Steady-state Fluorescence Anisotropy Measurements Research Articles

On the synergy/antagonism of selected terpenes in the effect on lipid membranes studied in model systems

In this work the influence of the mixtures of four terpenes on the lipid monolayers and bilayers imitating bacteria membrane was analyzed. The aim of these investigations was to verify possible synergistic/antagonistic effects occurring between terpenes and affecting their influence on membranes. The studies were performed for major and minor components of the hop essential oil, namely: β-myrcene, α-humulene, E-β-Farnesene and limonene. The experiments on monolayers were based on the studies on penetration of terpenes and their mixtures into model systems, on the surface pressure-area measurements, and Brewster angle microscopy studies, while for bilayers they involved the hydrodynamic diameter, zeta potential and steady-state fluorescence anisotropy measurements of liposomes. Based on the collected results it was concluded that the synergy occurring between selected terpenes increases the effect of their mixtures on monolayers and bilayers as compared to particular components. Among the studied mixed terpene systems the equimolar myrcene/humulene/farnesene/limonene system was found to penetrate the most strongly into the monolayer and change its morphology as well as to make the bilayer more fluid. Additionally, from the comparison of these results with those published for the hop oil it was summarized that neither the studied mixtures nor the individual studied terpenes change the properties of the model membranes as effectively as the total extract. Thus, the action of the hop oil on membrane is not determined by its major components but it is rather the result of the interactions and synergy between major and minor components.

The effect of major terpenes of the hop essential oil on the mixed monolayers and bilayers imitating bacteria membranes. In search of the natural pesticides.

From the point of view of environmental problems, the search of the natural antimicrobial agents for various applications, including agriculture, is highly important. In this paper the studies on the effect of β-myrcene and α-humulene on the mixed monolayers and bilayers imitating bacteria membranes were done and the in vitro tests on plant pathogen bacteria Pseudomonas syringae pv. lachrymans PCM 1410 were performed. These terpenes are the main components of the hop essential oil, for which strong potential against phytopathogenic bacteria was confirmed. Thus, the studies were aimed at determining the terpene, which is responsible for antibacterial effect of total extract. During experiments the surface pressure-area measurements, penetration studies and Brewster angle microscopy (BAM) studies on the lipid monolayers were performed and hydrodynamic diameter, zeta potential and steady-state fluorescence anisotropy measurements of liposomes were done. As it was found, both terpenes change the organization of model membranes and make them less stable. Although humulene is of stronger ability to incorporate into the studied systems, neither humulene nor myrcene determine the strong penetration effect observed for the hop essential oil. Moreover, the action of both terpenes on membranes is connected with the partial extraction of the monolayer material from the interface. It was concluded that both terpenes used separately do not act on bacteria membrane as effectively as the hop essential oil and they are not directly responsible for antimicrobial effect of the total extract. However, they may change membrane organization and the same facilitate the incorporation of other active substances into the cell.

Collisional mechanism of ligand release by Bombyxmori JHBP, a member of the TULIP / Takeout family of lipid transporters

Juvenile hormones (JHs) regulate important processes in insects, such as postembryonic development and reproduction. In the hemolymph of Lepidoptera, these lipophilic sesquiterpenic hormones are transported from their site of synthesis to target tissues by high affinity carriers, the juvenile hormone binding proteins (JHBPs). Lepidopteran JHBPs belong to a recently uncovered, yet very ancient family of proteins sharing a common lipid fold (TULIP domain) and involved in shuttling various lipid ligands. One important, but poorly understood aspect of JHs action, is the mechanism of hormone transfer to or through the plasma membranes of target cells. Since many membrane-active peptides and proteins, such as the pore-forming bacterial toxins, are activated by low pH or interaction with phospholipid membranes, we have examined the effect of these factors on JH binding by JHBPs. The affinity of Bombyx mori and Manduca sexta JHBPs for JH III was determined by the DCC assay, equilibrium dialysis, and isothermal titration calorimetry, and found to be greatly reduced at low pH, in agreement with previous observations. Loss of binding was accompanied by changes in fluorescence and near-UV CD spectra, indicating significant changes in protein structure in the environment of aromatic residues. The apparent dissociation rate constant (koff) of the JHBP-JH III complex was greater at acidic pH, suggesting that low pH favors ligand release by opening of the binding pocket. The affinity of recombinant B. mori JHBP (rBmJHBP) was also decreased in the presence of anionic phospholipid vesicles. Measurements of steady-state fluorescence anisotropy with the lipophilic probe TMA-DPH demonstrated that rBmJHBP specifically interacts with anionic membranes. These results suggest the existence of a collisional mechanism for ligand release that may be important for delivery of JHs to the target cells, and could be relevant to the function of related members of this emerging family of lipid-transport proteins.

