Native Dogs Research Articles

Characterization, registration and gazette notification

The first animal to be domesticated by the man was dog which probably occurred at least 14,000 years ago- the animals being used for hunting and as watchdogs. In India many exotic dog breeds (mainly German Shepherd, Labrador, Doberman, Pomeranian etc) are kept as pet but little emphasis has been given to the native dog breeds. Some Indian breeds of dogs reported in India are Caravan Hound, Combai, Chippiparai, Rajapalayam, Rampur Hound, Kanni, Mudhol Hound, Indian Mastiff (Bulli), Himalayan sheep dog, Bhutia dogs, Bhakarwal dogs etc. ICAR-NBAGR has developed methodology for characterization of dog breeds of Indian through systematic survey in the area of its distribution along with Breed Descriptors format for dog breeds. Phenotypic characterization of two indigenous dog breeds viz Rajapalayam and Chippiparai were completed by ICAR-NBAGR. Rajapalayam and Chippiparai dogs are exclusively reared for guarding the farm and farm houses. Chippiparai dogs are even given to brides during marriage. There is huge demand for the pups of these dog breeds. State of Karnataka has also completed the characterization of Mudhol hound breed. All three dog have been registered by ICAR & Gazette notified by Govt. of India.

A Nonsynonymous Substitution of Lhx3 Leads to Changes in Body Size in Dogs and Mice.

Lhx3 is a LIM-homeodomain transcription factor that affects body size in mammals by regulating the secretion of pituitary hormones. Akita, Shiba Inu, and Mame Shiba Inu dogs are Japanese native dog breeds that have different body sizes. To determine whether Lhx3 plays a role in the differing body sizes of these three dog breeds, we sequenced the Lhx3 gene in the three breeds, which led to the identification of an SNP in codon 280 (S280N) associated with body size. The allele frequency at this SNP differed significantly between the large Akita and the two kinds of smaller Shiba dogs. To validate the function of this SNP on body size, we introduced this change into the Lhx3 gene of mice. Homozygous mutant mice (S279N+/+) were found to have significantly increased body lengths and weights compared to heterozygous mutant (S279N+/-) and wild-type (S279N-/-) mice several weeks after weaning. These results demonstrate that a nonsynonymous substitution in Lhx3 plays an important role in regulating body size in mammals.

Origin and spatial population structure of Malagasy native chickens based on mitochondrial DNA

Since Malagasy human culture became established in a multi-layered way by genetic admixture of Austronesian (Indonesia), Bantu (East Africa) and West Asian populations, the Malagasy native livestock should also have originated from these regions. While recent genetic studies revealed that Malagasy native dogs and goats were propagated from Africa, the origin of Malagasy native chickens is still controversial. Here, we conducted a phylogeographic analysis of the native chickens, focusing on the historical relationships among the Indian Ocean rim countries and based on mitochondrial D-loop sequences. Although previous work suggested that the rare Haplogroup D occurs with high frequencies in Island Southeast Asia–Pacific, East Africa and Madagascar, the major mitochondrial lineage in Malagasy populations is actually not Haplogroup D but the Sub-haplogroup C2, which is also observed in East Africa, North Africa, India and West Asia. We demonstrate that the Malagasy native chickens were propagated directly from West Asia (including India and North Africa), and not via East Africa. Furthermore, they display clear genetic differentiation within Madagascar, separated into the Highland and Lowland regions as seen in the human genomic landscape on this island. Our findings provide new insights for better understanding the intercommunion of material/non-material cultures within and around Madagascar.

Dingoes, companions in life and death: The significance of archaeological canid burial practices in Australia.

The dingo, also known as the Australian native dog, was introduced in the late Holocene. Dingoes were primarily wild animals but a number resided in Aboriginal people's camps. Traditionally, these individuals were taken from wild litters before weaning and raised by Aboriginal people. It is generally believed that these dingoes were not directly provided for, and upon sexual maturity, returned to reproduce in the wild. However, some died while in the company of people and, were buried in occupation sites. This Australian practice parallels the burial of domestic dogs in many regions of the Asia-Pacific and beyond but has attracted very little research. We explore the historical and archaeological evidence for dingo burial, examining its different forms, chronological and geographic distribution, and cultural significance. Dingoes were usually buried in the same manner as Aboriginal community members and often in areas used for human burial, sometimes alongside people. This practice probably occurred from the time of their introduction until soon after European colonisation. We present a case study of dingo burials from Curracurrang Rockshelter (NSW) which provides insights into the lives of ancient tame dingoes, and suggests that domestication and genetic continuity between successive camp-dwelling generations may have occurred prior to European contact.

