Myxozoan Parasite Research Articles

Some pathophysiological insights into ovarian infestation by Myxobolus sp. (Myxozoa: Myxosporea) in Clarias gariepinus (Clariids: Silurids) from Bénin (West Africa).

Mature female specimens of the catfish Clarias gariepinus originating from Ouémé River (Benin) were investigated into ovarian myxozoan parasites. Spores of Myxobolus sp. (Myxozoa: Myxosporea) were found encrusted in the whitish color oocytes which present fat dot aspect in the gonads. The pathological investigation by electron microscopy revealed that maturation and multiplication of spores induced lytic action, deformation and dysfunction of the oocyte internal structures. No host inflammatory reaction was observed, while yolk, lipid, mitochondria, and other oocyte components were degenerated inducing empty area in the oocyte and could lead to castration in case of wide infestation. The mean prevalence was 19.79%. No significant difference was observed within seasonal prevalence (χ(2) = 1.771; df = 3; p > 0.05). Though the host length classes ranging from 35 to 39 cm and 40 to 45 cm were more infected, difference was not significant (χ(2) = 2.273; df = 4; p > 0.05) within them. The spores are ovoid in shape with two polar capsules which are equal in size, pyriform, and converging in anterior part of spore with four to five polar filament turns. Spore body are (11.47 ± 0.67) × (8.19 ± 0.52) μm length by width while polar capsule size are (4.24 ± 0.25) × (3.07 ± 0.28) μm and located in the first third portion of the spore. The molecular approaches are still running for accurate identification of this parasite.

First report of the myxozoan parasite Myxobolus episquamalis infecting grey mullet (Mugil cephalus) from New Zealand

In November 2013 the Animal Health Laboratory, Ministry for Primary Industries, New Zealand, received a report of a grey mullet (Mugil cephalus) presenting reddish-white granular lesions across its body. Gross pathological examination revealed cyst-like lesions on the distal portion of the scales and proximal part of the fins. Giemsa-stained wet preparations of these lesions presumptively identified spores as Myxobolus sp. DNA sequencing of the 18S rRNA gene further identified these spores as Myxobolus episquamalis. This is the first report of Myxobolus episquamalis infecting M. cephalus from New Zealand.

First microsatellite loci of the myxozoan parasite Tetracapsuloides bryosalmonae, the causative agent of proliferative kidney disease (PKD).

Proliferative kidney disease (PKD) caused by the myxozoan parasite Tetracapsuloides bryosalmonae is a severe parasitic disease of salmonid fish. Estimates of genetic variation in parasite populations across Europe are currently lacking. We developed the first polymorphic microsatellite markers for T. bryosalmonae using Illumina MiSeq sequence data derived from genomic DNA. Twelve polymorphic loci were identified from 24 tested loci. Allelic variation was low at most loci, ranging from 2 to 6 (average 3.0). The markers developed here are expected to be useful in future genetic studies of T. bryosalmonae, aimed at further understanding the dispersal of the parasite, host-parasite relationships and the epidemiology of PKD.

Genetic relatedness provides support for a species complex of myxosporeans infecting the Indian major carp, Labeo rohita

Myxozoans are an economically important group of microscopic metazoan parasites of fish. The myxozoan species Thelohanellus filli infects commercially important freshwater fish both in wild and in cultured habitat. This parasite causes gill hemorrhagic disease and significant damage to the respiratory surface of the infected fish. In the present study, the 18S rDNA gene sequence of morphologically identified T. filli infecting the gill lamellae of the Indian major carp, Labeo rohita, was characterized. This revealed that we are actually dealing with a species complex containing T. bifurcata, T. jiroveci and T. seni. Phylogenetically, T. filli clustered with other myxozoan parasites, with the species most closely related to T. filli having 96 to 97% sequence similarity. The intraspecific variation demonstrated in this study points towards the importance of newer approaches to facilitate reassessment of taxa and detecting species complexes and cryptic species.

Parental genetic diversity of brown trout (Salmo trutta m. fario) brood stock affects offspring susceptibility to whirling disease.

