type and nutrient stoichiometry.

The contribution of stress-tolerant endosymbiotic dinoflagellate Durusdinium to Pocillopora acuta survival in a highly urbanized reef system

Urban coral reefs are regarded as marginal communities that live under localized conditions considered detrimental for coral survival, such as high sediment load. They are also impacted by global environmental changes, especially increases in sea surface temperatures. These conditions can cause sub-optimal performance and may lead to dissociation of the mutualistic symbiosis between the coral host and its endosymbionts (Symbiodiniaceae), which provide the majority of the coral’s daily energy budget. While recent studies have explored gene transcriptional responses to extreme conditions using cultured cells of Symbiodiniaceae, it is generally unknown how their responses manifest in hospite. Here, we investigate differential gene expression of endosymbionts hosted by the common reef-building coral Pocillopora acuta, following separate and combined exposures to two major environmental stressors: heat and sediment. We report that Durusdinium largely dominate the Symbiodiniaceae population in P. acuta, which suggests that the observed differential gene expression patterns are mainly responses from this known stress-tolerant endosymbiont genus. Differentially expressed genes were detected in response to heat, and to combined heat and sediment. These genes are associated with various biological processes including apoptosis, cell proliferation, cell–extracellular matrix adhesion, DNA damage repair, lipid catabolism, and lipid homeostasis. Our study provides valuable insights regarding the role of gene regulation by the endosymbiotic dinoflagellates to help maintain health and function of the coral host, which ultimately contributes to the persistence of P. acuta in Singapore’s highly urbanized reefs.

Abundance, size, and survival of recruits of the reef coral Pocillopora acuta under ocean warming and acidification.

Ocean warming and acidification are among the greatest threats to coral reefs. Massive coral bleaching events are becoming increasingly common and are predicted to be more severe and frequent in the near future, putting corals reefs in danger of ecological collapse. This study quantified the abundance, size, and survival of the coral Pocillopora acuta under future projections of ocean warming and acidification. Flow-through mesocosms were exposed to current and future projections of ocean warming and acidification in a factorial design for 22 months. Neither ocean warming or acidification, nor their combination, influenced the size or abundance of P. acuta recruits, but heating impacted subsequent health and survival of the recruits. During annual maximum temperatures, coral recruits in heated tanks experienced higher levels of bleaching and subsequent mortality. Results of this study indicate that P. acuta is able to recruit under projected levels of ocean warming and acidification but are susceptible to bleaching and mortality during the warmest months.

Contact- and Water-Mediated Effects of Macroalgae on the Physiology and Microbiome of Three Indo-Pacific Coral Species

Competitive interactions between corals and macroalgae play an important role in determining benthic community structure on coral reefs. While it is known that macroalgae may negatively affect corals, the relative influence of contact- versus water-mediated macroalgal interactions on corals—such as via an influence on coral-associated microbiomes—is less well understood. Further, the impacts of macroalgae on corals that have persisted in a heavily urbanized reef system have not been explored previously. We examined the effects of the macroalgae Lobophora sp. and Hypnea pannosa on the physiology and microbiome of three Indo-Pacific coral species (Merulina ampliata, Montipora stellata, and Pocillopora acuta) collected from Singapore’s highly urbanized reefs, and compared how these effects varied between direct contact and water-mediated interactions. Direct contact by Lobophora sp. caused visible tissue bleaching and reduced Fv/Fm in all three coral species, while direct contact by H. pannosa only led to slight, but significant, suppression of coral Fv/Fm. No detrimental effects on coral physiology were observed when corals were in close proximity to the macroalgae or when in direct contact with algal mimics. However, both direct contact and water-mediated interactions with Lobophora sp. and H. pannosa altered the prokaryotic community structures in M. stellata. For M. ampliata and P. acuta, the changes in their microbiomes in response to algal treatments were more strongly influenced by the source reefs from which the coral colonies were collected. In particular, coral colonies collected from Kusu Island had proportionately more initial abundances of potentially pathogenic bacteria in their microbiomes than those collected from Pulau Satumu; nevertheless, coral fragments from Kusu Island had the same physiological responses to macroalgal interactions as corals from Pulau Satumu. Overall, our results reveal that, for the species tested, the coral microbiomes were sensitive to both direct contact and water-mediated interactions with macroalgae, while coral physiology was only compromised when in direct contact. Further, the presence of high levels of potentially pathogenic bacteria in some of the coral samples did not lead to the corals being more susceptible to impacts from macroalgae.