Multiple Origins and Genomic Basis of Complex Traits in Sighthounds.

Sighthounds, a distinctive group of hounds comprising numerous breeds, have their origins rooted in ancient artificial selection of dogs. In this study, we performed genome sequencing for 123 sighthounds, including one breed from Africa, six breeds from Europe, two breeds from Russia, and four breeds and 12 village dogs from the Middle East. We gathered public genome data of five sighthounds and 98 other dogs as well as 31 gray wolves to pinpoint the origin and genes influencing the morphology of the sighthound genome. Population genomic analysis suggested that sighthounds originated from native dogs independently and were comprehensively admixed among breeds, supporting the multiple origins hypothesis of sighthounds. An additional 67 published ancient wolf genomes were added for gene flow detection. Results showed dramatic admixture of ancient wolves in African sighthounds, even more than with modern wolves. Whole-genome scan analysis identified 17 positively selected genes (PSGs) in the African population, 27 PSGs in the European population, and 54 PSGs in the Middle Eastern population. None of the PSGs overlapped in the three populations. Pooled PSGs of the three populations were significantly enriched in "regulation of release of sequestered calcium ion into cytosol" (gene ontology: 0051279), which is related to blood circulation and heart contraction. In addition, ESR1, JAK2, ADRB1, PRKCE, and CAMK2D were under positive selection in all three selected groups. This suggests that different PSGs in the same pathway contributed to the similar phenotype of sighthounds. We identified an ESR1 mutation (chr1: g.42,177,149 T > C) in the transcription factor (TF) binding site of Stat5a and a JAK2 mutation (chr1: g.93,277,007 T > A) in the TF binding site of Sox5. Functional experiments confirmed that the ESR1 and JAK2 mutation reduced their expression. Our results provide new insights into the domestication history and genomic basis of sighthounds.

Origin and population structure of native dog breeds in the Korean peninsula and East Asia

To study the ancestry and phylogenetic relationships of native Korean dog breeds to other Asian dog populations, we analyzed nucleotide variations in whole-genome sequences of 205 canid individuals. Sapsaree, Northern Chinese indigenous dog, and Tibetan Mastiff were largely related to West Eurasian ancestry. Jindo, Donggyeongi, Shiba, Southern Chinese indigenous (SCHI), Vietnamese indigenous dogs (VIET), and Indonesian indigenous dogs were related to Southeast and East Asian ancestry. Among East Asian dog breeds, Sapsaree presented the highest haplotype sharing with German Shepherds, indicating ancient admixture of European ancestry to modern East Asian dog breeds. SCHI showed greater haplotype sharing with New Guinea singing dogs, VIET, and Jindo than with other Asian breeds. The predicted divergence time of East Asian populations from their common ancestor was approximately 2,000 to 11,000 years ago. Our results expand understanding of the genetic history of dogs in the Korean peninsula to the Asian continent and Oceanic region.

Constraints Perceived by the Kennel Owners in Rearing of Indigenous Dog Breeds (Rajapalayam, Kanni and Chippiparai Dog) in Southern Districts of Tamil Nadu