BackgroundWhirling disease, caused by the myxozoan parasite Myxobolus cerebralis, has high economical and ecological importance worldwide. Susceptibility to the disease varies considerably among salmonid species. In brown trout (Salmo trutta) the infection is usually subclinical with low mortality, which increases the risk of parasite dissemination, especially when farm fish are used for stocking natural habitats. The influence of intraspecific genetic differences (especially the level of homozygosity) on susceptibility is unknown. Therefore, we examined the possible correlations between parental genetic diversity and offspring susceptibility of brown trout stocks to whirling disease.MethodsTwo brown trout brood stocks from a German and a Hungarian fish farm were genetically characterized using microsatellite and lineage-specific genetic markers. The individual inbreeding coefficient f and pairwise relatedness factor r were estimated based on eight microsatellite markers. Brood stock populations were divided into groups according to low and high f and r value estimates and subjected to selective fertilization. The offspring from these separate groups were exposed to M. cerebralis actinospores, and the infection prevalence and intensity was measured and statistically analysed.ResultsThe analysis of phylogeographic lineage heritage revealed high heterogeneity in the Hungarian brood stock since > 50% of individuals were Atlantic-Danubian hybrids, while only pure Atlantic-descending specimens were detected in the German population. Based on fmsat and rmsat estimations, classified non-inbred (NIB), inbred (IB) and a group of closely related fish (REL) were created. The susceptibility of their offspring varied considerably. Although there was no significant difference in the prevalence of M. cerebralis infection, the mean intensity of infection differed significantly between NIB and IB groups. In REL and IB groups, a high variability was observed in infection intensity. No external clinical signs were observed in the exposed brown trout groups.ConclusionsOur findings indicate that the allelic diversity of brown trout brood stock may constitute a significant factor in disease susceptibility, i.e. the intensity of parasite infection in the subsequent generation.

RNA-seq analysis reveals significant transcriptome changes in turbot (Scophthalmus maximus) suffering severe enteromyxosis.

BackgroundEnteromyxosis caused by the intestinal myxozoan parasite Enteromyxum scophthalmi is a serious threat for turbot (Scophthalmus maximus, L.) aquaculture, causing severe catarrhal enteritis leading to a cachectic syndrome, with no therapeutic options available. There are still many aspects of host-parasite interaction and disease pathogenesis that are yet to be elucidated, and to date, no analysis of the transcriptomic changes induced by E. scophthalmi in turbot organs has been conducted. In this study, RNA-seq technology was applied to head kidney, spleen and pyloric caeca of severely infected turbot with the aim of furthering our understanding of the pathogenetic mechanisms and turbot immune response against enteromyxosis.ResultsA huge amount of information was generated with more than 23,000 identified genes in the three organs, amongst which 4,762 were differently expressed (DE) between infected and control fish. Associate gene functions were studied based on gene ontology terms and available literature, and the most interesting DE genes were classified into five categories: 1) immune and defence response; 2) apoptosis and cell proliferation; 3) iron metabolism and erythropoiesis; 4) cytoskeleton and extracellular matrix and 5) metabolism and digestive function. The analysis of down-regulated genes of the first category revealed evidences of a connexion failure between innate and adaptive immune response, especially represented by a high number of DE interferon-related genes in the three organs. Furthermore, we found an intense activation of local immune response at intestinal level that appeared exacerbated, whereas in kidney and spleen genes involved in adaptive immune response were mainly down-regulated. The apoptotic machinery was only clearly activated in pyloric caeca, while kidney and spleen showed a marked depression of genes related to erythropoiesis, probably related to disorders in iron homeostasis. The genetic signature of the causes and consequences of cachexia was also demonstrated by the down-regulation of the genes encoding structural proteins and those involved in the digestive metabolism.ConclusionsThis transcriptomic study has enabled us to gain a better understanding of the pathogenesis of enteromyxosis and identify a large number of DE target genes that bring us closer to the development of strategies designed to effectively combat this pathogen.Electronic supplementary materialThe online version of this article (doi:10.1186/1471-2164-15-1149) contains supplementary material, which is available to authorized users.

