Museum Specimens Research Articles

Home-and-away comparisons of life history traits indicate enemy release and founder effects of the solitary bee, Megachile sculpturalis

Occurrences of introduced and invasive pollinators are increasing worldwide. To predict the potential impacts of exotic bees on native ecosystems we need to understand their ecological interactions. Life history traits are fundamental for understanding ecological interactions and often help to explain the spread of exotic species. We conducted home-and-away comparisons of life history traits of the first invasive bee in Europe, the sculptured resin bee Megachile sculpturalis Smith 1853. We compiled information on nest architecture, offspring, natural enemies, body size and phenology using published literature, museum specimen, data from citizen science initiatives, field observations and reared specimen. Megachile sculpturalis uses a broad variety of nesting materials for brood cell construction, including even plastic at the exotic range. Body size at warm temperate climate was similar in the native and exotic ranges, but phenology shifted forward by about one month (28.9 ± 3.3 SE days) in the exotic ranges. The abundance of natural enemies was similar between native and exotic ranges but specialist enemies were missing in the exotic ranges. These trait shifts may be explained by founder effects or ecological filtering. The comparison of life history traits in native and exotic ranges sheds light on the ecological-evolutionary process of this quickly spreading species and provides a better understanding of invasion processes in solitary bees.

An ankylosaur femur from the mid-Cretaceous of the peace region of northeastern British Columbia

Dinosaur skeletal material from the mid-Cretaceous of Canada is rare; however, the Cenomanian-aged Dunvegan Formation of northeastern British Columbia and northwestern Alberta is rich with ichnofossils attributed to nodosaurid ankylosaurs. A long bone (Hudson's Hope Museum specimen HH 2017.010.002) collected in 1993 from the Murray River of northeastern British Columbia is identified here as an ankylosaur femur. Femoral measurements of the bone plotted against femoral measurements of major dinosaur clades, combined with observations on femoral features, indicate that the bone belongs to an ankylosaur. The specimen is too damaged to assign to Nodosauridae or Ankylosauridae. HH 2017.010.002 represents the first limb bone material recovered from the Dunvegan Formation; previous ankylosaur material described from the Dunvegan Formation includes associated vertebrae and ribs from British Columbia and osteoderms from Alberta, as well as the presumed nodosaurid footprints Tetrapodosaurus borealis Sternberg, 1932. The Cenomanian is a time of great ecological change in North America, including the possible extirpation of ankylosaurid ankylosaurs. Fossils from the Dunvegan Formation can thus yield important insight into the responses of fauna to this major transition.

The Role of (Co)variation in Shaping the Response to Selection in New World Leaf-Nosed Bats.

AbstractUnderstanding and predicting the evolutionary responses of complex morphological traits to selection remains a major challenge in evolutionary biology. Because traits are genetically correlated, selection on a particular trait produces both direct effects on the distribution of that trait and indirect effects on other traits in the population. The correlations between traits can strongly impact evolutionary responses to selection and may thus impose constraints on adaptation. Here, we used museum specimens and comparative quantitative genetic approaches to investigate whether the covariation among cranial traits facilitated or constrained the response to selection during the major dietary transitions in one of the world's most ecologically diverse mammalian families-the phyllostomid bats. We reconstructed the set of net selection gradients that would have acted on each cranial trait during the major transitions to feeding specializations and decomposed the selection responses into their direct and indirect components. We found that for all transitions, most traits capturing craniofacial length evolved toward adaptive directions owing to direct selection. Additionally, we showed instances of dietary transitions in which the complex interaction between the patterns of covariation among traits and the strength and direction of selection either constrained or facilitated evolution. Our work highlights the importance of considering the within-species covariation estimates to quantify evolvability and to disentangle the relative contribution of variational constraints versus selective causes for observed patterns.

Checklist and distribution of Nepomorpha (Hemiptera: Heteroptera) from China.