Behavior of the DPH fluorescence probe in membranes perturbed by drugs.

1,6-Diphenyl-1,3,5-hexatriene (DPH) is one of the most commonly used fluorescent probes to study dynamical and structural properties of lipid bilayers and cellular membranes via measuring steady-state or time-resolved fluorescence anisotropy. In this study, we present a limitation in the use of DPH to predict the order of lipid acyl chains when the lipid bilayer is doped with itraconazole (ITZ), an antifungal drug. Our steady-state fluorescence anisotropy measurements showed a significant decrease in fluorescence anisotropy of DPH embedded in the ITZ-containing membrane, suggesting a substantial increase in membrane fluidity, which indirectly indicates a decrease in the order of the hydrocarbon chains. This result or its interpretation is in disagreement with the fluorescence recovery after photobleaching measurements and molecular dynamics (MD) simulation data. The results of these experiments and calculations indicate an increase in the hydrocarbon chain order. The MD simulations of the bilayer containing both ITZ and DPH provide explanations for these observations. Apparently, in the presence of the drug, the DPH molecules are pushed deeper into the hydrophobic membrane core below the lipid double bonds, and the probe predominately adopts the orientation of the ITZ molecules that is parallel to the membrane surface, instead of orienting parallel to the lipid acyl chains. For this reason, DPH anisotropy provides information related to the less ordered central region of the membrane rather than reporting the properties of the upper segments of the lipid acyl chains.

An insight into the dependence of the deamination rate of human APOBEC3F on the length of single-stranded DNA, which is affected by the concentrations of APOBEC3F and single-stranded DNA

BackgroundAPOBEC3F (A3F), a member of the human APOBEC3 (A3) family of cytidine deaminases, acts as an anti-HIV-1 factor by deaminating deoxycytidine in the complementary DNA of the viral genome. A full understanding of the deamination behavior of A3F awaits further investigation. MethodsThe real-time NMR method and uracil-DNA glycosylase assay were used to track the activities of the C-terminal domain (CTD) of A3F at different concentrations of A3F-CTD and ssDNA. The steady-state fluorescence anisotropy measurement was used to examine the binding between A3F-CTD and ssDNA with different lengths. The use of the A3F-CTD N214H mutant, having higher activity than the wild-type, facilitated the tracking of the reactions. ResultsA3F-CTD was found to efficiently deaminate the target deoxycytidine in long ssDNA in lower ssDNA concentration conditions ([A3F-CTD] ≫ [ssDNA]), while the target deoxycytidine in short ssDNA is deaminated efficiently in higher ssDNA concentration conditions ([A3F-CTD] ≪ [ssDNA]). This property is quite different from that of the previously studied A3 family member, A3B; the concentrations of the proteins and ssDNA had no effect. ConclusionsThe concentrations of A3F-CTD and ssDNA substrates affect the ssDNA-length-dependence of deamination rate of the A3F-CTD. This unique property of A3F is rationally interpreted on the basis of its binding characteristics with ssDNA. General significanceThe discovery of the unique property of A3F regarding the deamination rate deepens the understanding of its counteraction against HIV-1. Our strategy is applicable to investigate the other aspects of the A3 activities, such as those involved in the cancer development.