Transmission and Persistence ofCeratonova shastaGenotypes in Chinook Salmon

Ceratonova shasta is a myxozoan parasite of salmon and trout transmitted by waterborne actinospores. Based on DNA sequence data and host specificity, 4 distinct parasite genotypes are recognized. Genotypes I and II are common in the lower reaches of the Klamath River, Oregon-California, but only infection by genotype I causes mortality in Chinook salmon. We conducted sentinel fish exposures and determined genotype composition in river water during exposure, and in fish gills, intestine, and tank water post-exposure to determine whether: (1) transmission of parasites having different genotypes is host-specific and (2) all transmitted genotypes persist in the host through to release as waterborne stages. Initial parasite transmission to the fish host appears indiscriminant, since we detected both genotypes I and II in 83.6% of the fish gills sampled. However, only genotype I was detected in fish that succumbed to infection, while both genotypes persisted in fish that survived. Persistence was likely dependent on exposure dose, initial infection type (mixed or single) and infection outcome (mortality or survival). The transmission of both genotypes to a majority of Chinook salmon and the persistence of multiple genotypes raises questions about how infection with mixed genotypes could result in within-host interactions that affect disease severity.

New observations on Myxozoa of the goldline sea bream Sarpa salpa L. 1758 (Teleostei : Sparidae) from the Mediterranean coast of Tunisia.

A member of the Sparidae family, the goldline sea bream Sarpa salpa (Linnaeus, 1758) collected from the Gulf of Tunis and the Bay of Bizerte in Northeast Tunisia, Western Mediterranean, were examined for the myxozoan parasites. During the parasitological exposure, a total of 7 myxosporean are found including 6 coelozoic species belong to the genus Ceratomyxa Thélohan, 1892 infected the gallbladder of their host of which 3 known species have been previously described, C. arcuata Thélohan, 1892, C. pallida Thélohan, 1895 and C. herouardi Georgévitch, 1916 and 3 species seem different in morphology to Ceratomyxa spp already known from Mediterranean Sea or from other localities in the wide world. These species are Ceratomyxa sp. 1, Ceratomyxa sp. 2 and Ceratomyxa sp. 3. Only one histozoic species belongs to the genus Henneguya Thélohan, 1892, Henneguya sp. identified for the first time infecting the mesentery vessels of S. salpa. The myxosporean parasite C. arcuata Thélohan, 1892 is reported for the first time in Tunisian waters from the goldline sea bream which represents as new host records. In addition to the Monoparasitism, the phenomenon of Polyparasitism was observed between the current species in both sampling sites with two types: Biparasitism and Triparasitism. The most frequent Polyparasitism was a Biparasitism-type between C. herouardi and C. pallida with frequency 16.97%. For all the species, no serious pathogenic changes have been recorded in the host organ or in the outward appearance of the fish. Morphological features, site of infection into the host, parasite prevalence and mean intensity of each myxosporean found during this survey are determined and their taxonomic affinities to other species are discussed.

The genome of the myxosporean Thelohanellus kitauei shows adaptations to nutrient acquisition within its fish host.

Members of Myxozoa, a parasitic metazoan taxon, have considerable detrimental effects on fish hosts and also have been associated with human food-borne illness. Little is known about their biology and metabolism. Analysis of the genome of Thelohanellus kitauei and comparative analysis with genomes of its two free-living cnidarian relatives revealed that T. kitauei has adapted to parasitism, as indicated by the streamlined metabolic repertoire and the tendency toward anabolism rather than catabolism. Thelohanellus kitauei mainly secretes proteases and protease inhibitors for nutrient digestion (parasite invasion), and depends on endocytosis (mainly low-density lipoprotein receptors-mediated type) and secondary carriers for nutrient absorption. Absence of both classic and complementary anaerobic pathways and gluconeogenesis, the lack of de novo synthesis and reduced activity in hydrolysis of fatty acids, amino acids, and nucleotides indicated that T. kitauei in this vertebrate host–parasite system has adapted to inhabit a physiological environment extremely rich in both oxygen and nutrients (especially glucose), which is consistent with its preferred parasitic site, that is, the host gut submucosa. Taking advantage of the genomic and transcriptomic information, 23 potential nutrition-related T. kitauei-specific chemotherapeutic targets were identified. This first genome sequence of a myxozoan will facilitate development of potential therapeutics for efficient control of myxozoan parasites and ultimately prevent myxozoan-induced fish-borne illnesses in humans.

