μCT Scans Research Articles

Quantification of Root Systems and Soil Macropore Networks Association to Soil Saturated Hydraulic Conductivity in Forested Wetland Soils

Understanding the relationship between root systems, soil macropore networks, and soil hydraulic properties is important to better assess ecosystem health. In this study, treatments were performed in forested wetland soils with different vegetation densities, i.e., large (LWa) and small communities (LWb) of reed (Phragmites australis (Cav.) Trin. ex Steud.). At each plot, three undisturbed PVC cylinders (10 cm in diameter and 50 cm in height) were obtained, and X-ray microtomography (μCT) scanning was used to determine the root and macropore architectures. Results showed that the values of total root length and total root volume at LWa were significantly larger than those at LWb (p < 0.05). Imaged macroporosity, macropore volume, macropore length density, macropore node density, macropore branch density, mean macropore surface area, mean macropore diameter, and mean macropore volume at LWa were significantly larger than those at LWb (p < 0.05), whereas mean macropore length, mean macropore branch length, and mean macropore tortuosity at LWb were larger than those at LWa. Total root length and total root volume were positively correlated with soil saturated hydraulic conductivity. Imaged macroporosity, macropore volume, macropore length density, macropore node density, macropore branch density, mean macropore surface area, mean macropore diameter, and mean macropore volume were positively correlated with soil saturated hydraulic conductivity, whereas mean macropore length, mean macropore branch length, and mean macropore tortuosity were negatively correlated with soil saturated hydraulic conductivity. In conclusion, root systems and soil macropore networks constitute a complex synthesis inside soil environments, and together affect soil hydrological responses.

Imaging of the human cochlea using micro-computed tomography before and after cochlear implantation: comparison with cone-beam computed tomography.

Analysis of cochlear structures and postoperative temporal bone (TB) imaging are gaining importance in the evaluation of cochlear implantation (CI°). Our aims were to explore the microarchitecture of human cochlea using micro-computed tomography (μCT), analyze electrode's placement inside cochlea after CI°, and compare pre-/post-implantation μCT scans with cone-beam CT (CBCT) scans of same TBs. Cadaveric TBs were scanned using μCT and CBCT then underwent CI° using straight electrodes. Thereafter, they underwent again μCT and CBCT-imaging. Ten TBs were studied. μCT allowed visualization of scala tympani, scala vestibuli, basilar membrane, osseous spiral lamina, crista fenestrae, and spiral ligament. CBCT showed same structures except spiral ligament and crista fenestrae. After CI°, μCT and CBCT displayed the scalar location and course of electrode array within the cochlea. There were 7 cases of atraumatic electrode insertion and 3 cases of insertion trauma: basilar membrane elevation, electrode foldover with limited migration into scala vestibuli, and electrode kinking with limited migration into scala vestibuli. Insertion trauma was not correlated with cochlea's size or crista's maximal height but with round window membrane diameter. Resolution of μCT was higher than CBCT but electrode artifacts were similar. μCT was accurate in visualizing cochlear structures, and course and scalar position of electrode array inside cochlea with any possible trauma to cochlea or array. CBCT offers a good alternative to μCT in clinical practice for cochlear imaging and evaluation of CI°, with lower radiation and higher resolution than multi-slice CT. Difficulties related to non-traumatic CI° are multifactorial.

Virtual endocast of late Paleocene Niptomomys (Microsyopidae, Euarchonta) and early primate brain evolution

Paleogene microsyopid plesiadapiforms are among the oldest euarchontans known from relatively complete crania. While cranial endocasts are known for larger-bodied Eocene microsyopine microsyopids, this study documents the first virtual endocast for the more diminutive uintasoricine microsyopids, derived from a specimen of Niptomomys cf. Niptomomys doreenae (USNM 530198) from the late Paleocene of Wyoming. Size estimates of smaller-bodied uintasoricines are similar to those inferred for the common ancestor of Primates, so the virtual endocast of Niptomomys may provide a useful model to study early primate brain evolution. Due to the broken and telescoped nature of the neurocranium of USNM 530198, a μCT scan of the specimen was used to create a 3D model of multiple bone fragments that were then independently isolated, repositioned, and merged to form a cranial reconstruction from which a virtual endocast was extracted. The virtual endocast of Niptomomys has visible caudal colliculi, suggesting less caudal expansion of the cerebrum compared to that of euprimates, but similar to that of several other plesiadapiforms. The part of the endocast representing the olfactory bulbs is larger relative to overall endocast volume in Niptomomys (8.61%) than that of other known plesiadapiforms (∼5%) or euprimates (<3.5%). The petrosal lobules (associated with visual stabilization) are relatively large for a Paleocene placental mammal (1.66%). The encephalization quotient of Niptomomys is relatively high (range = 0.35–0.85) compared to that of Microsyops (range = 0.32–0.52), with the upper estimates in the range of values calculated for early euprimates. However, this contrast likely relates in part to the small size of the taxon, and is not associated with evidence of neocortical expansion. These findings are consistent with a model of shifting emphasis in primate evolution toward functions of the cerebrum and away from olfaction with the origin of euprimates.

Andrographis paniculata ameliorates estrogen deficiency-related osteoporosis by directing bone marrow mesenchymal stem cell fate.