Evaluation of laser scanning confocal microscopy as a method for characterizing reef-building coral tissue thickness and Symbiodiniaceae fluorescence.

Predicting the sensitivity of reef-building corals to disturbance, including bleaching, requires an understanding of physiological responses to stressors, which may be limited by destructive sampling and the capacity of common methodologies to characterize early life history stages. We developed a new methodology using laser scanning confocal microscopy (LSCM) to measure and track the physiological condition of corals. In a thermal stress experiment, we used LSCM to track coral condition during bleaching in adults and juveniles of two species, Montipora capitata and Pocillopora acuta Depth of fluorescence in coral tissues provides a proxy measure of tissue thickness, whereas Symbiodiniaceae population fluorescence relates to both population density and chlorophyll a content. In response to thermal stress, there were significant shifts in tissue thickness and Symbiodiniaceae fluorescence with differences between life stages. This method is particularly well suited for detecting shifts in physiological condition of living corals in laboratory studies, especially in small juvenile colonies.

Nutrient and sediment loading affect multiple facets of functionality in a tropical branching coral.

Coral reefs, one of the most diverse ecosystems in the world, face increasing pressures from global and local anthropogenic stressors. Therefore, a better understanding of the ecological ramifications of warming and land-based inputs (e.g. sedimentation and nutrient loading) on coral reef ecosystems is necessary. In this study, we measured how a natural nutrient and sedimentation gradient affected multiple facets of coral functionality, including endosymbiont and coral host response variables, holobiont metabolic responses and percent cover of Pocillopora acuta colonies in Mo'orea, French Polynesia. We used thermal performance curves to quantify the relationship between metabolic rates and temperature along the environmental gradient. We found that algal endosymbiont percent nitrogen content, endosymbiont densities and total chlorophyll a content increased with nutrient input, while endosymbiont nitrogen content per cell decreased, likely representing competition among the algal endosymbionts. Nutrient and sediment loading decreased coral metabolic responses to thermal stress in terms of their thermal performance and metabolic rate processes. The acute thermal optimum for dark respiration decreased, along with the maximal performance for gross photosynthetic and calcification rates. Gross photosynthetic and calcification rates normalized to a reference temperature (26.8°C) decreased along the gradient. Lastly, percent cover of P. acuta colonies decreased by nearly two orders of magnitude along the nutrient gradient. These findings illustrate that nutrient and sediment loading affect multiple levels of coral functionality. Understanding how local-scale anthropogenic stressors influence the responses of corals to temperature can inform coral reef management, particularly in relation to the mediation of land-based inputs into coastal coral reef ecosystems.

Mixed-mode bacterial transmission in the common brooding coral Pocillopora acuta.

Reef-building corals form associations with a huge diversity of microorganisms, which are essential for the survival and well-being of their host. While the acquisition patterns of Symbiodiniaceae microalgal endosymbionts are strongly linked to the coral's reproductive strategy, few studies have investigated the transmission mode of bacteria, especially in brooding species. Here, we relied on 16S rRNA gene and Internal Transcribed Spacer 2 marker metabarcoding in conjunction with fluorescence in situ hybridisation microscopy to describe the onset of microbial associations in the common brooding coral Pocillopora acuta. We analysed the bacterial and Symbiodiniaceae community composition in five adult colonies, their larvae, and 4-day old recruits. Larvae and recruits inherited Symbiodiniaceae, as well as a small number of bacterial strains, from their parents. Rhodobacteraceae and Endozoicomonas were among the most abundant taxa that were likely maternally transmitted to the offspring. The presence of bacterial aggregates in newly released larvae was observed with confocal microscopy, confirming the occurrence of vertical transmission of bacteria in P. acuta. We concluded that host factors, as well as the environmental bacterial pool influenced the microbiome of P. acuta.