An updated catalog of the infraorder Nepomorpha from China is provided based on literature reports, museum specimens, and field collections. In total, 214 species of Nepomorpha are listed in 6 superfamilies, 11 families, and 37 genera, including: Aphelocheiridae (1 genus, 27 species), Belostomatidae (3 genera, 7 species), Corixidae (9 genera, 52 species), Gelastocoridae (1 genus, 3 species), Helotrephidae (5 genera, 25 species), Micronectidae (1 genus, 28 species), Naucoridae (7 genera, 12 species), Nepidae (5 genera, 21 species), Notonectidae (4 genera, 32 species), Ochteridae (1 genus, 2 species) and Pleidae (1 genus, 5 species). Paraplea liturata (Fieber, 1844) is reported from mainland China for the first time. Distribution maps are provided for most species and are based on museum specimens and our field collections.

Bill shape reflects divergent prey consumption for island compared to mainland American kestrels (Falco sparverius)

Abstract Feeding morphology permits animals to adapt to changing environments and is often under strong selection. We evaluated if bill shape varies according to differences in dietary prey taken across geographical ranges (North America, Central America, South America, and Caribbean islands) in a ubiquitous, New World raptor species, the American kestrel (Falco sparverius). Specifically, we predicted that bills in geographies where kestrels consumed a larger proportion of vertebrates would be shorter and wider, with a larger tomial tooth. We reviewed the literature on kestrel diets across their range and quantified potential differences in bill shape using geometric morphometric methods for 245 museum specimens. The literature review revealed that most prey consumed by kestrels in North, South, and Central America were invertebrates (51.6–69.1%), whereas Caribbean kestrels consumed mostly vertebrates (61.4%), most of which were reptiles (77.3%). Morphometric analyses agreed with these findings; bill shape differed for island versus mainland kestrels but not among mainland regions. Bill shape on islands reflected a more robust bill with a larger tomial tooth, but had a longer hook, which we suggest is adaptive for consumption of lizard prey, more available on islands due to reduced competition with other raptors compared to mainland regions.

Systematic revision of the Eyelash Palm-Pitviper Bothriechis schlegelii (Serpentes, Viperidae), with the description of five new species and revalidation of three

We present a taxonomic review and systematic revision of the Eyelash Palm-Pitviper Bothriechis schlegelii (Berthold, 1846) based on examination of 400 museum specimens, a phylogeographic analysis of 818 locality records, and 80 individuals sampled for molecular characters. We find morphological and phylogenetic support for five new species of Bothriechis Peters, 1859, which we describe here based on their unique combination of molecular, meristic, hemipenial, and color pattern characteristics. They are: B. klebbaisp. nov., B. rasikusumorumsp. nov., B. khwargisp. nov., B. rahimisp. nov., and B. hussainisp. nov. Finally, we revalidate the names B. nigroadspersus (Steindachner, 1870), B. nitidus (Günther, 1859), and B. torvus (Posada Arango, 1889a), and provide a redescription of B. schlegelii.

Mitochondrial DNA structuring of Antarctic prions (Pachyptila desolata, Procellariidae)

Prions (Pachyptila) are small seabirds with a Southern Hemisphere breeding distribution. Antarctic prion (Pachyptila desolata) and Salvin’s prion (P. salvini) are two species that are regularly recorded in New Zealand as beach-wrecks but they are difficult to distinguish morphologically. Salvin’s prion is restricted to breeding on the Prince Edward Islands and Crozet Islands in the Indian Ocean but Antarctic prions have a circumpolar breeding distribution on numerous sub-Antarctic and Antarctic islands in the Southern, South Atlantic and Indian Oceans. Our aim was to examine the level of mitochondrial DNA (mtDNA) structuring within Antarctic prion and Salvin’s prion colonies, to test whether this technique can determine the provenance of beach-cast birds. The Auckland Islands Antarctic prion population exhibited distinct mtDNA haplotypes from all other populations, supporting the suggestion that these islands may have been an ice-free refugium during the Last Glacial Maximum. All other sampled breeding populations shared haplotypes, limiting the use of these sequences for determining the provenance of beach-cast birds. None of our museum specimens of Salvin’s prion collected from breeding colonies produced DNA sequences. This result indicates that the method by which these specimens, which were collected in the 1960s and 70s, were preserved, or subsequent treatments, has resulted in the loss of their DNA.

