Perennial C4 Research Articles

Accelerated development in Johnsongrass seedlings (Sorghum halepense) suppresses the growth of native grasses through size-asymmetric competition.

Invasive plant species often dominate native species in competition, augmenting other potential advantages such as release from natural enemies. Resource pre-emption may be a particularly important mechanism for establishing dominance over competitors of the same functional type. We hypothesized that competitive success of an exotic grass against native grasses is mediated by establishing an early size advantage. We tested this prediction among four perennial C4 warm-season grasses: the exotic weed Johnsongrass (Sorghum halepense), big bluestem (Andropogon gerardii), little bluestem (Schizachyrium scoparius) and switchgrass (Panicum virgatum). We predicted that a) the competitive effect of Johnsongrass on target species would be proportional to their initial biomass difference, b) competitive effect and response would be negatively correlated and c) soil fertility would have little effect on competitive relationships. In a greenhouse, plants of the four species were grown from seed either alone or with one Johnsongrass neighbor at two fertilizer levels and periodically harvested. The first two hypotheses were supported: The seedling biomass of single plants at first harvest (50 days after seeding) ranked the same way as the competitive effect of Johnsongrass on target species: Johnsongrass < big bluestem < little bluestem/switchgrass, while Johnsongrass responded more strongly to competition from Johnsongrass than from native species. At final harvest, native plants growing with Johnsongrass attained between 2–5% of their single-plant non-root biomass, while Johnsongrass growing with native species attained 89% of single-plant non-root biomass. Fertilization enhanced Johnsongrass’ competitive effects on native species, but added little to the already severe competitive suppression. Accelerated early growth of Johnsongrass seedlings relative to native seedlings appeared to enable subsequent resource pre-emption. Size-asymmetric competition and resource-pre-emption may be a critical mechanism by which exotic invasive species displace functionally similar native species and alter the functional dynamics of native communities.

Allometric Models for Predicting Aboveground Biomass and Carbon Stock of Tropical Perennial C4 Grasses in Hawaii.

Biomass is a promising renewable energy option that provides a more environmentally sustainable alternative to fossil resources by reducing the net flux of greenhouse gasses to the atmosphere. Yet, allometric models that allow the prediction of aboveground biomass (AGB), biomass carbon (C) stock non-destructively have not yet been developed for tropical perennial C4 grasses currently under consideration as potential bioenergy feedstock in Hawaii and other subtropical and tropical locations. The objectives of this study were to develop optimal allometric relationships and site-specific models to predict AGB, biomass C stock of napiergrass, energycane, and sugarcane under cultivation practices for renewable energy and validate these site-specific models against independent data sets generated from sites with widely different environments. Several allometric models were developed for each species from data at a low elevation field on the island of Maui, Hawaii. A simple power model with stalk diameter (D) was best related to AGB and biomass C stock for napiergrass, energycane, and sugarcane, (R2 = 0.98, 0.96, and 0.97, respectively). The models were then tested against data collected from independent fields across an environmental gradient. For all crops, the models over-predicted AGB in plants with lower stalk D, but AGB was under-predicted in plants with higher stalk D. The models using stalk D were better for biomass prediction compared to dewlap H (Height from the base cut to most recently exposed leaf dewlap) models, which showed weak validation performance. Although stalk D model performed better, however, the mean square error (MSE)-systematic was ranged from 23 to 43 % of MSE for all crops. A strong relationship between model coefficient and rainfall was existed, although these were irrigated systems; suggesting a simple site-specific coefficient modulator for rainfall to reduce systematic errors in water-limited areas. These allometric equations provide a tool for farmers in the tropics to estimate perennial C4 grass biomass and C stock during decision-making for land management and as an environmental sustainability indicator within a renewable energy system.