The increased demand for indigenous native dog’s breeds like Rajapalayam, Kanni and Chippiparai, leading to flourishing of more kennels in and around the breeding tract of the above breeds. The breeders without an experience in dog breeding are also involved in this dog breeding business and some of them face number of problems in running the business and meet with fiscal loss. Individuals who run the kennel with successful managemental practices and marketing tactics can only survive in this business. Considering the above problems in mind, a study was carried out to list out the major constraints perceived by the kennel owners of the indigenous dog breeds so as to sketch out a package of practices in indigenous dog breeding business. A study was carried out to identify the major constraints perceived by the dog breeders of the above indigenous dog breeds. The data were collected by pre-tested interview scheme from 39 kennel owners randomly selected from the breeding tract viz Virudhunagar, Tirunelveli and Thoothukudi districts of Tamil Nadu. Prime constraints listed in the previous study were used to get response form the kennel owners. Kennel owners with more than five year of experience and maintaining more than 25 adult breedable dogs were interviewed. The constraints perceived by the kennel owners were collected and Garett’s ranking technique was followed to rank the constraints perceived by them in their business. The study revealed that, majority of the dog breeders reported that, the unavailability of timely veterinary care (83.80%) is the major problem in dog breeding business followed by high cost involved in establishment of kennel (70.15%), difficulty in getting KCI registration for their dog (58.23%), unavailability of Vaccine (56%), frequent disease problems (50%), unethical business tactics by the competitors (48.33), inbreeding and inherited diseases (45%), pup Mortality(40%), poor breeding performance of dogs (35%), low demand and low price for the pups (28%) and unaware about scientific management (17%).

Phylogeographic and population genetic structure of hound-like native dogs of the Mediterranean Basin

The dog was probably the first domesticated animal. Despite extensive archaeological and genetic investigations, the origin and the evolution of the extant dogs are still being debated. Dog breeds that have over time been selected for hunting share common ancestral traits. This study represents the first comprehensive attempt to survey at the genomic and mitochondrial level eight hound-like dogs breeds indigenous to the Mediterranean Basin to determine if they share common ancient origins.Results from the microsatellite analysis indicate that all the dog populations have a low inbreeding value.The Kelb tal-Fenek has a high divergence from the current Egyptian street population, however there is not enough evidence from this study to exclude completely the potential of an ancient common relationship. Overall, the mitochondrial results indicate high frequencies of haplogroups A and B and a low representation of haplogroup C, while only one Egyptian dog could be assigned to haplogroup D. Results reveal identities and shared clades, suggesting the conservation of ancient European mitotypes in the Mediterranean hound-like breeds, especially in the Egyptian population.Although none of the dog populations/breeds participating in this study indicate to be direct descendants of the Egyptian dogs, they still have a very close morphologically resemblance to those iconic Egyptian dogs often depicted in ancient art forms and share some genetic links with the current Egyptian population. Further research is required with other markers such us complete mitogenomes and SNP panels to confirm the complex history of the Mediterranean dogs involved in this study.

Đặc điểm thị giác và thính giác của chó bản địa Sông Mã

Evaluation of the visual and auditory abilities of the Song Ma native dog breed. 30 individuals were monitored from 3 to 12 months of age with a total of 600 tests performed, in which 300 tests determined the distance of sight and 300 tests determined the hearing distance of Song Ma dogs. The tests were carried out at the kennel of the Joint Vietnam-Russia Tropical Science and Technology Research Centre, Yen Binh Commune, Thach That District, Hanoi City, in daytime conditions: not too sunny, no rain, light wind. At different ages, the visual and auditory abilities of Song Ma native dogs are also different and increase with age (p ≤ 0,05). These abilities become stable at 11, 12 months of age. For the Song Ma breed, the average farthest seeing distance is 245.60 m, the average farthest hearing distance is 702.57 m. There was no statistically significant difference between male and female individuals of this breed (p > 0,05).

Evaluation of the Behavior of Some Native Dogs in Vietnam to Determine Their Suitability as Detector Dogs

In dogs of native breeds (“Hmong,” “Phu Quoc,” and “Zang Soi”), the features of behavior pre-adapted to interaction with humans and formed in the process of directional selection have been revealed. Behavioral characteristics (contactiveness, activity, playfulness, reaction to the unexpected appearance of an unfamiliar object, and abrupt sounds) were used to evaluate the dogs’ suitability for training for use as service detector dogs. It was shown that native dogs even without directional selection can show high indices of activity and contact with a human, similar to those found by the authors earlier for European breeds. Indicators of playfulness and reaction to unfamiliar objects and sharp sounds are formed only in the process of directional selection. The “Zang Soi” dog recommended for breeding and use as detection dogs turned out to be the closest to the European breeds in terms of activity and contactiveness indices.

Tracing the Origin of the RSPO2 Long-Hair Allele and Epistatic Interaction between FGF5 and RSPO2 in Sapsaree Dog.