Wing lengths of three Arctic butterfly species decrease as summers warm in Alaska

Climate warming can cause arthropods to express plastic and/or evolved changes in morphology. Previous studies have demonstrated that body sizes of Arctic butterflies are influenced by the temperatures experienced as larvae. To investigate whether this was occurring among Alaskan butterflies, we analyzed temporal trends in the wing sizes of three Holarctic species, Colias hecla, Boloria chariclea and Boloria freija, using museum specimens collected in Arctic tundra regions of Alaska between 1971 and 1995. Wing length was compared to accumulated growing degree days (GDD) during both the spring of the year collected and the previous year's summer during the normal period of larval development. We used mixed‐effects models to test if spring and summer temperatures affected adult morphology. Results show that for every 1°C increase in average seasonal temperature, wingspans decreased between 0.7 and 5 mm, with B. freija the most strongly affected. Our results suggest that the morphological sensitivity of Arctic butterflies to warming is the outcome of interactions between life‐history traits and regional climate, with all species sensitive to warming the summer before the flight year as well as warming the spring of the flight year. Boloria freija, which overwinters as late instar larvae that do not feed before pupation the following spring, was particularly strongly affected by summer warming.

Three new shrews (Soricidae: Crocidura) from West Sumatra, Indonesia: elevational and morphological divergence in syntopic sister taxa

Abstract We describe 3 new species of shrews (Eulipotyphla, Soricidae, Crocidura) from West Sumatra, Indonesia. Two of these taxa were found above 1,800 m on Mt. Singgalang. The third taxon was found above 1,660 m on Mt. Talamau, 65 km northwest of Mt. Singgalang. We also resurrect Crocidura aequicauda based on 2 specimens from Mts. Tujuh and Kerinci, which lie near the border between West Sumatra and Jambi provinces. Several methodological approaches support our findings: linear cranial morphometrics, landmark-based 2D geometric morphometrics, and molecular phylogenetics using both mtDNA and 6 nuclear exons. A multilocus species-tree analysis places the 3 new species and C. aequicauda in a clade with the Javan endemics C. monticola and C. umbra. Although the 2 taxa from Mt. Singgalang are recovered as sister species, 1 is nearly twice the size of the other, and they are divergent in several other morphological characters, such as tail length, cranium size, and pelage color and texture. Recently diverged yet morphologically disparate sister taxa living syntopically in an isolated habitat “island,” like the montane forests of Mt. Singgalang, is unusual in mammals but documented in other Crocidura on neighboring Java and Borneo; these 2 new taxa represent the first known case of this phenomenon on Sumatra. Our results bring the number of Sumatran Crocidura to 10, 9 of which are endemic to the island. All 3 of the new species appear to be endemic to a single mountain and were not detected in similar surveys of nearby mountains. If this local endemism pattern is common, it would indicate that Sumatra’s mammal diversity may be severely underestimated, largely due to the paucity of small-mammal surveys and museum specimens.

Spatial variation in avian bill size is associated with temperature extremes in a major radiation of Australian passerines.

Morphology is integral to body temperature regulation. Recent advances in understanding of thermal physiology suggest a role of the avian bill in thermoregulation. To explore the adaptive significance of bill size for thermoregulation we characterized relationships between bill size and climate extremes. Most previous studies focused on climate means, ignoring frequencies of extremes, and do not reflect thermoregulatory costs experienced over shorter time scales. Using 79 species (9847 museum specimens), we explore how bill size variation is associated with temperature extremes in a large and diverse radiation of Australasian birds, Meliphagides, testing a series of predictions. Overall, across the continent, bill size variation was associated with both climate extremes and means and was most strongly associated with winter temperatures; associations at the level of climate zones differed from continent-wide associations and were complex, yet consistent with physiology and a thermoregulatory role for avian bills. Responses to high summer temperatures were nonlinear suggesting they may be difficult to detect in large-scale continental analyses using previous methodologies. We provide strong evidence that climate extremes have contributed to the evolution of bill morphology in relation to thermoregulation and show the importance of including extremes to understand fine-scale trait variation across space.