Improved tissue culture conditions for the emerging C4 model Panicum hallii

BackgroundPanicum hallii Vasey (Hall’s panicgrass) is a compact, perennial C4 grass in the family Poaceae, which has potential to enable bioenergy research for switchgrass (Panicum virgatum L.). Unlike P. hallii, switchgrass has a large genome, allopolyploidy, self-incompatibility, a long life cycle, and large stature—all suboptimal traits for rapid genetics research. Herein we improved tissue culture methodologies for two inbred P. hallii populations: FIL2 and HAL2, to enable further development of P. hallii as a model C4 plant.ResultsThe optimal seed-derived callus induction medium was determined to be Murashige and Skoog (MS) medium supplemented with 40 mg L−1 L-cysteine, 300 mg L−1 L-proline, 3% sucrose, 1 g L−1 casein hydrolysate, 3 mg L−1 2,4-dichlorophenoxyacetic acid (2,4-D), and 45 μg L−1 6-benzylaminopurine (BAP), which resulted in callus induction of 51 ± 29% for FIL2 and 81 ± 19% for HAL2. The optimal inflorescence-derived callus induction was observed on MP medium (MS medium supplemented with 2 g L−1 L-proline, 3% maltose, 5 mg L−1 2,4-D, and 500 μg L−1 BAP), resulting in callus induction of 100 ± 0.0% for FIL2 and 84 ± 2.4% for HAL2. Shoot regeneration rates of 11.5 ± 0.8 shoots/gram for FIL2 and 11.3 ± 0.6 shoots/gram for HAL2 were achieved using seed-induced callus, whereas shoot regeneration rates of 26.2 ± 2.6 shoots/gram for FIL2 and 29.3 ± 3.6 shoots/gram for HAL2 were achieved from inflorescence-induced callus. Further, cell suspension cultures of P. hallii were established from seed-derived callus, providing faster generation of callus tissue compared with culture using solidified media (1.41-fold increase for FIL2 and 3.00-fold increase for HAL2).ConclusionsAside from abbreviated tissue culture times from callus induction to plant regeneration for HAL2, we noted no apparent differences between FIL2 and HAL2 populations in tissue culture performance. For both populations, the cell suspension cultures outperformed tissue cultures on solidified media. Using the methods developed in this work, P. hallii callus was induced from seeds immediately after harvest in a shorter time and with higher frequencies than switchgrass. For clonal propagation, P. hallii callus was established from R1 inflorescences, similar to switchgrass, which further strengthens the potential of this plant as a C4 model for genetic studies. The rapid cycling (seed-to-seed time) and ease of culture, further demonstrate the potential utility of P. hallii as a C4 model plant.

Site-Specific Management of Miscanthus Genotypes for Combustion and Anaerobic Digestion: A Comparison of Energy Yields.

In Europe, the perennial C4 grass miscanthus is currently mainly cultivated for energy generation via combustion. In recent years, anaerobic digestion has been identified as a promising alternative utilization pathway. Anaerobic digestion produces a higher-value intermediate (biogas), which can be upgraded to biomethane, stored in the existing natural gas infrastructure and further utilized as a transport fuel or in combined heat and power plants. However, the upgrading of the solid biomass into gaseous fuel leads to conversion-related energy losses, the level of which depends on the cultivation parameters genotype, location, and harvest date. Thus, site-specific crop management needs to be adapted to the intended utilization pathway. The objectives of this paper are to quantify (i) the impact of genotype, location and harvest date on energy yields of anaerobic digestion and combustion and (ii) the conversion losses of upgrading solid biomass into biogas. For this purpose, five miscanthus genotypes (OPM 3, 6, 9, 11, 14), three cultivation locations (Adana, Moscow, Stuttgart), and up to six harvest dates (August–March) were assessed. Anaerobic digestion yielded, on average, 35% less energy than combustion. Genotype, location, and harvest date all had significant impacts on the energy yield. For both, this is determined by dry matter yield and ash content and additionally by substrate-specific methane yield for anaerobic digestion and moisture content for combustion. Averaged over all locations and genotypes, an early harvest in August led to 25% and a late harvest to 45% conversion losses. However, each utilization option has its own optimal harvest date, determined by biomass yield, biomass quality, and cutting tolerance. By applying an autumn green harvest for anaerobic digestion and a delayed harvest for combustion, the conversion-related energy loss was reduced to an average of 18%. This clearly shows that the delayed harvest required to maintain biomass quality for combustion is accompanied by high energy losses through yield reduction over winter. The pre-winter harvest applied in the biogas utilization pathway avoids these yield losses and largely compensates for the conversion-related energy losses of anaerobic digestion.

Molecular Regulation of Flowering Time in Grasses

Flowering time is a key target trait for extending the vegetative phase to increase biomass in bioenergy crops such as perennial C4 grasses. Molecular genetic studies allow the identification of genes involved in the control of flowering in different species. Some regulatory factors of the Arabidopsis pathway are conserved in other plant species such as grasses. However, differences in the function of particular genes confer specific responses to flowering. One of the major pathways is photoperiod regulation, based on the interaction of the circadian clock and environmental light signals. Depending on their requirements for day-length plants can be classified as long-day (LD), short-day (SD), and day-neutral. The CONSTANS (CO) and Heading Date 1 (Hd1), orthologos genes, are central regulators in the flowering of Arabidopsis and rice, LD and SD plants, respectively. Additionally, Early heading date 1 (Ehd1) induces the expression of Heading date 3a (Hd3a), conferring SD promotion and controls Rice Flowering Locus T 1 (RFT1) in LD conditions, independently of Hd1. Nevertheless, the mechanisms promoting flowering in perennial bioenergy crops are poorly understood. Recent progress on the regulatory network of important gramineous crops and components involved in flowering control will be discussed.