18S rRNA gene sequencing identifies a novel species of Henneguya parasitizing the gills of the channel catfish (Ictaluridae).

In the southeastern USA, the channel catfish Ictalurus punctatus is a host to at least eight different species of myxozoan parasites belonging to the genus Henneguya, four of which have been characterized molecularly using sequencing of the small subunit ribosomal RNA (SSU rRNA) gene. However, only two of these have confirmed life cycles that involve the oligochaete Dero digitata as the definitive host. During a health screening of farm-raised channel catfish, several fish presented with deformed primary lamellae. Lamellae harbored large, nodular, white pseudocysts 1.25 mm in diameter, and upon rupturing, these pseudocysts released Henneguya myxospores, with a typical lanceolate-shaped spore body, measuring 17.1 ± 1.0 μm (mean ± SD; range = 15.0-19.3 μm) in length and 4.8 ± 0.4 μm (3.7-5.6 μm) in width. Pyriform-shaped polar capsules were 5.8 ± 0.3 μm in length (5.1-6.4 μm) and 1.7 ± 0.1 μm (1.4-1.9 μm) in width. The two caudal processes were 40.0 ± 5.1 μm in length (29.5-50.0 μm) with a spore length of 57.2 ± 4.7 (46.8-66.8 μm). The contiguous SSU rRNA gene sequence obtained from myxospores of five excised cysts did not match any Henneguya sp. in GenBank. The greatest sequence homology (91% over 1,900 bp) was with Henneguya pellis, associated with blister-like lesions on the skin of blue catfish Ictalurus furcatus. Based on the unique combination of pseudocyst and myxospore morphology, tissue location, host, and SSU rRNA gene sequence data, we report this isolate to be a previously unreported species, Henneguya bulbosus sp. nov.

Occurrence of a Myxozoan ParasiteMyxidium streisingerin. sp. in Laboratory ZebrafishDanio rerio

Over several years of screening diagnostic cases, the Zebrafish International Resource Center Health Services has encountered a myxozoan parasite of the ducts associated with the kidney in zebrafish, Danio rerio , from an average of 21% of facilities submitting specimens over 5 yr. The parasite is coelozoic and is associated with no appreciable histological changes. Plasmodia bear ovoid spores with 3 sutural ridges. Spores are consistent with the genus Myxidium, but they are distinct from any known species and are thus described as Myxidium streisingeri n. sp. Phylogenetically, this parasite is a member of the polyphyletic urinary bladder clade, which is consistent with the site of infection. The common occurrence of a myxozoan in this closed husbandry system is unexpected because these parasites are known to have complex life cycles, alternating between a vertebrate and invertebrate host. It may be that biofilters provide habitat for suitable invertebrate hosts or perhaps M. streisingeri n. sp. can be transmitted directly. Future control of this parasite in zebrafish research laboratories depends on a better understanding of this life cycle.

Prevalence, morphology and scanning electron microscopy study of myxozoan parasites.

The present study was conducted from Garia, West Bengal, India to study the Prevalence, Morphology, Severity of infestation and Scanning Electron Microscopy of Myxozoan parasites in Indian Major Carps. A total of 155 fishes were examined, out of which 80 were found infected with myxozoan parasites (51.61%) and severity of infestation varied from 0.5 to 2. Three known species Myxobolus orissae, M. carnaticus and Thelohanellus caudatus were found infecting various organs such as gills and fins of Indian major carps. Spores of the species, T. caudatus measures 12.84±0.77 (11.4-14.2)μm×8.5±0.71 (7.6-9.6)μm and was elongated pyriform in shape with rounded posterior and tappering anterior end. Parietal folds were absent. The single polar capsule is rounded to oval shaped with slightly pointed anterior end and broad posterior end with size measuring 6.15±2.09 (4.2-10.4)μm×3.85±1.18 (2.3-4.9)μm. M. orissae, size of the mature spore measures 15.6-19.7 (17.25)μm×5.7-9.3 (6.70)μm and was elongated pyriform in shape. Two polar capsules are distinctly unequal. Large one measures 6.8-13.5 (8.75)×1.4-3.1 (1.90)μm and smaller one 6.9-11.5 (7.44)×1.7-2.4 (1.57)μm in size. Both are broadly pyriform with pointed pointed anterior end and rounded posterior end. Myxobolus carnaticus mature histozoic spores measures 8.1-12.9 (9.49)×7.2-10 (8.27)µm are creamy white to yellow in colour tear shaped in valvular view with rounded posterior and bluntly pointed anterior ends.