Genetic analysis of the hair-length of Sapsaree dogs, a Korean native dog breed, showed a dominant mode of inheritance for long hair. Genome-Wide Association Study (GWAS) analysis and subsequent Mendelian segregation analysis revealed an association between OXR1, RSPO2, and PKHD1L1 on chromosome 13 (CFA13). We identified the previously reported 167 bp insertion in RSPO2 3’ untranslated region as a causative mutation for hair length variations. The analysis of 118 dog breeds and wolves revealed the selection signature on CFA13 in long-haired breeds. Haplotype analysis showed the association of only a few specific haplotypes to the breeds carrying the 167 bp insertion. The genetic diversity in the neighboring region linked to the insertion was higher in Sapsarees than in other Asian and European dog breeds carrying the same variation, suggesting an older history of its insertion in the Sapsaree genome than in that of the other breeds analyzed in this study. Our results show that the RSPO2 3’ UTR insertion is responsible for not only the furnishing phenotype but also determining the hair length of the entire body depending on the genetic background, suggesting an epistatic interaction between FGF5 and RSPO2 influencing the hair-length phenotype in dogs.

Long-term impact of a ten-year intervention program on human and canine Trypanosoma cruzi infection in the Argentine Chaco.

BackgroundInterruption of domestic vector-borne transmission of Trypanosoma cruzi is still an unmet goal in several American countries. In 2007 we launched a long-term intervention program aimed to suppress house infestation with the main domestic vector in southern South America (Triatoma infestans) and domestic transmission in Pampa del Indio, a resource-constrained, hyperendemic municipality with 1446 rural houses inhabited by Creole and indigenous people, in the Argentine Chaco ecoregion. Here, we assessed whether the 10-year insecticide-based program combined with community mobilization blocked vector-borne domestic transmission of T. cruzi to humans and dogs.MethodsWe carried out two municipality-wide, cross-sectional serosurveys of humans and dogs (considered sentinel animals) during 2016–2017 to compare with baseline data. We used a risk-stratified random sampling design to select 273 study houses; 410 people from 180 households and 492 dogs from 151 houses were examined for antibodies to T. cruzi using at least two serological methods.ResultsThe seroprevalence of T. cruzi in children aged <16 years was 2.5% in 2017 (i.e., 4- to 11-fold lower than before interventions). The mean annual force of child infection (λ) sharply decreased from 2.18 to 0.34 per 100 person-years in 2017. One of 102 children born after interventions was seropositive for T. cruzi; he had lifetime residence in an apparently uninfested house, no outside travel history, and his mother was T. cruzi-seropositive. No incident case was detected among 114 seronegative people of all ages re-examined serologically. Dog seroprevalence was 3.05%. Among native dogs, λ in 2016 (1.21 per 100 dog-years) was 5 times lower than at program onset. Six native adult dogs born after interventions and with stable lifetime residence were T. cruzi-seropositive: three had exposure to T. infestans at their houses and one was an incident case.ConclusionsThese results support the interruption of vector-borne transmission of T. cruzi to humans in rural Pampa del Indio. Congenital transmission was the most likely source of the only seropositive child born after interventions. Residual transmission to dogs was likely related to transient infestations and other transmission routes. Sustained vector control supplemented with human chemotherapy can lead to a substantial reduction of Chagas disease transmission in the Argentine Chaco.

Most Dogs Are Not NATIVE Dogs.

Studies of dogs have proliferated among canine scientists, aided in part by the logistical convenience of working with owned animals whose care is handled by others. These pet dogs are unlike most dogs that have lived in contemporary or prehistoric settings. In particular, many of the dogs studied by canine scientists are NATIVE dogs: (1) neutered, (2) alimented, (3) trained, (4) isolated, (5) vaccinated, and (6) engineered. The distinct genotypes and unusual environments of NATIVE dogs stand in contrast to the characteristics of dogs who have adapted to lives in other human communities and settings. For a holistic perspective on the evolution of dogs, it is helpful to study dogs in environments that share features of the settings in which dogs evolved.

The Prevalence of Gastrointestinal Parasites in Native Dogs in Palestine.