Life and Scientific Achievements of an Outstanding Pathologist. To the 150th Anniversary of Georgy V. Shor’s Birth

“Thanatology is the study of the signs, dynamics and statics of death,” this is a definition given by Georgy V. Shore to the science, to which he devoted his career. The professor was the father of the autopsy in Russia, made a huge contribution to the development of medical education, and strived for constant improvement of diagnostic and treatment options. His unique approach to the study of medicine was based on the intersection of clinic and morphology and attracted many followers. Georgy V. Shore devoted a significant part of his work to developing techniques for preserving anatomical museum specimens. As a dissector, Georgy V. Shore contributed greatly to the invention of new autopsy techniques to facilitate and improve the work of pathologists; and today we use the approaches he developed. The ideas presented in his “Teaching of Death” are the quintessence of the scientific thought of Georgy V. Shor and are still discussed by the medical community. Where people saw only death, G.V. Shor was discovering something new for life. This year is the 150th anniversary of Georgy V. Shor’s birth; it is worth remembering the significant events associated with the name of this brilliant scientist

Wide-spread dispersal in a deep-sea brooding polychaete: the role of natural history collections in assessing the distribution in quill worms (Onuphidae, Annelida)

BackgroundModern integrative taxonomy-based annelid species descriptions are detailed combining morphological data and, since the last decades, also molecular information. Historic species descriptions are often comparatively brief lacking such detail. Adoptions of species names from western literature in the past led to the assumption of cosmopolitan ranges for many species, which, in many cases, were later found to include cryptic or pseudocryptic lineages with subtle morphological differences. Natural history collections and databases can aid in assessing the geographic ranges of species but depend on correct species identification. Obtaining DNA sequence information from wet-collection museum specimens of marine annelids is often impeded by the use of formaldehyde and/or long-term storage in ethanol resulting in DNA degradation and cross-linking.ResultsThe application of ancient DNA extraction methodology in combination with single-stranded DNA library preparation and target gene capture resulted in successful sequencing of a 110-year-old collection specimen of quill worms. Furthermore, a 40-year-old specimen of quill worms was successfully sequenced using a standard extraction protocol for modern samples, PCR and Sanger sequencing. Our study presents the first molecular analysis of Hyalinoecia species including the previously known species Hyalinoecia robusta, H. tubicloa, H. artifex, and H. longibranchiata, and a potentially undescribed species from equatorial western Africa morphologically indistinguishable from H. tubicola. The study also investigates the distribution of these five Hyalinoecia species. Reassessing the distribution of H. robusta reveals a geographical range covering both the Atlantic and the Indian Oceans as indicated by molecular data obtained from recent and historical specimens.ConclusionOur results represent an example of a very wide geographical distribution of a brooding deep-sea annelid with a complex reproduction strategy and seemingly very limited dispersal capacity of its offspring, and highlights the importance of molecular information from museum specimens for integrative annelid taxonomy and biogeography.

The need for proper archiving and referencing of sound recordings in taxonomic studies of birds

Abstract A survey of recent taxonomic studies of birds that included acoustic trait analyses reveals that most studies have not archived the sound recordings that support their conclusions, despite the current availability of online, publicly available collections of bird sounds. In addition, bird sound recordings have often been cited without unique accession numbers that permit unambiguous sample identification and in considerably less detail than other types of samples, such as museum specimens or genetic samples. Both this lack of data openness and the way acoustic samples have been cited undermine the methodological rigor that otherwise characterizes many of these studies, and much invaluable biological data are likely to be lost over time if bird sound recordings are not archived in long-term collections. I suggest that these problems can be easily addressed by embracing the open data movement and adopting some best practices that are widely used in other fields. Just as study skins and DNA sequences are required to be deposited in publicly available collections such as natural history museums and the GenBank, respectively, sound recordings used in taxonomic studies with acoustic trait analyses should be archived in publicly available collections as a condition for publication of associated results. Authors of taxonomic studies involving sounds should archive their sound recordings and provide unique accession numbers for sound recordings examined, and journals and reviewers should ensure that authors have done so. By embracing the open data movement, research studying avian acoustic signals is expected to become more transparent, reproducible, and useful.