Persistence of Tetracapsuloides bryosalmonae (Myxozoa) in chronically infected brown trout Salmo trutta.

Proliferative kidney disease (PKD) is a widespread disease of farmed and wild salmonid populations in Europe and North America, caused by the myxozoan parasite Tetracapsuloides bryosalmonae. Limited studies have been performed on the epidemiological role in spread of the disease played by fish that survive infection with T. bryosalmonae. The aim of the present study was to evaluate the persistence of T. bryosalmonae developmental stages in chronically infected brown trout Salmo trutta up to 2 yr after initial exposure to laboratory-infected colonies of the parasite's alternate host, the bryozoan Fredericella sultana. Kidney, liver, spleen, intestine, brain, gills and blood were sampled 24, 52, 78 and 104 wk post-exposure (wpe) and tested for T. bryosalmonae by PCR and immunohistochemistry (IHC). Cohabitation trials with specific pathogen free (SPF) F. sultana colonies were conducted to test the viability of T. bryosalmonae. PCR detected T. bryosalmonae DNA in all tissue samples collected at the 4 time points. Developmental stages of T. bryosalmonae were demonstrated by IHC in most samples at the 4 time points. Cohabitation of SPF F. sultana with chronically infected brown trout resulted in successful transmission of T. bryosalmonae to the bryozoan. This study verified the persistence of T. bryosalmonae in chronically infected brown trout and their ability to infect the bryozoan F. sultana up to 104 wpe.

Study of Myxosporea (Myxozoa), infecting worldwide mullets with description of a new species.

Existing data on Myxozoa parasites infecting mullets were reviewed. The validity of nine species names was updated. Sixteen species were registered during analysis of original material collected in the Mediterranean, Black, Azov, and Japan Seas in 2004–2005. A new bivalvulid myxozoan parasite, Myxobolus adeli n. sp., was described from the inner organs of the golden grey mullet Liza aurata (Risso, 1810) collected in the Mediterranean (Ebro Delta, Spain), Black Sea (Kerch Strait, Ukraine), and Azov Sea (Genichesk, Ukraine) coastal waters. It is characterized by the presence of elongated, spindle-like cysts 0.5–1.3 mm in size, filled with wide transverse-oval spores about 6.2 × 7.2 × 4.6 μm in size, with two equal polar capsules measuring about 3.0 × 1.8 μm and short polar filament, turned into four coils. The obtained data show that this species differs from all previously described Myxobolus spp. with equal polar capsules. Comparative study of Myxobolus spp. recorded in worldwide mullets indicates a close relationship with M. adeli n. sp. and Myxobolus improvisus Isjumova, 1964 registered in mullets. Probably, the last species includes representatives of some different species, infecting freshwater and marine hosts.

Myxobolus anatolicus sp. nov. (Myxozoa) infecting the gill of Anatolian khramulya Capoeta tinca (Cyprinidae) in Turkey.