Water use efficiency and shoot biomass production under water limitation is negatively correlated to the discrimination against 13C in the C3 grasses Dactylis glomerata, Festuca arundinacea and Phalaris arundinacea

Climate change impacts rainfall patterns which may lead to drought stress in rain-fed agricultural systems. Crops with higher drought tolerance are required on marginal land with low precipitation or on soils with low water retention used for biomass production. It is essential to obtain plant breeding tools, which can identify genotypes with improved drought tolerance and water use efficiency (WUE). In C3 plant species, the variation in discrimination against 13C (Δ13C) during photosynthesis has been shown to be a potential indicator for WUE, where discrimination against 13C and WUE were negatively correlated. The aim of this study was to determine the variation in the discrimination against 13C between species and cultivars of three perennial C3 grasses (Dactylis glomerata (cocksfoot), Festuca arundinacea (tall fescue) and Phalaris arundinacea (reed canary grass)) and test the relationships between discrimination against 13C, season-long water use WUEB, shoot and root biomass production in plants grown under well-watered and water-limited conditions. The grasses were grown in the greenhouse and exposed to two irrigation regimes, which corresponded to 25% and 60% water holding capacity, respectively. We found negative relationships between discrimination against 13C and WUEB and between discrimination against 13C and shoot biomass production, under both the well-watered and water-limited growth conditions (p < 0.001). Discrimination against 13C decreased in response to water limitation (p < 0.001). We found interspecific differences in the discrimination against 13C, WUEB, and shoot biomass production, where the cocksfoot cultivars showed lowest and the reed canary grass cultivars highest values of discrimination against 13C. Cocksfoot cultivars also showed highest WUEB, shoot biomass production and potential tolerance to water limitation. We conclude that discrimination against 13C appears to be a useful indicator, when selecting C3 grass crops for biomass production under drought conditions.

喀斯特石漠化地区不同退耕年限下桂牧1号杂交象草植物-土壤-微生物生态化学计量特征

PDF HTML阅读 XML下载 导出引用 引用提醒 喀斯特石漠化地区不同退耕年限下桂牧1号杂交象草植物-土壤-微生物生态化学计量特征 DOI: 10.5846/stxb201508181723 作者: 作者单位: 中国科学院亚热带农业生态研究所亚热带农业生态过程重点实验室,中国科学院亚热带农业生态研究所亚热带农业生态过程重点实验室,中国科学院亚热带农业生态研究所亚热带农业生态过程重点实验室,中国科学院亚热带农业生态研究所亚热带农业生态过程重点实验室,中国科学院亚热带农业生态研究所亚热带农业生态过程重点实验室,中国科学院亚热带农业生态研究所亚热带农业生态过程重点实验室 作者简介: 通讯作者: 中图分类号: S153.6 基金项目: 中国科学院科技服务网络计划（STS计划）资助项目（KFJ-EW-STS-092）；国家自然科学基金资助项目（41471445） Ecological stoichiometric characteristics of plants, soil, and microbes of Pennisetum purpureum cv. Guimu-1 pastures at different rehabilitation ages in a karst rocky desertification region Author: Affiliation: Institute of Subtropical Agriculture, Chinese Academy of Sciences,,Institute of Subtropical Agriculture, Chinese Academy of Sciences,,, Fund Project: 摘要 | 图/表 | 访问统计 | 参考文献 | 相似文献 | 引证文献 | 资源附件 | 文章评论 摘要:耕地农作物种植与退耕地种草养畜是喀斯特主要的农业生产模式。以喀斯特地区农耕玉米地为对照，研究退耕还草1、5、7a（恢复初期、旺盛期、衰退期）3种年限下桂牧1号杂交象草地植物-土壤-微生物C、N、P生态化学计量特征及内在关联。结果表明：1）牧草地植物地上部分N、P含量均为5a牧草 < 1a牧草 < 7a牧草，C含量则刚好相反；3种退耕年限牧草地植物地上部分C：N、C：P、N：P分别为26.50-33.91、631.70-2254.33、23.89-67.21，且均表现为7a牧草 < 1a牧草 < 5a牧草。2）土壤表层（0-10 cm）C、N、P含量均以玉米地最低，3种退耕年限牧草地中则均为5a牧草地最低；土壤C：N、C：P、N：P在玉米及退耕牧草地之间均无显著差异（P > 0.05），平均值分别为9.20，27.88，3.38。3）玉米及牧草地土壤MBC、MBN、MBP含量存在显著差异（P < 0.05）；玉米地MBC/SOC、MBN/TN、MBP/TP均高于牧草地，3种退耕年限牧草地中，则均为5a牧草地最高。4）MBC、MBP与土壤C、P含量分别呈显著线性正相关（P < 0.05）；植物C、C：N与土壤C、N含量均呈极显著线性负相关（P < 0.01）。分析表明，退耕还草地中植物与土壤系统C-N-P化学计量比表现出不一致的时间变化特征，且牧草地植物受P限制严重，尤以恢复旺盛期为甚。 Abstract:Ecological stoichiometry has become the focus of research in ecological sciences in recent years and many studies have examined the carbon:nitrogen:phosphorus (C:N:P) stoichiometry of plants, soil, or litter in forest communities. However, few studies have explored the stoichiometric characteristics of herbs at different ages. Elephant grass, Pennisetum purpureum cv. Guimu-1, is a tall perennial C4 grass that can withstand repeated cutting and regenerates rapidly, and has been widely cultivated in northwest Guangxi, China because of the "grain for green" policy. For enhanced understanding of the nutrient cycling characteristics of artificial forage at different time scales in fragile karst ecosystems, we investigated the C:N:P stoichiometric characteristics of plant-soil-microbe interactions in Guimu-1 pastures of different growth ages. Corn and three different restoration stage pastures (1-, 5-, and 7-y-old Guimu-1 pastures, representing initial restoration, vigorous restoration, and degenerating stages, respectively, after returning farmland to grassland) were chosen in northwest Guangxi, China to determine the C, N, and P contents and the C:N:P stoichiometry. The results showed that:(1) the C, N, P contents and C:N:P ratios in the aerial portion of plants varied with different artificial Guimu-1 pasture ages. The N and P contents of the plant aerial portion in different years all followed the same order:5-y-old < 1-y-old < 7-y-old pastures, whereas the C content followed the reverse order. Plant C:N, C:P, and N:P ratios, which varied over a large range from 26.50 to 33.91, 631.70 to 2254.33, and 23.89 to 67.21, respectively, were all in the order of 7-y-old < 1-y-old < 5-y-old pastures. (2) Soil C, N, and P in the topsoil layer (0-10 cm) all showed the same order:corn field < 5-y-old < 1-y-old < 7-y-old pastures. However, there were no significant differences among the soil C:N, C:P, and N:P ratios for the four herb types (P > 0.05), with average values of 9.20, 27.88, 3.38, respectively. (3) Soil microbial C biomass (MBC), microbial N biomass (MBN), and microbial P biomass (MBP) showed significant differences among the different plant types (P < 0.05). The corn field had the highest MBC/soil organic C, MBN/total N, and MBP/total P ratios among the four plant types, while the 5-y-old pasture had the highest ratios among the three different aged pastures. (4) Correlation analysis showed that:(a) there were significant positive linear correlations between MBC and soil C, and MBP and soil P (P < 0.05); (b) there were highly significant negative linear correlations between plant and soil C, plant C and soil N, plant C:N and soil C, and plant C:N and soil N (P < 0.01); and (c) there were highly significant positive linear correlations between plant N and soil C, and plant and soil N (P < 0.01). Thus, the determination of C, N, and P stoichiometric characteristics of plant-soil-microbe interactions in the present study showed that in karst ecosystems, croplands were more limited by N than by P, whereas artificial pastures in rehabilitated land were mainly limited by P, especially during the vigorous restoration stage. Plant C:N:P stoichiometric characteristics in pastures at different ages showed a higher temporal variability than those of soil. 参考文献 相似文献 引证文献

