Monocalcium silicate (CS) is a promising carbon-sequestration cementitious material, but experimentally its polymorphs exhibit differing carbonation reactivity. This work utilized first-principles calculations to reveal the intrinsic mechanisms causing carbonation reactivity differences of α-CS, β-CS, and Para-CS by analyzing their crystal structure and electronic structure properties at the atomic scale. The results indicated that the order of carbonation reactivity is α-CS > Para-CS > β-CS. The carbonation of CS minerals depends on Ca-O bond breakage. Electrophilic attack associated with non-bridging oxygen atoms dominates the carbonation reaction. O-2p orbital and Ca-3d state are the main contributors to the electrophilic and nucleophilic reactivity. The crystal and electronic structure synergy enhances α-CS's carbonation reactivity. Analyzing the crystal and electronic structures showed α-CS has the lowest crystal cohesion and is structurally least stable due to its 3-member silica rings and co-edge linkage with Ca polyhedra. The larger volumes, lower bond order, and longer bond length of Ca-O polyhedra in α-CS cause weaker Ca-O bonds and more and easier Ca2+ dissolution than β- and Para- CS. The type and number of electrophilic active O sites in α-CS also facilitate Ca-O bond breaking and CO2 capture. These insightful revelations offer a systematic and efficient approach to identifying minerals demonstrating exceptional carbonation reactivity.