Copper (Cu) ions have been recognized for their efficacy in inactivating bacteria, including Mycobacterium avium subsp. paratuberculosis (MAP), the causative agent of Johne’s disease (JD) known for its resilience to unfavorable conditions. However, the response of MAP isolates isolated from cows to Cu exposure remains inadequately understood, as their responses may differ from those of laboratory-adapted reference strains. In this study, we examined the response of MAP isolates obtained from MAP-infected and affected cows to Cu ion treatment, comparing that with the response of the reference strain ATCC 19698 to the same treatment. Three MAP field isolates and the MAP reference strain were exposed to Cu ions, and their viability, protein/lipid damage, ROS production, and gene expression were evaluated in triplicate. Survival differed among isolates, with an isolate from a cow with clinical JD exhibiting increased tolerance to Cu exposure. While Cu treatment induced lipid peroxidation and ROS production across all isolates, genes associated with Cu detoxification and virulence were upregulated, particularly in the reference strain. Whole genome sequencing analysis revealed that, despite genomic similarities between field isolates and the reference strain ATCC 19698, there were differences regarding the presence/absence of genes related with certain virulence factors. Further research on Cu exposure with larger numbers of MAP isolates is needed to explain the stress-induced responses that influence MAP survival during natural infections and in challenging environments.
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