Environmental Performance of Miscanthus, Switchgrass and Maize: Can C4 Perennials Increase the Sustainability of Biogas Production?

Biogas is considered a promising option for complementing the fluctuating energy supply from other renewable sources. Maize is currently the dominant biogas crop, but its environmental performance is questionable. Through its replacement with high-yielding and nutrient-efficient perennial C4 grasses, the environmental impact of biogas could be considerably improved. The objective of this paper is to assess and compare the environmental performance of the biogas production and utilization of perennial miscanthus and switchgrass and annual maize. An LCA was performed using data from field trials, assessing the impact in the five categories: climate change (CC), fossil fuel depletion (FFD), terrestrial acidification (TA), freshwater eutrophication (FE) and marine eutrophication (ME). A system expansion approach was adopted to include a fossil reference. All three crops showed significantly lower CC and FFD potentials than the fossil reference, but higher TA and FE potentials, with nitrogen fertilizer production and fertilizer-induced emissions identified as hot spots. Miscanthus performed best and changing the input substrate from maize to miscanthus led to average reductions of −66% CC; −74% FFD; −63% FE; −60% ME and −21% TA. These results show that perennial C4 grasses and miscanthus in particular have the potential to improve the sustainability of the biogas sector.

NMR-based Metabolomics to Study the Cold-acclimation Strategy of Two Miscanthus Genotypes.

Abiotic stress is a major cause of yield loss in plant culture. Miscanthus, a perennial C4 grass, is now considered a major source of renewable energy, especially for biofuel production. During the first year of planting in Northern Europe, Miscanthus was exposed to frost temperature, which generated high mortality in young plants and large loss of yield. One strategy to avoid such loss is to apply cold-acclimation, which confers on plants a better resistance to low temperature. The aim of this study is to describe the effect of a cold-acclimation period on the metabolome of two Miscanthus genotypes that vary in their frost sensitivity at the juvenile stage. Miscanthus × giganteus (GIG) is particularly sensitive to frost, whereas Miscanthus sinensis August Feder (AUG) is tolerant. Polar metabolite extraction was performed on Miscanthus, grown in non-acclimated or cold-acclimated conditions. Extracts were analysed by 1 H-NMR followed by multivariate statistical analysis. Discriminant metabolites were identified. More than 40 metabolites were identified in the two Miscanthus genotypes. GIG and AUG showed a different metabolic background before cold treatment, probably related to their genetic background. After cold-acclimation, GIG and AUG metabolomes remained different. The tolerant genotype showed notably higher levels of accumulation in proline, sucrose and maltose when subjected to cold. These two genotypes seem to have a different adaptation strategy in cold conditions. The studied change in the metabolome concerns different types of molecules related to the cold-tolerant behaviour of Miscanthus. Copyright © 2016 John Wiley & Sons, Ltd.

