T cells dynamically rewire their metabolism during an immune response. We applied single-cell RNA sequencing to CD8+ Tcells activated and differentiated invitro in physiological medium to resolve these metabolic dynamics. We identify a differential time-dependent reliance of activating Tcells on the synthesis versus uptake of various non-essential amino acids, which we corroborate with functional assays. We also identify metabolic genes that potentially dictate the outcome of Tcell differentiation, by ranking them based on their expression dynamics. Among them, we find asparagine synthetase (Asns), whose expression peaks for effector Tcells and decays toward memory formation. Disrupting these expression dynamics by ASNS overexpression promotes an effector phenotype, enhancing the anti-tumor response of adoptively transferred CD8+ Tcells in a mouse melanoma model. We thus provide a resource of dynamic expression changes during CD8+ Tcell activation and differentiation, and identify ASNS expression dynamics as a modulator of CD8+ Tcell differentiation.
Read full abstract