The Complete Genome Sequences of seven species of sea slugs (Nudibranchia, Gastropoda, Mollusca).

We present the complete genome sequences of seven species of sea slugs. Illumina sequencing was performed on tissue from wild-collected museum specimens. The reads were assembled using a de novo method followed by a finishing step. The raw and assembled data are publicly available via Genbank.

Introduced and extinct: neglected archival specimens shed new light on the historical biogeography of an iconic avian species in the Mediterranean.

Collection specimens provide valuable and often overlooked biological material that enables addressing relevant, long-unanswered questions in conservation biology, historical biogeography, and other research fields. Here, we use preserved specimens to analyze the historical distribution of the black francolin (Francolinus francolinus, Phasianidae), a case that has recently aroused the interest of archeozoologists and evolutionary biologists. The black francolin currently ranges from the Eastern Mediterranean and the Middle East to the Indian subcontinent, but, at least since the Middle Ages, it also had a circum-Mediterranean distribution. The species could have persisted in Greece and the Maghreb until the 19th century, even though this possibility had been questioned due to the absence of museum specimens and scant literary evidence. Nevertheless, we identified four 200-year-old stuffed black francolins-presumably the only ones still existing-from these areas and sequenced their mitochondrial DNA control region. Based on the comparison with conspecifics (n = 396) spanning the entirety of the historic and current species range, we found that the new samples pertain to previously identified genetic groups from either the Near East or the Indian subcontinent. While disproving the former occurrence of an allegedly native westernmost subspecies, these results point toward the role of the Crown of Aragon in the circum-Mediterranean expansion of the black francolin, including the Maghreb and Greece. Genetic evidence hints at the long-distance transport of these birds along the Silk Road, probably to be traded in the commerce centers of the Eastern Mediterranean.

A novel automated label data extraction and data base generation system from herbarium specimen images using OCR and NER

Digital extraction of label data from natural history specimens along with more efficient procedures of data entry and processing is essential for improving documentation and global information availability. Herbaria have made great advances in this direction lately. In this study, using optical character recognition (OCR) and named entity recognition (NER) techniques, we have been able to make further advancements towards fully automatic extraction of label data from herbarium specimen images. This system can be developed and run on a consumer grade desktop computer with standard specifications, and can also be applied to extracting label data from diverse kinds of natural history specimens, such as those in entomological collections. This system can facilitate the digitization and publication of natural history museum specimens around the world.

Trophic history of Hawaiian green turtles as revealed by stable isotope ratios (δ13C, δ15N and δ34S) in the bones of museum specimens

Abstract Understanding consumer trophic status and long‐term dietary changes can yield information about impacts of altered habitats on their ecology. In Hawai'i, coastal ecosystems have been significantly modified by the introduction of invasive seaweeds and mangroves, high nutrient load and overfishing, but so far, much is still to be understood about how these changes have affected the green turtle (Chelonia mydas). This study analyzed stable carbon, nitrogen, and sulfur isotope ratios in the bone tissue of modern and museum specimens of green turtles collected from 1901 to 2020 in Oahu and the North‐western Hawaiian Islands to understand how their isotopic niche has changed through time, a crucial step towards restoring the ecological role of a formerly decimated species. The standard ellipse size and the total area of the convex hull of the isotopic niche of green turtles in three periods (1901–1951, 1992–2008, and 2018–2020) were calculated. The stable isotope values of ancient green turtles (1901–1951) suggest that they relied heavily on macroalgae even before the introduction of exotic species and eutrophication promoted the development of algal pastures. However, a few ancient green turtles relied heavily on seagrasses, and others complemented their macroalgae‐based diets with significant amounts of animal matter. Such diet specialists were missing from the sample of current green sea turtles, suggesting that these foraging strategies are less common or perhaps even absent in the current population. The results suggest that green turtles have converged on the use of the most abundant resource, red macroalgae, likely because of the homogenization and simplification of coastal habitats and food webs due to anthropogenic influences. Restoring the population size of herbivorous fishes and a more diverse ecosystem structure may be necessary to recover the array of trophic strategies formerly present in the Hawaiian green turtle population.