Local Environmental Context Conditions the Impact of Russian Olive in a Heterogeneous Riparian Ecosystem

Local abiotic and biotic conditions can alter the strength of exotic species impacts. To better understand the effects of exotic species on invaded ecosystems and to prioritize management efforts, it is important that exotic species impacts are put in local environmental context. We studied how differences in plant community composition, photosynthetically active radiation (PAR), and available soil N associated with Russian olive presence are conditioned by local environmental variation within a western U.S. riparian ecosystem. In four sites along the South Fork of the Republican River in Colorado, we established 200 pairs of plots (underneath and apart from Russian olive) to measure the effects of invasion across the ecosystem. We used a series of a priori mixed models to identify environmental variables that altered the effects of Russian olive. For all response variables, models that included the interaction of environmental characteristics, such as presence/absence of an existing cottonwood canopy, with the presence/absence of Russian olive canopy were stronger candidate models than those that just included Russian olive canopy presence as a factor. Compared with reference plots outside of Russian olive canopy, plots underneath Russian olive had higher relative exotic cover (exotic/total cover), lower perennial C4 grass cover, and higher perennial forb cover. These effects were reduced, however, in the presence of a cottonwood canopy. As expected, Russian olive was associated with reduced PAR and increased N, but these effects were reduced under cottonwood canopy. Our results demonstrate that local abiotic and biotic environmental factors condition the effects of Russian olive within a heterogeneous riparian ecosystem and suggest that management efforts should be focused in open areas where Russian olive impacts are strongest.

Effects of nitrogen fertilization and cutting intensity on the agronomic performance of warm‐season grasses

AbstractResponses of grasses to N fertilization are affected by cutting intensity although little is known regarding the interactions of these factors in warm‐season grasses. Pre‐cutting canopy height, herbage accumulation and changes in the nutritive value of warm‐season grasses in response to four different management strategies were assessed from October 2011 to September 2014. Treatments included two cutting intensities (70 vs. 50% depletion of canopy height set by 95% light interception), two N fertilization levels (zero vs. 300 kg N ha−1 year−1) and six perennial C4 grass species (Axonopus catharinensis; Cynodon spp. hybrid Tifton 85; Hemarthria altissima cv. Flórida; Megathyrsus maximus cv. Aruana; Paspalum notatum cv. Pensacola; and Urochloa brizantha cv. Marandu) grown in monoculture in a factorial experimental design. Canopy height varied among grass species, cutting intensity and N treatments, mainly among seasons, indicating that more than one management target (i.e. canopy height) existed throughout the plant growth cycle for each species. The largest herbage accumulation occurred in the N fertilization treatments for most species, regardless of cutting intensity. Nitrogen fertilization and 50% depletion of canopy height increased the leaf proportion and decreased the neutral detergent fibre content. Overall, N fertilization had a stronger positive impact than cutting intensity on the acid detergent fibre content, dry‐matter digestibility and crude protein content, but the magnitudes of the responses were species‐specific.

Herbaceous Legume Encroachment Reduces Grass Productivity and Density in Arid Rangelands.

Worldwide savannas and arid grasslands are mainly used for livestock grazing, providing livelihood to over a billion people. While normally dominated by perennial C4 grasses, these rangelands are increasingly affected by the massive spread of native, mainly woody legumes. The consequences are often a repression of grass cover and productivity, leading to a reduced carrying capacity. While such encroachment by woody plants has been extensively researched, studies on similar processes involving herbaceous species are rare. We studied the impact of a sustained and massive spread of the native herbaceous legume Crotalaria podocarpa in Namibia’s escarpment region on the locally dominant fodder grasses Stipagrostis ciliata and Stipagrostis uniplumis. We measured tussock densities, biomass production of individual tussocks and tussock dormancy state of Stipagrostis on ten 10 m x 10 m plots affected and ten similarly-sized plots unaffected by C. podocarpa over eight consecutive years and under different seasonal rainfalls and estimated the potential relative productivity of the land. We found the percentage of active Stipagrostis tussocks and the biomass production of individual tussocks to increase asymptotically with higher seasonal rainfall reaching a maximum around 300 mm while the land’s relative productivity under average local rainfall conditions reached only 40% of its potential. Crotalaria podocarpa encroachment had no effect on the proportion of productive grass tussocks, but reduced he productivity of individual Stipagrostis tussocks by a third. This effect of C. podocarpa on grass productivity was immediate and direct and was not compensated for by above-average rainfall. Besides this immediate effect, over time, the density of grass tussocks declined by more than 50% in areas encroached by C. podocarpa further and lastingly reducing the lands carrying capacity. The effects of C. podocarpa on grass productivity hereby resemble those of woody encroachers. Therefore, against the background of global change, the spread of herbaceous legumes and the underlying patterns needs to be further investigated to develop adequate counter measures for a sustainable land use.