Background:Dogs play an important role in transmission of parasites and zoonotic diseases, especially in developing countries. We aimed to investigate the prevalence of internal parasites in stray and pet dogs in Palestine.Methods:Fecal samples were collected during the period between Jan to May 2019. A total of 150 fecal samples were collected and tested for parasites using sedimentation and flotation techniques. The targeted dogs were both pet dogs and stray dogs and were grouped according to gender and age.Results:Although there was no significant difference in infestation between males and females, the prevalence rate of infestation in males was 63.1% compared to females 72.4%. Dogs of ages under one year had similar rate of infestation compared to older dogs with a rate of 67.3% and 67.4% respectively. Infestations were significantly higher (P<0.05) in stray dogs 81.4% compared to pet dogs 48.4%. The highest infestation rate was with Toxocara canis 46.0% followed by Dipylidium caninum 23.0%, Echinococcus spp. 14.0% ,Isosopora canis 9.0%, Ancylostoma caninum 8.0%, Giarda spp. 5.0%, Strongyloides spp. 4.0%, Trichuris vulpis 3.0%, and Cryptosporidium spp. 3.0%.Conclusion:Local dogs in Palestine, especially stray dogs, are infested with different types of intestinal parasites that may cause many common and non-common diseases to humans. To prevent the spread of these parasites, future public health should be proposed and applied by authorities to achieve a healthy status of the residents in the country. Health awareness spread among people about the seriousness of the diseases transmitted by dogs must also be activated.

Variability in pomological traits of dog rose (Rosa canina L.) under the ecological conditions of the Republic of Croatia

Wild or dog rose (Rosa canina L.) is a successful colonizer of various habitats and different soil types and is widely distributed across the Republic of Croatia. In this research, in order to estimate pomological variability in native dog rose populations, four genotypes from four locations in different geographic areas of Croatia were selected and sampled. The genotypes selected were: genotype G1, originating from the continental part of Croatia (Pitomača); genotypes G2 and G3, originating from the Mediterranean part of Croatia (Kukurini and Posedarje, respectively); and genotype G4, originating from the upland part of Croatia (Gračac). Fruits were harvested at optimum harvest dates in 2010 and 2012. Genotype had a significant effect on each studied pomological trait (length, width, geometric mean diameter, sphericity, volume, surface, shape index, weight, flesh weight, flesh ratio and total dry matter content), while year significantly affected all parameters except sphericity and shape index. The highest values for most pomological traits in 2010 and 2012 were found in the G4 and G3 genotypes, respectively. This research highlighted the existence of high variability in pomological traits among dog rose populations in Croatia, which emphasizes the possibility of further breeding and cultivation.

Whole genome resequencing of the Iranian native dogs and wolves to unravel variome during dog domestication

BackgroundAdvances in genome technology have simplified a new comprehension of the genetic and historical processes crucial to rapid phenotypic evolution under domestication. To get new insight into the genetic basis of the dog domestication process, we conducted whole-genome sequence analysis of three wolves and three dogs from Iran which covers the eastern part of the Fertile Crescent located in Southwest Asia where the independent domestication of most of the plants and animals has been documented and also high haplotype sharing between wolves and dog breeds has been reported.ResultsHigher diversity was found within the wolf genome compared with the dog genome. A total number of 12.45 million SNPs were detected in all individuals (10.45 and 7.82 million SNPs were identified for all the studied wolves and dogs, respectively) and a total number of 3.49 million small Indels were detected in all individuals (3.11 and 2.24 million small Indels were identified for all the studied wolves and dogs, respectively). A total of 10,571 copy number variation regions (CNVRs) were detected across the 6 individual genomes, covering 154.65 Mb, or 6.41%, of the reference genome (canFam3.1). Further analysis showed that the distribution of deleterious variants in the dog genome is higher than the wolf genome. Also, genomic annotation results from intron and intergenic regions showed that the proportion of variations in the wolf genome is higher than that in the dog genome, while the proportion of the coding sequences and 3′-UTR in the dog genome is higher than that in the wolf genome. The genes related to the olfactory and immune systems were enriched in the set of the structural variants (SVs) identified in this work.ConclusionsOur results showed more deleterious mutations and coding sequence variants in the domestic dog genome than those in wolf genome. By providing the first Iranian dog and wolf variome map, our findings contribute to understanding the genetic architecture of the dog domestication.

