It is difficult for hydrocyclone to separate oil-water under the condition of ultra-low inlet flow rate, which commonly exist in the field of energy engineering. Mini-hydrocyclone is an effective technology to solve this problem. The flow field characteristics and oil droplet migration trajectory in the mini-hydrocyclone are the key to guide its efficient work. An innovative mini-hydrocyclone are studied via computational fluid dynamics (CFD) and experiment method. The good separation performance of mini-hydrocyclone for ultra-low inlet flow rate and tiny particle size of oil droplets is verified and analyzed. Furthermore, The distribution of velocity, oil volume fraction and oil migration trajectories in the mini-hydrocyclone are analyzed systematically. The effects of oil droplet size, inlet flow rate and split ratio on the separation performance of mini-hydrocyclone are investigated. The results show that the maximum separation efficiency of the mini-hydrocyclone for 1.0 L/min ultra-low inlet flow rate is 99.98 %, when the split ratio is 30 %, the oil phase volume fraction is 2 %. Moreover, the morphological and distribution of oil core in mini-hydrocyclone are basically consistent between simulation and experiment results, under the conditions of different operating parameters. The minimum error of numerical simulation and experiment results is less than 2.23 %, the accuracy of the numerical simulation method is verified.