Itraconazole Perturbs Behavior of Fluorescent Probes in Lipid Bilayer

1,6-diphenyl-1,3,5-hexatriene (DPH) is a frequently used fluorescence probe to study the ordering and mobility of the lipids bilayer. Here we present our studies combining molecular dynamics (MD) simulations and fluorescence anisotropy measurements in the lipid bilayer with antifungal drug Itraconazole (ITZ) added. ITZ is long, rigid, amphipathic molecule locating in the lipid bilayer below the water-membrane interface and adopting orientation parallel to the membrane surface [1]. MD simulations showed that ITZ increases the order of the hydrocarbon chains in their upper part and slightly decrease order of the lower part of the chain while steady-state fluorescence anisotropy measurement indicated substantial disordering effect of the ITZ. MD simulations of the bilayer with both ITZ and DPH showed that DPH behavior in this bilayer is determined by ITZ and not by lipids chains as assumed in traditional interpretation - DPH locates below ITZ thus its position is shifted towards bilayer center and adopt orientation parallel to the membrane surface which likely results from interactions with ITZ. These results show the limitation of the DPH in studies of lipid bilayers as DPH might report the behavior of, e.g. ITZ like molecules instead of lipids hydrocarbon chains.

The influence of the essential oil extracted from hops on monolayers and bilayers imitating plant pathogen bacteria membranes.

Many plant-derived compounds possess antimicrobial, antioxidant and even anticancer activities. Therefore, they are considered as substances that can be used instead of synthetic compounds in various applications. In this work, the essential oil from hop cones was extracted and analyzed, and then its effects on model bacteria membranes were studied to verify whether the hop essential oils could be used as ecological pesticides. The experiments involved surface pressure-area measurements, penetration studies and Brewster angle microscopy (BAM) imaging of lipid monolayers as well as hydrodynamic diameter, zeta potential, steady-state fluorescence anisotropy and Cryo-Transmission Electron Microscopy (cryo-TEM) measurements of liposomes. Finally the bactericidal tests on plant pathogen bacteria Pseudomonas syringae pv. lachrymans PCM 1410 were performed. The obtained results showed that the components of the essential oils from hop cones incorporate into lipid monolayers and bilayers and alter their fluidity. However, the observed effect is determined by the system composition, its condensation and the oil concentration. Interestingly, at a given dose, the effect of the essential oil on membranes was found to stabilize. Moreover, BAM images proved that hop oil prevents the formation of a large fraction of a condensed phase at the interface. Both the studies on model membranes as well as the in vitro tests allow one to conclude that the hop essential oil could likely be considered as the candidate to be used in agriculture as a natural pesticide.

Unveiling the pH dependent interaction between bolaamphiphiles (dicarboxylic acids) and C10TAB (decyltrimethylammonium bromide) in aqueous medium

Development of stable self-assembled nanostructures (especially vesicles and liposomes), and understanding their physicochemical behaviors in aqueous solution is a long-standing topic of interest in chemical and biochemical research. In this progressive area, we report for the first-time formation of mixed micelles (at pH 12), and vesicles of anionic bolaamphiphiles (dicarboxylic acids viz. HOOC-(CH2)n-COOH, with moderate values of n 10, 11, 12, and 14) in combination with a cationic surfactant decyltrimethylammonium bromide (C10TAB) in buffered aqueous medium at different pH (6.0, 6.5, 6.8, and 8.0 for bola 10, 11, 12, and 14, respectively). Three pH dependent states of the solutions are observed: clear (high pH > 8), turbid and translucent (mid pH ≈ 6–8), and viscous inhomogeneous oil-like state (low pH < 6). The micelle size varies from 6.24 to 7.43 nm at pH 12, for vesicles the values are large (220–296 nm), and small (∼30–70 nm) in the pH range of 6.0–8.0. The self-assembly formation properties of their mixtures are herein investigated using different techniques viz. UV–vis spectroscopy, fluorescence spectroscopy, dynamic light scattering, laser confocal scanning microscopy, and isothermal titration calorimetry. The formed vesicles are fairly polydisperse, and show overall spherical shape. Formation of the bilayer assemblies, and their conversion to mixed micelles by the temperature effect are observed from steady state fluorescence anisotropy measurements. Micellization of the mixed bola-C10TAB species is endothermic and fairly entropy controlled; their formation/deformation is pH sensitive. They have spherical morphologies, and once formed at the right pH they are found to be very stable in terms of time. Thus, these vesicles have prospects for encapsulation and delivery of materials like drugs, and other substrates by controling the acid-base conditions of the system environment. The formed mixed micelles, and vesicles are expected to be low toxic, and thus green materials in nature with wider application possibilites.

