Because of the massive discharge of nitrogenous wastewater, the eutrophication of a water body is becoming increasingly serious, and how to effectively remove nitrogen from this wastewater remains an urgent problem to be solved. In this study, due to disadvantages in the traditional biological nitrogen removal process, such as complex and long procedures, high energy consumption, weak impact resistance, and N2O release, the nitrogen removal theory by heterotrophic nitrification was further analyzed by discussing the physiological-biochemical, heterotrophic nitrification-aerobic denitrification, and N2O production characteristics of a high-efficiency heterotrophic nitrifying bacteria Pseudomonas aeruginosa YL. Results show that the strain YL had an eminent heterotrophic nitrification and aerobic denitrification ability, and NH4+-N, NO2--N, and NO3--N with concentration of 100 mg·L-1 could be completely removed during the 24-hour incubation period. There was almost no intermediate product in the process of heterotrophic nitrification, however when NO3--N was used as nitrogen source, the accumulation of NO2--N reached 25.55 mg·L-1. Meanwhile, the successful expression of denitrification genes napA, nirK, and nosZ further confirmed the aerobic denitrification ability of strain YL. Gaseous nitrogen products accounted for about 30%-40% of removed TN in the heterotrophic nitrification-aerobic denitrification process by strain YL, and N2 was the main denitrification product. When NH4+-N, NO2--N, and NO3--N were used as the sole nitrogen source, N2 production amounted to 3.46, 3.49, and 3.36 mg, respectively. In contrast, only small amounts of N2O were produced in the denitrification process by strain YL, and the total amount was 6.63 μg when NH4+-N was the nitrogen source, which was much lower than in the cases of NO2--N and NO3--N as the sole nitrogen source. In addition, high C/N, low pH, high temperature, high NH4+-N, and high NO2--N conditions could result in more N2O generation. Nevertheless, most environmental factors had little effect on N2O production of strain YL, and the maximum N2O production was significantly lower than that of short-cut nitrification system and autotrophic nitrification system. These results demonstrated that strain YL exhibited excellent abilities of nitrogen removal, N2O emission control, and tolerance to environmental conditions, and could be an effective candidate for treating wastewater without secondary air pollution.