Bacterial and algal symbiont dynamics in early recruits exposed to two adult coral species

Corals live in a symbiotic relationship with various microorganisms including bacteria, some of which are essential for host health and survival. Bacterial assemblages are typically highly diverse in juveniles and are speculated to exert roles critical to coral ontogenetic development. However, knowledge about bacterial dynamics in coral recruits is scarce, especially in brooders. In this study, we investigated the temporal dynamics of bacterial communities associated with Pocillopora acuta early recruits exposed to different microbial environments. One week after settlement, recruits were grown in a flow-through system with 0.4 µm filtered seawater either alone, or in the vicinity of adult Pocillopora acuta or Platygyra daedalea coral fragments, which associate with different microbiomes. After 5 weeks, all corals were transferred to a mesocosm containing various marine organisms, where they were reared for another 4 weeks. In addition to observing the development of coral-associated microbial communities, we assessed whether exposing Pocillopora acuta recruits to different adult coral species influenced their bacterial communities. Our motivation was to examine whether this approach can be used to modify bacteria and Symbiodiniaceae associated with these early life stages. While adult Pocillopora acuta fragments had bacterial assemblages dominated by Endozoicomonadaceae, bacterial communities of Platygyra daedalea fragments were dominated by Flammeovirgaceae and Rhodospirillaceae. Bacterial communities associated with recruits were more diverse than those found in adults and contained larger relative abundances of Flavobacteriaceae, Rhodobacteraceae and Erythrobacteraceae. All recruits harbored the same Symbiodiniaceae type throughout the experiment (dominated by Cladocopium C1d sequences), and their bacterial communities did not differ across treatments. Instead, there was a significant change over time characterized by a decline in the relative abundance of Flavobacteriaceae and an increase in the abundance of Endozoicomonadaceae. Our findings indicate that Pocillopora acuta recruits harbor dynamic and diverse bacterial assemblages, which were not influenced by nearby adult corals in our experimental design.

Variability in skeletal bulk densities of common hard corals in Southeast Asia

Skeletal density, a measure of a coral’s investment in its structure and a known proxy for climate history, can potentially be used to enhance the precision of reef accretion models and benefit reef management strategies. However, trait data and an understanding of how it may vary are limited, especially for Southeast Asia’s coral reefs where information is available for only a few species. To fill this knowledge gap, we quantified the skeletal densities of 11 common species from four reefs in Singapore. Skeletal density was best explained by a model that included species, depth, colony size, sedimentation rate, water motion, as well as an interaction between depth and colony size. Mean skeletal densities ranged from 0.99 to 2.01 g cm−3, and species with massive growth forms (e.g. Platygyra sinensis) were least dense, while a branching coral (Pocillopora acuta) was densest. Skeletal density was influenced positively by water motion and negatively by sedimentation and colony size. The depth–size interaction also indicated that large colonies in deeper areas were denser compared to shallow colonies. Our findings suggest that environmental conditions at local scales play important roles in affecting coral skeletal density and provide an indication of the relative vulnerability among taxa and locations to physical disturbances. The need for baseline information on the skeletal properties of more species is further underscored if habitat conservation is to be effective in a changing climate.

Mineral formation in the primary polyps of pocilloporoid corals

In reef-building corals, larval settlement and its rapid calcification provides a unique opportunity to study the bio-calcium carbonate formation mechanism involving skeleton morphological changes. Here we investigate the mineral formation of primary polyps, just after settlement, in two species of the pocilloporoid corals: Stylophora pistillata (Esper, 1797) and Pocillopora acuta (Lamarck, 1816). We show that the initial mineral phase is nascent Mg-Calcite, with rod-like morphology in P. acuta, and dumbbell morphology in S. pistillata. These structures constitute the first layer of the basal plate which is comparable to Rapid Accretion Deposits (Centers of Calcification, CoC) in adult coral skeleton. We found also that the rod-like/dumbbell Mg-Calcite structures in subsequent growth step will merge into larger aggregates by deposition of aragonite needles. Our results suggest that a biologically controlled mineralization of initial skeletal deposits occurs in three steps: first, vesicles filled with divalent ions are formed intracellularly. These vesicles are then transferred to the calcification site, forming nascent Mg-Calcite rod/pristine dumbbell structures. During the third step, aragonite crystals develop between these structures forming spherulite-like aggregates. Statement of SignificanceCoral settlement and recruitment periods are highly sensitive to environmental conditions. Successful mineralization during these periods is vital and influences the coral’s chances of survival. Therefore, understanding the exact mechanism underlying carbonate precipitation is highly important. Here, we used in vivo microscopy, spectroscopy and molecular methods to provide new insights into mineral development. We show that the primary polyp’s mineral arsenal consists of two types of minerals: Mg-Calcite and aragonite. In addition, we provide new insights into the ion pathway by showing that divalent ions are concentrated in intracellular vesicles and are eventually deposited at the calcification site.