Zwitterionic betaine transition from micelles to vesicles induced by cholesterol

Vesicle formation by self-assembly in an aqueous mixture of zwitterionic carboxylate betaine surfactant and cholesterol was studied as a potential drug delivery nanocarrier. In this study, pyrene and 1,6-Diphenyle1-1,3,5-hexatrine (DPH) were applied as fluorescence probes that provides information on polarity and fluidity of the microenvironment, and used to monitor the transition of zwitterionic betaine from monomers to micelles, and to vesicles promoted by addition of cholesterol to micellar solutions through the variation of vibronic peak intensity ratio I1/I3 of the pyrene and solubilization with intensity quenching I428 of (DPH). In addition, the steady-state and time-resolved fluorescence anisotropy measurements of the (DPH) probe provides information on the effect of cholesterol on the dynamic properties vesicle membrane and vesicular distribution accompanied by dynamic light scattering (DLS), transmission electron microscopy (TEM), and turbidity measurements. Our results show an abrupt change of the ratio I1/I3 of pyrene and fluorescence intensity I428 of (DPH) in the transition from monomer to micelle with increasing betaine concentration, as well as fluorescence anisotropy results thought the transition from micelle to vesicle promoted by cholesterol and confirmed by TEM result. Furthermore, the fluorescence anisotropy measurements shows that addition of small amount of cholesterol to zwitterionic betaine micelle have a significant influence on the molecular packing leading to vesicle formation and increasing bilayer rigidity with increasing cholesterol concentration up to χchol=0.25.

Spectroscopic investigation on interaction of toluidine blue/ AOT/ γ-cyclodextrin ternary system

Interaction of toluidine blue (TB), a biologically potent cationic phenothiazinium dye, with anionic surfactant, sodium bis(2-ethylhexyl) sulfosuccinate (AOT) have been thoroughly studied employing absorption and emission spectroscopy. A completely distinct spectral behavior of TB has been observed corresponding to pre-micellar and post-micellar region of AOT. Steady-state fluorescence anisotropy measurement has been carefully undertaken to rationalize the spectroscopic results. Effect of γ-cyclodextrin (γ-CD) on the spectral properties of TB has also been encountered for understanding of binding interaction between them. Molecular docking study has been accomplished to enlighten the probable orientation of TB inside the γ-CD core. Here particular interest has been focused on a mixed system, composed of AOT pre-micelles and γ-CD. A remarkable diminution of both absorption and emission intensities of TB has been observed in AOT pre-micelle with a simultaneous colorimetric change of TB solution from dark blue to lavender, and subsequent addition of γ-CD results in enhancement of intensities with dramatic reversal of the lavender colored solution to the original dark blue color. The emission characteristics of TB in the presence of AOT and γ-CD may prove as promising for an ‘IMPLICATION’ logic gate which may perform a significant role in the field of molecular electronics.

Properties of Ultraviolet Exposed Camptothecin Studied by Using Optical Spectroscopy Methods.

