The lack of strong geothermal manifestations and limited fumarolic activity has sparked widespread debate about the presence of active magma reservoirs beneath the Wudalianchi volcanic field (WVF). Helium (He) in hydrological systems is sensitive and responsive to the mixture of mantle-derived He, making it an excellent tool for deciphering mantle-derived magmatic processes. Through investigating dissolved He and inorganic carbon (DIC) in shallow groundwater of the WVF, we found that He captures mantle characteristics with R/Ra ratios (R equals to 3He/4He ratios, Ra is atmospheric 3He/4He ratio of 1.39 × 10−6) ranging from 0.07 to 2.27 and the highest proportion of mantle-derived He is 30.38 %. In contrast, DIC shows minimal mantle influence, with low concentrations (1.91–7.39 mmol/L) and depleted δ13C-DIC values ranging from −17.9 ‰ to −13.6 ‰. The calculated mantle 4He fluxes in groundwater are 2–3 orders of magnitude higher than that in stable continents and show the signature of volcanic degassing. The high mantle He fluxes and high upward flow rates suggest the efficient release and transfer of mantle-derived He into shallow groundwater through magma degassing. Magma-aging model effectively constraints the period of magmatic activity to within the last 47 ka. These findings, consistent with seismic noise imaging results, support the presence of magma reservoirs in the upper–middle crust. The absence of magmatic carbon signature in groundwater suggests the decoupling of magmatic He and magmatic CO2. Magmatic CO2 may be removed during ascent, possibly being trapped through dissolution or precipitation processes within the low-resistivity bodies identified at ∼2.5 km depth by magnetotelluric imaging. These findings not only contribute to resolving the controversy surrounding the existence of magma reservoirs beneath the WVF but also have broader implications in guiding the exploration and validation of hidden magmatic systems.