Observations of Simultaneous Sperm Release and Larval Planulation Suggest Reproductive Assurance in the Coral Pocillopora acuta

Despite being an extensively studied group of corals, the reproductive biology of the scleractinian genus Pocillopora remains a mystery. Pocillopora acuta has been proposed to exhibit a mixed reproductive mode, sexually producing gametes (sperm and eggs) and asexually brooding larvae simultaneously within a single colony. Here, we report observations of night-time spawning of sperm during the peak monthly larval release period. We offer a new hypothesis for the regulation of sexual and asexual reproduction in the species and posit that sexual reproduction may occur more often than previously suggested. However, the success of internal oocyte fertilization and subsequent zygote development is dependent on sperm making contact with a fertile colony. We hypothesize that asexual development of larvae occurs when sperm is absent, but more extensive genetic, genomic, and histological data are required to determine the pathway by which unfertilized oocytes may develop. We also propose that this mixed mode of reproduction is an adaptation to mating failure, common in sessile marine invertebrates. The reproductive assurance enjoyed by the species may therefore be the key to its ecological and evolutionary persistence.

Characterisation of coral-associated bacterial communities in an urbanised marine environment shows strong divergence over small geographic scales

The coral holobiont contains a diverse community of bacteria that have been widely acknowledged as a major contributor in the maintenance of host health and in promoting reef resilience under changing environments. However, little is known regarding the spatial distribution of these communities or the processes and mechanisms that are responsible for creating these patterns. Here we show that bacterial communities associated with the reef-building coral, Pocillopora acuta, from nine offshore islands in an urbanised coral reef ecosystem (Singapore) can diverge sharply and are significantly different among sampling locations. We suggest that small-scale environmental factors such as prevailing surface currents and wind direction, even over short distances (< 1 km), are responsible for generating bacterial community structure. Considering the sharp differentiation we observe among bacterial communities from different sites, we recommend that future coral reef restoration projects consider the microbial aspect of the coral holobiont as this may affect the success of coral transplants in recipient populations.

Allelopathic effects of macroalgae on Pocillopora acuta coral larvae

Allelopathy has been proposed as a key mechanism mediating coral–algal interactions; however, few studies have tested macroalgal allelochemicals on coral larvae. In this study, we examined the effects of crude extracts from four macroalgal species on Pocillopora acuta larvae under different exposure conditions. Larval mortality increased considerably with increasing concentrations of Bryopsis sp., Endosiphonia horrida, and Lobophora sp. extracts. Increasing E. horrida and Lobophora sp. extract concentrations also substantially decreased larval settlement. No detectable effects on larvae were observed in Hypnea pannosa extracts. Further, while larval mortality increased with exposure duration to Lobophora sp. extracts, larval settlement was enhanced at 12 h exposure, but reduced at shorter and longer durations. Our results emphasize that macroalgal chemical effects are highly dependent on macroalgal species and exposure conditions. On reefs dominated by allelopathic macroalgae, the survivorship and settlement of coral larvae are potentially constrained, thereby limiting the recovery of degraded reefs.