Camptothecin (CPT) and its analogs as inhibitors of topoisomerase I are anticancer compounds. Their antitumor potency is seriously limited due to hydrolysis of lactone form of camptothecins in solutions at pH>5.5, which leads to the formation of inactive carboxylate form with open lactone ring. Furthermore, the clinical application of CPT is also restricted by strong affinity of its carboxylate form to human serum albumin which destabilizes the active lactone form. By UV irradiation of the CPT carboxylate authors of this paper received camptothecin compound which has biophysical properties similar to the lactone form. The specific objective of the project is to determine the properties using the methods of absorption and steady-state fluorescence spectra analysis, fluorescence lifetime measurements as well as steady-state fluorescence anisotropy. The results suggest that the UV exposed camptothecin carboxylate changes the chemical structure. The high-throughput assays based on the steady state fluorescence anisotropy measurements proved that the form obtained as a result of UV irradiation of CPT carboxylate exhibits weaker affinity to albumin than CPT carboxylate however stronger than CPT lactone. This property is very desirable from the point of view of clinical applications.

Effective lipid-detergent system for study of membrane active peptides in fluid liposomes.

The structure of peptide antibiotic gramicidin A (gA) was studied in phosphatidylcholin liposomes modified by nonionic detergent Triton X-100. First, the detergent : lipid ratio at which the saturation of lipid membrane by Triton X-100 occurs (Re (sat)), was determined by light scattering. Measurements of steady-state fluorescence anisotropy of 1,6-diphenyl-1,3,5-hexatriene at sublytic concentrations of detergent showed that after saturation of the membrane by Triton X-100 microviscosity of lipid bilayer is reduced by 20%. The equilibrium conformational state of gA in phosphatidylcholine liposomes at Re (sat) was studied by CD spectroscopy. It was found that the conformational state of this channel-forming peptide changed crucially when Triton X-100 induced transition to more fluid membranes. The gA single-channel measurements were made with Triton X-100 containing bilayers. Tentative assignment of the channel type and gA structures was made by correlation of CD data with conductance histograms. Lipid-detergent system with variable viscosity developed in this work can be used to study the structure and folding of other membrane-active peptides.

Novel hybrid materials for preparation of bone tissue engineering scaffolds.

The organic-inorganic hybrid systems based on biopolymer hydrogels with dispersed silica nanoparticles were obtained and characterized in terms of their physicochemical properties, cytocompatibility and bioactivity. The hybrid materials were prepared in a form of collagen and collagen-chitosan sols to which the silica nanoparticles of two different sizes were incorporated. The ability of these materials to undergo in situ gelation under physiological temperature was assessed by microviscosity and gelation time determination based on steady-state fluorescence anisotropy measurements. The effect of silica nanoparticles addition on the physicochemical properties (surface wettability, swellability) of hybrid materials was analyzed and compared with those characteristic for pristine collagen and collagen-chitosan hydrogels. Biological studies indicate that surface wettability determined in terms of contact angle for all of the hybrids prepared is optimal and thus can provide satisfactory adhesion of fibroblasts. Cytotoxicity test results showed high metabolic activity of mouse as well as human fibroblast cell lines cultured on hybrid materials. The composition of hybrids was optimized in terms of concentration of silica nanoparticles. The effect of silica on the formation of bone-like mineral structures on exposition to simulated body fluid was determined. SEM images revealed mineral phase formation not only at the surfaces but also in the whole volumes of all hybrid materials developed suggesting their usefulness for bone tissue engineering. EDS and FTIR analyses indicated that these mineral phases consist of apatite-like structures.

Inhibition of arenavirus infection by a glycoprotein-derived peptide with a novel mechanism.