This work is part of an ongoing investigation into the characteristics of myxozoan parasites of freshwater fish in Turkey and was carried out using morphology, histopathology and molecular analysis. A new species of the genus Myxobolus (M. anatolicus sp. nov.) was found infecting the gills of 3 of 34 specimens (8.8%) of Anatolian khramulya Capoeta tinca from the Samsun Province, Northern Turkey. Both morphology and 18S rDNA sequence data revealed that M. anatolicus sp. nov. was distinct from other Myxobolus species found in the gills of cyprinid fishes. The small, white and round-shaped plasmodia, measuring 0.2 to 1.4 mm in diameter, were observed macroscopically in the gills. Histological analysis revealed that the cyst-like plasmodia have an intralamellar-vascular type development. Mature spores of M. anatolicus sp. nov. were oval in both frontal and sutural views, and tapered at the anterior poles. The spores were 10.1 ± 0.41 (9.4 to 10.7) µm long, 6.9 ± 0.28 (6.6 to 7.2) µm wide, and 4.5 ± 0.36 (4.4 to 4.6) µm thick. The 2 polar capsules were pyriform, equal in size, 4.6 ± 0.45 (4.4 to 4.8) µm long and 2.1 ± 0.12 (2 to 2.3) µm wide. Polar filaments within the polar capsules were coiled with 5 or 6 turns. Phylogenetic analysis placed M. anatolicus sp. nov. in a clade of gill-infecting myxobolids. This is the first record of a Myxobolus species infecting Anatolian khramulya Capoeta tinca, and the first record of this species from Eurasia.

Comparative susceptibility of Channel Catfish, Blue Catfish, and their hybrid cross to experimental challenge with Bolbophorus damnificus (Digenea: Bolbophoridae) cercariae.

The digenetic trematode Bolbophorus damnificus has been implicated in significant losses in catfish aquaculture since the late 1990s. The complex life cycle sequentially involves the American white pelican Pelecanus erythrorhynchos, the marsh rams horn snail Planorbella trivolvis, and Channel Catfish Ictalurus punctatus. Research supports anecdotal reports from the industry, suggesting that the hybrid of Channel Catfish×Blue Catfish I. furcatus is less susceptible to disease agents that have been historically prohibitive to Channel Catfish production, namely the gram-negative bacteria Edwardsiella ictaluri and Flavobacterium columnare, as well as the myxozoan parasite Henneguya ictaluri. This current research compared the susceptibility of Channel Catfish, Blue Catfish, and their hybrid cross to an experimental challenge by B. damnificus. Fish were exposed to 0, 100, 200, and 400 B. damnificus cercariae per fish, and the numbers of metacercariae per fish were determined 14 d postchallenge. Metacercariae were recovered from all challenged fish. There were no significant differences among fish groups challenged with the same dose, suggesting Channel and Blue Catfish and their hybrid are comparably susceptible to B. damnificus infection. As such, it is recommended that producers raising hybrid catfish remain diligent in controlling populations of the snail intermediate host to prevent production losses attributed to B. damnificus, especially when loafing pelicans have been observed at the aquaculture operation.

Proliferative kidney disease (PKD) agent Tetracapsuloides bryosalmonae in brown trout populations in Estonia.

Proliferative kidney disease (PKD) caused by the myxozoan parasite Tetracapsuloides bryosalmonae is a serious parasitic disease threatening both farmed and wild salmonid populations, but very little is currently known about the distribution of the parasite in the Baltic Sea region. In this study we (1) report the development of a novel multiplex PCR method for fast and reliable screening of T. bryosalmonae; (2) use this multiplex PCR method to show that the PKD agent T. bryosalmonae is widespread in natural brown trout Salmo trutta L. populations in Estonia; (3) evaluate monthly and yearly variation of T. bryosalmonae prevalence in juvenile trout; (4) assess T. bryosalmonae prevalence in different age-classes of fish (0+ vs. 1+ and older) and report the presence of the PKD agent in the kidneys of returning sea trout spawners; and (5) suggest the freshwater bryozoan Plumatella fungosa as a putative invertebrate host of T. bryosalmonae in Estonia. Our results demonstrate a highly heterogeneous distribution of T. bryosalmonae at the micro-geographic scale, indicating that PKD could have an important negative effect on recruitment in Estonian brown trout populations.

Myxidium ceccarellii n. sp. (Myxosporea) from the gallbladder of Leporinus elongatus (Anastomidae) from the São Francisco River, Brazil.