Bundle-sheath leakiness and intrinsic water use efficiency of a perennial C4 grass are increased at high vapour pressure deficit during growth.

Bundle-sheath leakiness (ϕ) is a key parameter of the CO2-concentrating mechanism of C4 photosynthesis and is related to leaf-level intrinsic water use efficiency (WUEi). This work studied short-term dynamic responses of ϕ to alterations of atmospheric CO2 concentration in Cleistogenes squarrosa, a perennial grass, grown at high (1.6 kPa) or low (0.6 kPa) vapour pressure deficit (VPD) combined with high or low N supply in controlled environment experiments. ϕ was determined by concurrent measurements of photosynthetic gas exchange and on-line carbon isotope discrimination, using a new protocol. Growth at high VPD led to an increase of ϕ by 0.13 and a concurrent increase of WUEi by 14%, with similar effects at both N levels. ϕ responded dynamically to intercellular CO2 concentration (C i), increasing with C i Across treatments, ϕ was negatively correlated to the ratio of CO2 saturated assimilation rate to carboxylation efficiency (a proxy of the relative activities of Rubisco and phosphoenolpyruvate carboxylase) indicating that the long-term environmental effect on ϕ was related to the balance between C3 and C4 cycles. Our study revealed considerable dynamic and long-term variation in ϕ of C. squarrosa, suggesting that ϕ should be determined when carbon isotope discrimination is used to assess WUEi Also, the data indicate a trade-off between WUEi and energetic efficiency in C. squarrosa.

Exploiting Differential Vegetation Phenology for Satellite-Based Mapping of Semiarid Grass Vegetation in the Southwestern United States and Northern Mexico

We developed and evaluated a methodology for subpixel discrimination and large-area mapping of the perennial warm-season (C4) grass component of vegetation cover in mixed-composition landscapes of the southwestern United States and northern Mexico. We describe the methodology within a general, conceptual framework that we identify as the differential vegetation phenology (DVP) paradigm. We introduce a DVP index, the Normalized Difference Phenometric Index (NDPI) that provides vegetation type-specific information at the subpixel scale by exploiting differential patterns of vegetation phenology detectable in time-series spectral vegetation index (VI) data from multispectral land imagers. We used modified soil-adjusted vegetation index (MSAVI2) data from Landsat to develop the NDPI, and MSAVI2 data from MODIS to compare its performance relative to one alternate DVP metric (difference of spring average MSAVI2 and summer maximum MSAVI2), and two simple, conventional VI metrics (summer average MSAVI2, summer maximum MSAVI2). The NDPI in a scaled form (NDPIs) performed best in predicting variation in perennial C4 grass cover as estimated from landscape photographs at 92 sites (R2 = 0.76, p &lt; 0.001), indicating improvement over the alternate DVP metric (R2 = 0.73, p &lt; 0.001) and substantial improvement over the two conventional VI metrics (R2 = 0.62 and 0.56, p &lt; 0.001). The results suggest DVP-based methods, and the NDPI in particular, can be effective for subpixel discrimination and mapping of exposed perennial C4 grass cover within mixed-composition landscapes of the Southwest, and potentially for monitoring of its response to drought, climate change, grazing and other factors, including land management. With appropriate adjustments, the method could potentially be used for subpixel discrimination and mapping of grass or other vegetation types in other regions where the vegetation components of the landscape exhibit contrasting seasonal patterns of phenology.

Genomic skimming for identification of medium/highly abundant transposable elements in Arundo donax and Arundo plinii.

Transposable elements (TEs) are the most abundant genetic material for almost all eukaryotic genomes. Their effects on the host genomes range from an extensive size variation to the regulation of gene expression, altering gene function and creating new genes. Because of TEs pivotal contribute to the host genome structure and regulation, their identification and characterization provide a wealth of useful data for gaining an in-depth understanding of host genome functioning. The giant reed (Arundo donax) is a perennial rhizomatous C3 grass, octadecaploid, with an estimated nuclear genome size of 2744 Mbp. It is a promising feedstock for second-generation biofuels and biomethane production. To identify and characterize the most repetitive TEs in the genomes of A. donax and its ancestral A. plinii species, we carried out low-coverage whole genome shotgun sequencing for both species. Using a de novo repeat identification approach, 33,041 and 28,237 non-redundant repetitive sequences were identified and characterized in A. donax and A. plinii genomes, representing 37.55 and 31.68% of each genome, respectively. Comparative phylogenetic analyses, including the major TE classes identified in A. donax and A. plinii, together with rice and maize TE paralogs, were carried out to understand the evolutionary relationship of the most abundant TE classes. Highly conserved copies of RIRE1-like Ty1-Copia elements were discovered in two Arundo spp. in which they represented nearly 3% of each genomic sequence. We identified and characterized the medium/highly repetitive TEs in two unexplored polyploid genomes, thus generating useful information for the study of the genomic structure, composition, and functioning of these two non-model species. We provided a valuable resource that could be exploited in any effort aimed at sequencing and assembling these two genomes.