The family Arenaviridae includes a number of viruses of public health importance, such as the category A hemorrhagic fever viruses Lassa virus, Junin virus, Machupo virus, Guanarito virus, and Sabia virus. Current chemotherapy for arenavirus infection is limited to the nucleoside analogue ribavirin, which is characterized by considerable toxicity and treatment failure. Using Pichinde virus as a model arenavirus, we attempted to design glycoprotein-derived fusion inhibitors similar to the FDA-approved anti-HIV peptide enfuvirtide. We have identified a GP2-derived peptide, AVP-p, with antiviral activity and no acute cytotoxicity. The 50% inhibitory dose (IC50) for the peptide is 7 μM, with complete inhibition of viral plaque formation at approximately 20 μM, and its antiviral activity is largely sequence dependent. AVP-p demonstrates activity against viruses with the Old and New World arenavirus viral glycoprotein complex but not against enveloped viruses of other families. Unexpectedly, fusion assays reveal that the peptide induces virus-liposome fusion at neutral pH and that the process is strictly glycoprotein mediated. As observed in cryo-electron micrographs, AVP-p treatment causes morphological changes consistent with fusion protein activation in virions, including the disappearance of prefusion glycoprotein spikes and increased particle diameters, and fluorescence microscopy shows reduced binding by peptide-treated virus. Steady-state fluorescence anisotropy measurements suggest that glycoproteins are destabilized by peptide-induced alterations in viral membrane order. We conclude that untimely deployment of fusion machinery by the peptide could render virions less able to engage in on-pathway receptor binding or endosomal fusion. AVP-p may represent a potent, highly specific, novel therapeutic strategy for arenavirus infection. Because the only drug available to combat infection by Lassa virus, a highly pathogenic arenavirus, is toxic and prone to treatment failure, we identified a peptide, AVP-p, derived from the fusion glycoprotein of a nonpathogenic model arenavirus, which demonstrates antiviral activity and no acute cytotoxicity. AVP-p is unique among self-derived inhibitory peptides in that it shows broad, specific activity against pseudoviruses bearing Old and New World arenavirus glycoproteins but not against viruses from other families. Further, the peptide's mechanism of action is highly novel. Biochemical assays and cryo-electron microscopy indicate that AVP-p induces premature activation of viral fusion proteins through membrane perturbance. Peptide treatment, however, does not increase the infectivity of cell-bound virus. We hypothesize that prematurely activated virions are less fit for receptor binding and membrane fusion and that AVP-p may represent a viable therapeutic strategy for arenavirus infection.

Photophysics and Photochemistry of a DNA–Protein Cross-Linking Model: A Synergistic Approach Combining Experiments and Theory

The photophysical and photochemical properties of 5-benzyluracil and 5,6-benzyluracil, the latter produced by photocyclization of the former through irradiation with femtosecond UV laser pulses, are investigated both experimentally and theoretically. The absorption spectra of the two molecules are compared, and the principal electronic transitions involved are discussed, with particular emphasis on the perturbation induced on the two chromophore species (uracil and benzene) by their proximity. The photoproduct formation for different irradiation times was verified with high-performance liquid chromatography and nuclear magnetic resonance measurements. The steady-state fluorescence demonstrates that the fluorescence is a distinctive physical observable for detection and selective identification of 5- and 5,6-benzyluracil. The principal electronic decay paths of the two molecules, obtained through TDDFT calculations, explain the features observed in the emission spectra and the photoreactivity of 5-benzyluracil. The order of magnitude of the lifetime of the excited states is derived with steady-state fluorescence anisotropy measurements and rationalized with the help of the computational findings. Finally, the spectroscopic data collected are used to derive the photocyclization and fluorescence quantum yields. In obtaining a global picture of the photophysical and photochemical properties of the two molecules, our findings demonstrates that the use of 5-benzyluracil as a model system to study the proximity relations of a DNA base with a close-lying aromatic amino acid is valid at a local level since the main characteristics of the decay processes from the excited states of the uracil/thymine molecules remain almost unchanged in 5-benzyluracil, the main perturbation arising from the presence of the close-lying aromatic group.

