Soil degradation and high environmental costs impede agricultural production in North China. A 6-year field experiment was conducted to determine the effects of tillage practice and nitrogen application rate on changes in soil fertility and wheat yield. Four tillage systems (rotary tillage without maize straw return through 6 years, RT; rotary tillage with maize straw return through 6 years, RS; deep tillage with maize straw return through 6 years, DS; and rotary tillage through 2 years followed by deep tillage next year with maize straw applied for two cycles, RS/DS) and three N levels (HN, 300 kg N ha−1, refers to traditional farming practice; MN, 0.75 × HN, 225 kg N ha−1, to recommended N rate; and LN, 0.5 × HN, 150 kg N ha−1, to reduced N rate) were tested. The soil organic carbon, labile organic carbon, inorganic N, available phosphorus, and available potassium under straw return treatments were significantly higher than RT in the 0–30 cm soil layer (p < 0.05). The microbial diversity, invertase, urease, and alkaline phosphatase activities also increased when maize straw was returned. Tillage practices could distribute maize straw in different depths of the soil and then affect soil nutrients, enzyme activity, and microbial diversity. The RS treatment presented the greatest effects in the 0–10 cm layer, while more significant impacts were observed in DS and RS/DS treatments at the 10–30 cm depths. The levels of soil nutrients and enzyme activity increased with an increased N rate. Compared to that under LN, wheat yields increased under HN and MN treatments, whereas there were no significant differences between HN and MN (p > 0.05). An increasing tendency of grain yield was observed in DS and RS/DS, while conversely so in RS. RS/DS had lower farm costs than DS during the study duration. Thus, RS/DS at 225 kg N ha−1 is the best method for improving soil fertility and wheat yield.
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