Determining the generation length and level of morphological and genetic differentiation in the Data Deficient glossy grass skink (Pseudemoia rawlinsoni)

Context Human activities are having a significant impact on biodiversity worldwide, to the extent that we are in the midst of the sixth mass extinction event. Although a substantial proportion of species globally have an elevated risk of extinction, some species are poorly known and there is insufficient information available to adequately assess their risk of extinction. Aims and methods One such species is the glossy grass skink (Pseudemoia rawlinsoni), a widespread but enigmatic lizard species in south-eastern Australia. In order to improve our knowledge of its life history, and particularly its generation length, we examined museum specimens collected from across the range of the species, supplemented with measurements from field-caught individuals. Key results We estimated that the species reaches sexual maturity in 3 years, at approximately 40 mm snout–vent length. Its generation length was estimated as 5 years. Sexual dimorphism was evident, and female body size was positively related to litter size. Although there was no evidence for substantial variation in morphology across the range of the glossy grass skink, a phylogeographic analysis using mitochondrial DNA sequence data (ND4) revealed the presence of seven genetic sublineages (up to 5.1% genetic divergence) within the species. Conclusions The glossy grass skink appears to be a single, but widespread and genetically variable, species. Implications Our study demonstrates how a targeted, multifaceted study can be effective at rapidly gathering data that can be used to contribute vital information to the assessment of extinction risk in Data Deficient species.

Chytrid infections exhibit historical spread and contemporary seasonality in a declining stream-breeding frog.

Species with extensive geographical ranges pose special challenges to assessing drivers of wildlife disease, necessitating collaborative and large-scale analyses. The imperilled foothill yellow-legged frog (Rana boylii) inhabits a wide geographical range and variable conditions in rivers of California and Oregon (USA), and is considered threatened by the pathogen Batrachochytrium dendrobatidis (Bd). To assess drivers of Bd infections over time and space, we compiled over 2000 datapoints from R. boylii museum specimens (collected 1897-2005) and field samples (2005-2021) spanning 9° of latitude. We observed a south-to-north spread of Bd detections beginning in the 1940s and increase in prevalence from the 1940s to 1970s, coinciding with extirpation from southern latitudes. We detected eight high-prevalence geographical clusters through time that span the species' geographical range. Field-sampled male R. boylii exhibited the highest prevalence, and juveniles sampled in autumn exhibited the highest loads. Bd infection risk was highest in lower elevation rain-dominated watersheds, and with cool temperatures and low stream-flow conditions at the end of the dry season. Through a holistic assessment of relationships between infection risk, geographical context and time, we identify the locations and time periods where Bd mitigation and monitoring will be critical for conservation of this imperilled species.

Phylogeny and divergence time estimation of Io moths and relatives (Lepidoptera: Saturniidae: Automeris).

The saturniid moth genus Automeris includes 145 described species. Their geographic distribution ranges from the eastern half of North America to as far south as Peru. Automeris moths are cryptically colored, with forewings that resemble dead leaves, and conspicuously colored, elaborate eyespots hidden on their hindwings. Despite their charismatic nature, the evolutionary history and relationships within Automeris and between closely related genera, remain poorly understood. In this study, we present the most comprehensive phylogeny of Automeris to date, including 80 of the 145 described species. We also incorporate two morphologically similar hemileucine genera, Pseudautomeris and Leucanella, as well as a morphologically distinct genus, Molippa. We obtained DNA data from both dry-pinned and ethanol-stored museum specimens and conducted Anchored Hybrid Enrichment (AHE) sequencing to assemble a high-quality dataset for phylogenetic analysis. The resulting phylogeny supports Automeris as a paraphyletic genus, with Leucanella and Pseudautomeris nested within, with the most recent common ancestor dating back to 21 mya. This study lays the foundation for future research on various aspects of Automeris biology, including geographical distribution patterns, potential drivers of speciation, and ecological adaptations such as antipredator defense mechanisms.