An Investigation into the Effect of the Structure of Bile Salt Aggregates on the Binding Interactions and ESIHT Dynamics of Curcumin: A Photophysical Approach To Probe Bile Salt Aggregates as a Potential Drug Carrier

This work demonstrates the utilization of bile salt aggregates as a potential biological host system for studying the binding interactions and dynamics of the poorly-water-soluble drug curcumin by means of photophysical techniques. We found that the level of degradation of curcumin is greatly suppressed upon encapsulation into the nanocavities of three different bile salt aggregates. However, NaTC aggregates are more effective to suppress the level of degradation of curcumin than NaCh and NaDC aggregates. We also report the modulation of the photophysical and dynamical properties of curcumin into the nanocavities of bile salt aggregates using steady-state and time-resolved fluorescence spectroscopy. The reduced level of interaction of curcumin with water upon incorporation into the different binding sites of bile salt aggregates results in an enhanced fluorescence intensity along with the blue shift in the emission maxima of curcumin. However, the observation of higher fluorescence quantum yield as well as longer fluorescence lifetime in NaTC aggregates compared to that in NaCh and NaDC aggregates clearly indicates a more effective decrease in the excited-state intramolecular hydrogen atom transfer (ESIHT) mediated nonradiative deactivation of curcumin by the interaction with the anionic headgroup of NaTC. The binding and location of curcumin into the bile salt aggregates has been further confirmed from the steady-state fluorescence anisotropy measurements. In addition, we have shown the effect of addition of salt on the photophysical properties of curcumin in the confined environments of bile salt aggregates. Our results indicate that on addition of salt the time scale of ESIHT process of curcumin in bile salt aggregates is markedly increased.

Comparative Study of the Fatty Acid Binding Process of a New FABP from Cherax quadricarinatus by Fluorescence Intensity, Lifetime and Anisotropy

Fatty acid-binding proteins (FABPs) are small cytosolic proteins, largely distributed in invertebrates and vertebrates, which accomplish uptake and intracellular transport of hydrophobic ligands such as fatty acids. Although long chain fatty acids play multiple crucial roles in cellular functions (structural, energy metabolism, regulation of gene expression), the precise functions of FABPs, especially those of invertebrate species, remain elusive. Here, we have identified and characterized a novel FABP family member, Cq-FABP, from the hepatopancreas of red claw crayfish Cherax quadricarinatus. We report the characterization of fatty acid-binding affinity of Cq-FABP by four different competitive fluorescence-based assays. In the two first approaches, the fluorescent probe 8-Anilino-1-naphthalenesulfonate (ANS), a binder of internal cavities of protein, was used either by directly monitoring its fluorescence emission or by monitoring the fluorescence resonance energy transfer occurring between the single tryptophan residue of Cq-FABP and ANS. The third and the fourth approaches were based on the measurement of the fluorescence emission intensity of the naturally fluorescent cis-parinaric acid probe or the steady-state fluorescence anisotropy measurements of a fluorescently labeled fatty acid (BODIPY-C16), respectively. The four methodologies displayed consistent equilibrium constants for a given fatty acid but were not equivalent in terms of analysis. Indeed, the two first methods were complicated by the existence of non specific binding modes of ANS while BODIPY-C16 and cis-parinaric acid specifically targeted the fatty acid binding site. We found a relationship between the affinity and the length of the carbon chain, with the highest affinity obtained for the shortest fatty acid, suggesting that steric effects primarily influence the interaction of fatty acids in the binding cavity of Cq-FABP. Moreover, our results show that the binding affinities of several fatty acids closely parallel their prevalences in the hepatopancreas of C. quadricarinatus as measured under specific diet conditions.

Charge‐Transfer Interactions in Tris‐Donor–Tris‐Acceptor Hexaarylbenzene Redox Chromophores