During a survey of myxozoan parasites of freshwater fish from the São Francisco River in Minas Gerais State, Brazil, plasmodia of Myxidium ceccarellii n. sp. were found in gallbladders of two out of six specimens (22%) of Leporinus elongatus (Anastomidae). Parasite plasmodia were translucent and greenish, with disporic sporoblasts that develop asynchronously. Mature myxospores were ellipsoidal in frontal and lateral views, with slightly pointed ends. The surfaces of each valve had four to six longitudinal grooves. Spores dimensions were as follows: length 17.7 ± 0.5 μm (17.1-18.1), width 10.4 ± 0.47 μm (9.8-11.3), and thickness 10.1 ± 0.27 μm (9.6-10.4). Two polar capsules, one at either end of the spore, had the length of 6.3 ± 0.5 μm (5.7-7.0) and width of 6.4 ± 0.44 μm (5.7-6.9), with four to five polar filament turns. Some aberrant spores had one or three polar capsules. Partial sequencing of M. ceccarellii n. sp. small subunit ribosomal RNA (ssrRNA) gene resulted in 1,845 bp. This is the first molecular study of a Myxidium species that parasitizes a South American freshwater fish. Phylogenetic reconstruction using ssrRNA gene sequences showed that M. ceccarellii n. sp. was positioned basally in a recognized clade of myxozoans that infect the biliary systems of nonfish vertebrates.

Parasites as biological tags of marine, freshwater and anadromous fishes in North America from the tropics to the Arctic

Parasites have been considered as natural biological tags of marine fish populations in North America for almost 75 years. In the Northwest Atlantic, the most studied species include Atlantic cod (Gadus morhua), Atlantic herring (Clupea harengus) and the redfishes (Sebastes spp.). In the North Pacific, research has centred primarily on salmonids (Oncorhynchus spp.). However, parasites have been applied as tags for numerous other pelagic and demersal species on both the Atlantic and Pacific coasts. Relatively few studies have been undertaken in the Arctic, and these were designed to discriminate anadromous and resident salmonids (Salvelinus spp.). Although rarely applied in fresh waters, parasites have been used to delineate certain fish stocks within the Great Lakes-St Lawrence River basin. Anisakid nematodes and the copepod Sphyrion lumpi frequently prove useful indicators in the Northwest Atlantic, while myxozoan parasites prove very effective on the coast and open seas of the Pacific Ocean. Relative differences in the ability of parasites to discriminate between fish stocks on the Pacific and Atlantic coasts may be due to oceanographic and bathymetric differences between regions. Molecular techniques used to differentiate populations and species of parasites show promise in future applications in the field.

Using Cure Models for Analyzing the Influence of Pathogens on Salmon Survival

AbstractParasites and pathogens influence the size and stability of wildlife populations, yet many population models ignore the population‐level effects of pathogens. Standard survival analysis methods (e.g., accelerated failure time models) are used to assess how survival rates are influenced by disease. However, they assume that each individual is equally susceptible and will eventually experience the event of interest; this assumption is not typically satisfied with regard to pathogens of wildlife populations. In contrast, mixture cure models, which comprise logistic regression and survival analysis components, allow for different covariates to be entered into each part of the model and provide better predictions of survival when a fraction of the population is expected to survive a disease outbreak. We fitted mixture cure models to the host–pathogen dynamics of Chinook Salmon Oncorhynchus tshawytscha and Coho Salmon O. kisutch and the myxozoan parasite Ceratomyxa shasta. Total parasite concentration, water temperature, and discharge were used as covariates to predict the observed parasite‐induced mortality in juvenile salmonids collected as part of a long‐term monitoring program in the Klamath River, California. The mixture cure models predicted the observed total mortality well, but some of the variability in observed mortality rates was not captured by the models. Parasite concentration and water temperature were positively associated with total mortality and the mortality rate of both Chinook Salmon and Coho Salmon. Discharge was positively associated with total mortality for both species but only affected the mortality rate for Coho Salmon. The mixture cure models provide insights into how daily survival rates change over time in Chinook Salmon and Coho Salmon after they become infected with C. shasta.