Can Dogs be Racist? The Colonial Legacies of Racialized Dogs in Kenya and Zambia

Abstract Can dogs be racist? Posing this question may seem odd and at worst, unhelpfully provocative at a time when the discourse of ‘colour-blindness’ is so pervasive. Yet the idea of ‘racist dogs’ remains salient within the post-settler societies of eastern and southern Africa, where dogs have been an integral if overlooked tool of colonial practices of racialization. This article traces the colonial demarcation of ‘native dogs’ – juxtaposed to white settlers’ ‘pet’ dogs – to understand how racial categories were imposed on domesticated animals, and how these racialized animals were then colonized through rabies legislation. Although the formal racialization of dogs ended with the dawn of political decolonization in the early 1960s, dogs continued to be co-opted for postcolonial racial discourse. Dogs were in a prominent position in postcolonial society due to their prevalence in the security arrangements of white homes as well as in the security forces of white supremacist Rhodesia and apartheid South Africa. The intensity of the relationship between white minorities, their canine pets and the surrounding African population points toward the uncomfortable conclusion that in the heightened racial environments of decolonizing settler Africa, dogs could be made to be racist.

Evaluation of canine leishmaniosis vaccine CaniLeish® under field conditions in native dog populations from an endemic Mediterranean area–A randomized controlled trial

Dog vaccination is considered an effective way of reducing Leishmania infantum infection incidence in the canine population, as well as its transmission to humans. However, the use of partially effective vaccines can have the detrimental effect of “masking” vaccinated asymptomatic carriers, capable of harbouring the parasite and transmitting it to naïve individuals. After eight years on the European market, few studies have been released on CaniLeish® vaccine safety and efficacy. The present study, a one-year randomized CaniLeish® vaccine field trial, was performed in a canine leishmaniosis endemic area and included animals selected from a native dog population (n = 168). No severe adverse reactions were observed in vaccinated dogs (n = 85). Cases of active L. infantum infection were detected by serological, molecular and clinical follow-up of dogs. One-year post-vaccination, no differences in number or severity of L. infantum active infections were observed between study groups (n = 4 in each group). Vaccine-induced cellular immunity, assessed through interferon-γ quantification, showed significantly higher levels of this cytokine one-month post-vaccination in the vaccine group (p < 0.001), but no differences were observed after nine months between trial groups (p = 0.078). These results fail to support the reported CaniLeish® efficacy in the prevention of active L. infantum infection in dogs from endemic areas and naturally exposed to the parasite.

Morphological and Genetic Characteristics of Zerdava, A Native Turkish Dog Breed

Morphological and Genetic Characteristics of Zerdava, A Native Turkish Dog Breed

Genetic diversity and population structure of the Sapsaree, a native Korean dog breed

BackgroundThe Sapsaree is a breed of dog (Canis familiaris) native to Korea, which became perilously close to extinction in the mid-1980s. However, with systematic genetic conservation and restoration efforts, this breed was rescued from extinction and population sizes have been gradually increasing over the past few decades. The aim of this study was to ascertain novel information about the genetic diversity, population structure, and demographic history of the Sapsaree breed using genome-wide single nucleotide polymorphism data. We characterized the genetic profile of the Sapsaree breed by comparison with seven foreign dog breeds with similar morphologies to estimate genetic differentiation within and among these breeds.ResultsThe results suggest that Sapsarees have higher genetic variance compared with the other breeds analyzed. The majority of the Sapsarees in this study share a discrete genetic pattern, although some individuals were slightly different, possibly as a consequence of the recent restoration process. Concordant results from analyses of linkage disequilibrium, effective population size, genetic diversity, and population structural analyses illustrate a relationship among the Sapsaree and the Tibetan breeds Tibetan terrier and Lhasa Apso, and a small genetic introgression from European breeds. The effective population size of the Sapsaree has contracted dramatically over the past generations, and is currently insufficient to maintain long-term viability of the breed’s genetic diversity.ConclusionsThis study provides novel insights regarding the genetic diversity and population structure of the native Korean dog breed Sapsaree. Our results suggest the importance of a strategic and systematic approach to ensure the genetic diversity and the authenticity of the Sapsaree breed.