Symmetric- and asymmetric hexaarylbenzenes (HABs), each substituted with three electron-donor triarylamine redox centers and three electron-acceptor triarylborane redox centers, were synthesized by cobalt-catalyzed cyclotrimerization, thereby forming compounds with six- and four donor-acceptor interactions, respectively. The electrochemical- and photophysical properties of these systems were investigated by cyclovoltammetry (CV), as well as by absorption- and fluorescence spectroscopy, and compared to a HAB that only contained one neighboring donor-acceptor pair. CV measurements of the asymmetric HAB show three oxidation peaks and three reduction peaks, whose peak-separation is greatly influenced by the conducting salt, owing to ion-pairing and shielding effects. Consequently, the peak-separations cannot be interpreted in terms of the electronic couplings in the generated mixed-valence species. Transient-absorption spectra, fluorescence-solvatochromism, and absorption spectra show that charge-transfer states from the amine- to the boron centers are generated after optical excitation. The electronic donor-acceptor interactions are weak because the charge transfer has to occur predominantly through space. Moreover, the excitation energy of the localized excited charge-transfer states can be redistributed between the aryl substituents of these multidimensional chromophores within the fluorescence lifetime (about 60 ns). This result was confirmed by steady-state fluorescence-anisotropy measurements, which further indicated symmetry-breaking in the superficially symmetric HAB. Adding fluoride ions causes the boron centers to lose their accepting ability owing to complexation. Consequently, the charge-transfer character in the donor-acceptor chromophores vanishes, as observed in both the absorption- and fluorescence spectra. However, the ability of the boron center as a fluoride sensor is strongly influenced by the moisture content of the solvent, possibly owing to the formation of hydrogen-bonding interactions between water molecules and the fluoride anions.

DHA-fluorescent probe is sensitive to membrane order and reveals molecular adaptation of DHA in ordered lipid microdomains

Docosahexaenoic acid (DHA) disrupts the size and order of plasma membrane lipid microdomains in vitro and in vivo. However, it is unknown how the highly disordered structure of DHA mechanistically adapts to increase the order of tightly packed lipid microdomains. Therefore, we studied a novel DHA-Bodipy fluorescent probe to address this issue. We first determined if the DHA-Bodipy probe localized to the plasma membrane of primary B and immortal EL4 cells. Image analysis revealed that DHA-Bodipy localized into the plasma membrane of primary B cells more efficiently than EL4 cells. We then determined if the probe detected changes in plasma membrane order. Quantitative analysis of time-lapse movies established that DHA-Bodipy was sensitive to membrane molecular order. This allowed us to investigate how DHA-Bodipy physically adapted to ordered lipid microdomains. To accomplish this, we employed steady-state and time-resolved fluorescence anisotropy measurements in lipid vesicles of varying composition. Similar to cell culture studies, the probe was highly sensitive to membrane order in lipid vesicles. Moreover, these experiments revealed, relative to controls, that upon incorporation into highly ordered microdomains, DHA-Bodipy underwent an increase in its fluorescence lifetime and molecular order. In addition, the probe displayed a significant reduction in its rotational diffusion compared to controls. Altogether, DHA-Bodipy was highly sensitive to membrane order and revealed for the first time that DHA, despite its flexibility, could become ordered with less rotational motion inside ordered lipid microdomains. Mechanistically, this explains how DHA acyl chains can increase order upon formation of lipid microdomains in vivo.

Single yeast cell vacuolar milieu viscosity assessment by fluorescence polarization microscopy with computer image analysis

This study was undertaken to evaluate the apparent viscosity within the vacuoles of single Saccharomyces cerevisiae cells by steady-state fluorescence anisotropy measurements of quinacrine, using wide-field fluorescence polarization microscopy combined with computer image analysis. Quinacrine was shown to be rather specifically accumulated within the vacuoles of the cells. This accumulation was effectively reversed by ATP depletion of the cells, with no detectable binding of the dye within the vacuoles. Quinacrine fluorescence anisotropy in the sucrose solutions of various viscosities obeyed the Perrin equation. The fluorescence anisotropy of quinacrine was measured in the vacuoles of 39 cells. From cell to cell, this parameter changed in the range 0.032-0.086. Using the Perrin plot as a calibration curve, apparent viscosity values of the vacuolar milieu were calculated for each cell. The population of the cells studied was heterogeneous with regard to vacuolar viscosity, which was in the range 3.5 ± 0.4-14.06 ± 0.64 cP. There was a characteristic distribution of the frequencies of cells with apparent viscosities within certain limits, and cells with viscosity values in the range 5-6 cP were the most frequent. No relationship was found between the sizes of the vacuoles and their apparent viscosities.