Nutrient deficiency and hypoxia as constraints to Panicum coloratum growth in alkaline soils

AbstractAlkaline and saline–alkaline soils impose severe restrictions on plant growth. Panicum coloratum var. coloratum is a perennial C4 forage grass widely used in tropical and subtropical environments. Published information on its responses to alkaline soil conditions is scarce. The objectives of this study were (i) to characterize the effects of alkaline substrates on germination and initial growth in this species, (ii) to assess the influence of high pH in combination with reduced availability of either nutrients or oxygen and salinity, on plant growth and (iii) to evaluate some physiological traits potentially responsible for growth restrictions under alkaline soil conditions. Trials were conducted in a greenhouse. Germination and early plant survival were not affected by alkalinity. To isolate the effects of high pH, reduced nutrient and oxygen availability on growth, plants were grown either in neutral or alkaline soil, in hydroponics, in neutralized alkaline soil (with or without supplementary fertilization), or were flooded to induce hypoxia. Alkalinity effects on growth in hydroponics were milder than in soil. Growth in alkaline soil with nutrient supplement was still significantly lower (by 40%) than in neutral soil. Both alkalinity and hypoxia reduced growth non‐synergistically. These results show that studies of plant response to alkaline substrates carried out in aerated nutrient solutions can only partially address the complexity of this stress. Photosynthesis and PSII activity were among the physiological mechanisms negatively affected by alkalinity and may be partially responsible for the growth limitations observed in P. coloratum under alkaline conditions.

Bioethanol production from pretreated Miscanthus floridulus biomass by simultaneous saccharification and fermentation

The production of ethanol from the fast-growing perennial C4 grass Miscanthus floridulus by simultaneous saccharification and fermentation (SSF) was investigated. M. floridulus biomass was composed of 36.3% glucan, 22.8% hemicellulose, and 21.3% lignin (based on dried mass). Prior to SSF, harvested stems of M. floridulus were pretreated separately by alkali treatment at room temperature, alkali treatment at 90 °C, steam explosion, and acid-catalyzed steam explosion. The delignification rates were determined to be 73.7%, 61.5%, 42.7%, and 63.5%, respectively, by these four methods, and the hemicellulose removal rates were 51.5%, 85.1%, 70.5%, and 97.3%, respectively. SSF of residual solids after various pretreatments was performed with dried yeast (Saccharomyces cerevisiae) and cellulases (Accellerase 1000) by using 10% water-insoluble solids (WIS) of the pretreated M. floridulus as the substrate. The ethanol yields from 72-h SSF of M. floridulus biomass after these pretreatments were 48.9 ± 3.5, 78.4 ± 1.0, 46.4 ± 0.1, and 69.0 ± 0.1% (w/w), respectively, while the ethanol concentrations after 72-h SSF were determined to be 15.4 ± 1.1, 27.5 ± 0.3, 13.9 ± 0.1, and 30.8 ± 0.1 g/L, respectively. Overall, the highest amount of ethanol (0.124 g/g-dried raw material) was generated from dried raw material of M. floridulus after alkaline pretreatment at 90 °C. The acid-catalyzed steam explosion pretreatment also resulted in a high ethanol yield (0.122 g/g-dried raw material). Pretreatment resulting in high lignin and hemicellulose removal rates could make biomass more accessible to enzyme hydrolysis and lead to higher ethanol production.

The endophytic bacteria isolated from elephant grass (Pennisetum purpureum Schumach) promote plant growth and enhance salt tolerance of Hybrid Pennisetum.

BackgroundElephant grass (Pennisetum purpureum Schumach) and Hybrid Pennisetum (Pennisetum americanum × P. purpureum Schumach) are tall, fast-growing perennial C4 bunchgrasses that have been in recent developed as the most appropriate biomass feedstock in many countries for exploring various biofuel products. However, the challenges of increasing plant biomass yield and enhancing their stress tolerance, especially on marginal lands, have been existed for a long while. In the past several years, bacterial endophytes used as bio-fertilizers for improving crop production have offered an opportunity to facilitate high biomass yield of energy crops in a more sustainable manner.ResultsA total of 16 endophytic bacteria strains were isolated and purified from the roots of elephant grass, which were classified into four bacterial genera: Sphingomonas, Pantoea, Bacillus, and Enterobacter. Four strains, pp01, pp02, pp04, and pp06, represented four different genera, were then selected and tested in vitro for their plant growth promoting properties, effects on plant growth and salt stress tolerance of Hybrid Pennisetum. The inoculation with these four bacterial mixture demonstrated a significant plant growth promotion for Hybrid Pennisetum from the normal to salt stress conditions at 0, 50, 100, and 200 mM NaCl, respectively. The highest promotion rate for biomass yield was 116.01 and 81.72 % for shoot fresh weight and dry weight, respectively. The bacterial strains tested were shown to solubilize insoluble phosphate, fix nitrogen, produce indole acetic acid and ammonia, but only strains from Sphingomonas, Bacillus, and Enterobacter can produce siderophore. In addition, the endophyte strains tested were all able to successfully colonize the roots of Hybrid Pennisetum, reaching upto 12.12 ± 0.98 CFU/g fresh roots at the 3rd day of inoculation.ConclusionThe four endophytic bacteria from elephant grass significantly promoted plant growth and biomass yield, alleviated the harmful effects of salt stress on Hybrid Pennisetum. These bacteria have indicated some unique properties that are very valuable for exploiting bio-inoculants aiding in the efforts to establish a sustainable and large-scale feedstock production system for Hybrid Pennisetum, particularly, on the saline marginal lands.Electronic supplementary materialThe online version of this article (doi:10.1186/s13068-016-0592-0) contains supplementary material, which is available to authorized users.