The role of in situ coral nurseries in supporting mobile invertebrate epifauna

Coral nurseries are commonly employed to generate coral material for reef restoration projects, but observations of epifaunal organisms utilising the nurseries for food and shelter indicate that they can also provide important functions beyond that of coral propagation. To examine the level of biodiversity that can be supported by coral nurseries, and investigate if epifaunal communities were influenced by the presence of live coral tissue, we compared the abundance, diversity and community composition of mobile invertebrate epifauna associated with live and dead fragments of three coral species (Pocillopora acuta, Echinopora lamellosa, Platygyra sinensis) that were reared in an in situ nursery. A total of 418 mobile invertebrates spanning 63 taxa were recorded from 22 coral colonies. The three coral species hosted significantly different epifaunal communities, most likely a consequence of the difference in growth forms of the coral hosts. Significant differences in epifaunal communities were only observed between live and dead colonies of P. acuta, indicating that resource provisioning in this species is particularly influenced by the presence of live tissue. Our findings showed that coral nurseries can support a range of mobile invertebrates and function as tools to conserve threatened mobile invertebrates. This ecological function is under-studied and should be assessed in restoration programs for the conservation of corals and associated fauna.

Short Term Exposure to Heat and Sediment Triggers Changes in Coral Gene Expression and Photo-Physiological Performance

Abstract Corals are known to exhibit a suite of mechanisms for survival under stressful conditions with the help of their endosymbiotic Symbiodiniaceae. However, exactly how the host animal responds to varying environmental conditions remains unclear. In this study, we tested two relevant environmental factors that are known to have deleterious effects on corals: heat and sediment. We examined among-genotype responses of Pocillopora acuta to these factors with RNA-Seq in concert with widely-used tools for assessing the physiological conditions of corals. Heat and sediment treatments were applied in a 2 × 2 crossed experimental design: (1) ~30°C without sediment (control, “C”), (2) ~30°C with sediment (sediment-only, “S”), (3) ~32°C without sediment (heat-only, “H”), (4) ~32°C with sediment (heat + sediment, “H+S”) over four consecutive days (3-h daily exposure) in ex situ aquarium conditions. A clear differentiation in gene expression patterns was observed in corals exposed to heat alone and to heat with sediment, relative to the control treatment. Few transcripts (~3) were found to be differentially expressed for corals exposed to sediment only. The greater impact of heat was supported by the photo-physiological measurements that showed significant effects on maximum quantum yield and average symbiont density among genotypes of P. acuta. The combined effect of heat and sediment caused a greater reduction in average symbiont density than the effect of sediment alone. Furthermore, “H+S” disrupted the ability of corals to maintain processes involving assembly and disassembly of cilium which suggest a synergistic effect between the two factors. We also found that host-specific genes which were expressed differentially may not be related to their interactions with algal symbionts. Rather, these genes are involved in a variety of biological functions including, but not limited to, cilium biogenesis and degradation, cilia motility, innate and adaptive immune responses, cell adhesion and bone mineralization, and processes involved in the cell cycle. These results reflect the complex response of the host alone. Overall, our findings indicate that acute heat stress in tandem with sediment can depress photo-physiological performance and trigger considerable changes in host gene expression.

Relative stability of the Pocillopora acuta microbiome throughout a thermal stress event

Rapid climate change due to anthropogenic greenhouse gas emissions is pushing corals to and past their physiological limits, while their microbiome is being pressed towards dysbiosis. Microbes greatly influence the health and functioning of corals, but thermal anomalies that cause bleaching can affect certain taxa of the host-associated prokaryote and Symbiodiniaceae communities, leading corals towards a disease-prone state. In some coral species, however, even significant thermal stress may not result in visible signs of bleaching. Whether changes in the coral microbiome occur in these resilient species during temperature anomalies is not well described. In the present study, we tagged, visually assessed and sampled 10 colonies of the branching coral Pocillopora acuta on a fringing reef off Orpheus Island in the central Great Barrier Reef for 1 yr, of which the summer coincided with the 2016 mass-bleaching event. No visible signs of bleaching were observed in any of the 10 colonies throughout the study period, despite experiencing two degree heating weeks of thermal stress and observations of bleaching in other coral species on the same reef. Metabarcoding based on the Symbiodiniaceae ITS2 rDNA spacer and the bacterial 16S rRNA gene provided evidence for stability of the overall microbial community structure, although the bacterial community showed increases in a number of potentially beneficial taxa, such as diazotrophs, during the thermal stress event. These findings suggest some flexibility in the microbiome to adjust to higher than average temperatures without disrupting microbiome stability, perhaps contributing to the thermal resilience of P. acuta.