Productive performance of alternative land covers along aridity gradients: Ecological, agronomic and economic perspectives

The replacement of natural vegetation by pastures and extensive crops is generally driven by economic incentives and supported by technology improvements and multiple subsidies. However, towards areas of increasing aridity the productive performance of these replacements may decline from all perspectives – ecological to agronomic to economic – due to intrinsic differences in the structural and physiological adjustment of natural and cultivated vegetation to reduced and fluctuating water availability. We compare natural woody vegetation, perennial C4 pastures and annual crops (maize, soybean and wheat) along a gradient of decreasing precipitation (900–400mm of annual mean) encompassing the current agricultural frontier of the Dry Chaco and Western Espinal ecoregions of South America. We assess (i) aboveground net primary productivity (ANPP) (ii) yields of product dry mass, edible energy and protein outputs and, (iii) economic gross profits and return of investment. We linked climatic with yield data from national statistics, field trials and empiric models, together with productive parameters and market prices obtained from local consultants and economic bulletins. Maize achieved the highest ANPP of all vegetation covers (+42% in average compared to the rest) along the entire precipitation gradient, while the rest of the crops were very similar to natural vegetation. Pastures approached the ANPP of natural vegetation in the humid range, but had the lowest performance below 700mm (−15%). Along the entire precipitation gradient, maize was outstanding in mass and edible energy yield while soybean was so in protein production. Soybean had the highest gross profit per hectare (+50%) and total capital return of investment (+70%). Pastures offered the highest functional capital return of investment (+98%; without fixed capital, infrastructure and land value costs), explaining their relevance at the onset of the deforestation process and the gradual prevalence of crops afterwards. While agronomic and economic incentives for natural vegetation replacement remain strong along the whole aridity gradient, crop choice rather than land use system seem to shape the key ecological process of net primary productivity.

Mycorrhizal Symbiotic Efficiency on C3 and C4 Plants under Salinity Stress - A Meta-Analysis.

A wide range of C3 and C4 plant species could acclimatize and grow under the impact of salinity stress. Symbiotic relationship between plant roots and arbuscular mycorrhizal fungi (AMF) are widespread and are well known to ameliorate the influence of salinity stress on agro-ecosystem. In the present study, we sought to understand the phenomenon of variability on AMF symbiotic relationship on saline stress amelioration in C3 and C4 plants. Thus, the objective was to compare varied mycorrhizal symbiotic relationship between C3 and C4 plants in saline conditions. To accomplish the above mentioned objective, we conducted a random effects models meta-analysis across 60 published studies. An effect size was calculated as the difference in mycorrhizal responses between the AMF inoculated plants and its corresponding control under saline conditions. Responses were compared between (i) identity of AMF species and AMF inoculation, (ii) identity of host plants (C3 vs. C4) and plant functional groups, (iii) soil texture and level of salinity and (iv) experimental condition (greenhouse vs. field). Results indicate that both C3 and C4 plants under saline condition responded positively to AMF inoculation, thereby overcoming the predicted effects of symbiotic efficiency. Although C3 and C4 plants showed positive effects under low (EC < 4 ds/m) and high (>8 ds/m) saline conditions, C3 plants showed significant effects for mycorrhizal inoculation over C4 plants. Among the plant types, C4 annual and perennial plants, C4 herbs and C4 dicot had a significant effect over other counterparts. Between single and mixed AMF inoculants, single inoculants Rhizophagus irregularis had a positive effect on C3 plants whereas Funneliformis mosseae had a positive effect on C4 plants than other species. In all of the observed studies, mycorrhizal inoculation showed positive effects on shoot, root and total biomass, and in nitrogen, phosphorous and potassium (K) uptake. However, it showed negative effects in sodium (Na) uptake in both C3 and C4 plants. This influence, owing to mycorrhizal inoculation, was significantly higher in K uptake in C4 plants. For our analysis, we concluded that AMF-inoculated C4 plants showed more competitive K+ ions uptake than C3 plants. Therefore, maintenance of high cytosolic K+/Na+ ratio is a key feature of plant salt tolerance. Studies on the detailed mechanism for the selective transport of K in C3 and C4 mycorrhizal plants under salt stress is lacking, and this needs to be explored.