Although Andrographis paniculata (AP) exhibits various biological functions such as anticancer, anti-inflammatory, antimalarial, antimicrobial, antioxidant, cardioprotective and immunomodulatory, its role in estrogen deficiency-related osteoporosis remains unclear. Ovariectomy (OVX)-induced estrogen deficiency-related osteoporotic mouse models and sham mouse models were established using 8-week-old female C57BL/6J mice. Micro-computed tomography (µCT) scanning was performed to assess the skeletal phenotype. The differentiation potential of bone marrow mesenchymal stem cells (BMSCs) from the OVX and sham groups was assessed by osteogenic or adipogenic induction medium in vitro. To verify the effects of AP, alizarin red S (ARS) staining, alkaline phosphatase (ALP) staining and oil red O (ORO) staining, reverse transcription assay and quantitative real-time polymerase chain reaction were applied to detect the lineage differentiation ability of BMSCs. µCT scanning showed that AP treatment attenuated the osteoporotic phenotype in OVX-induced estrogen deficiency-related osteoporotic mice. The results of ARS staining, ALP staining, ORO staining and quantitative real-time polymerase chain reaction indicated that BMSCs from OVX-induced osteoporotic mice displayed a significant reduction in osteogenic differentiation and an increase in adipogenic differentiation, which could be reversed by AP treatment. Our findings suggested that AP regulated the differentiation potential of BMSCs and ameliorated the development of estrogen deficiency-related osteoporosis, which might be an effective therapeutic method for estrogen deficiency-related osteoporosis.

Histomorphometry and μCT scan analysis of osteoporosis in spayed female dogs

Both humans and small animals suffer from similar metabolic and structural diseases that impact the musculoskeletal system; however, instead of studying animal disease in its own right, animals are more often used as models for research into various human ailments, such as osteoporosis. There are few studies indicating that animals may suffer from osteoporosis, which raises the question of why small animals, which we believe to be equally susceptible, receive so little attention. With this research, we hope to draw the attention of researchers to the fact that the examination of animals for this disease is just as important as the examination of humans; human osteoporosis research receives a great deal of attention, while animals and their health are neglected. We aimed to analyze the bone volume fraction (BV/TV) and thickness of first (L1) and second (L2) lumbar vertebrae samples from five cadavers using histomorphometric analysis. In addition, we aimed to investigate one cadaver using microcomputed tomography (μCT) imaging. The L1 and L2 vertebrae from five dog carcasses were used to evaluate the BV/TV and the trabecular thicknesses. We used precise sampling criteria, and also developed a methodological approach to the study of the vertebrae. Using semi-automated methods, we performed histomorphometric analysis and μCT data analysis. We used five dog cadavers in this research. During the histomorphometry study, we observed that the lowest L1 BV/TV ratio was 7.88% and the highest was 23.08%. The L2 vertebrae BV/TV ranged from 11.58% to 23.7%. The L1 and L2 lumbar trabeculae thicknesses were also measured. L1's smallest trabecula was 17.34 microns and its largest was 31.88. The L2 vertebrae trabecula thickness was 18.76-30.75 microns. BV/TV and trabecular thickness were positively correlated (and vice versa). The two-tailed p value was less than 0.00001. This difference is statistically significant. After μCT analysis, we discovered regions in the vertebral body with low porosity; these cavities are usually filled with connective tissue. The bone tissue in these areas is more vulnerable, meaning fracture risk has increased. Animals should not just be considered as models for osteoporosis in humans, but also as potential patients. A single test, such as histomorphometry, may not be sufficient; more advanced technology, such as μCT, is required, since it reveals the pores that make the vertebral column more brittle and susceptible to fracture.

E15.5 Mouse Embryo Micro-CT Using a Bruker Skyscan 1172 Micro-CT.

X-ray computed microtomography (µCT) is a powerful tool to reveal the 3D structure of tissues and organs. Compared with the traditional sectioning, staining, and microscopy image acquisition, it allows a better understanding of the morphology and a precise morphometric analysis. Here, we describe a method for 3D visualization and morphometric analysis by µCT scanning of the embryonic heart of iodine-stained E15.5 mouse embryos.

Evolution of gliding in squirrel-related rodents (Mammalia: Sciuromorpha) did not induce a new optimum on the cortical thickness of the scapular glenoid fossa.

Many of the squirrel-related rodents (i.e., Sciuromorpha) are tree-dwelling species known to be very agile climbers. This taxon also includes the most diverse clade of gliding (aerial) mammals that likely descended from a non-gliding arboreal ancestor and evolved a patagium (i.e., a gliding membrane) to increase gliding performance. Glides can cover distances of up to 150 m and landing is typically accomplished by stalling the patagium to reduce impact velocity. It remains unclear if this behavior suffices to keep stresses on the locomotor apparatus similar to those experienced by their arboreal relatives or whether gliding behavior increases landing forces and stresses. The sparsely available support reaction force data are ambiguous, but bone microstructure is highly adaptable to changes in loading regime and likely provides insights into this question. Using μCT scans, we compared the cortical thickness of the glenoid fossa of the shoulder joint between arboreal and aerial Sciuromorpha using evolutionary model comparison, while also accounting for regional differences of the glenoid fossa. We did not find any differences between these locomotor behaviors, irrespective of the glenoid region. These findings agree with previous analyses of the microstructure of the femur in Sciuromorpha. We discuss different aspects that could explain the similarity in cortical thickness. According to our analysis of glenoid cortical thickness the loading regime appears not to have changed after the evolution of gliding locomotion, likely due to adjustments in landing performance.

The association between paraspinal muscle parameters and vertebral pedicle microstructure in patients undergoing lumbar fusion surgery.

Lumbar fusion surgery has become a standard procedure in spine surgery and commonly includes the posterior placement of pedicle screws. Bone quality is a crucial factor that affects pedicle screw purchase. However, the relationship between paraspinal muscles and the bone quality of the pedicle is unknown. The aim of the study was to determine the relationship between paraspinal muscles and the ex vivo bony microstructure of the lumbar pedicle. Prospectively, collected data of patients undergoing posterior lumbar fusion for degenerative spinal conditions was analyzed. Pre-operative lumbar magnetic resonance imaging (MRI) scans were evaluated for a quantitative assessment of the cross-sectional area (CSA), functional cross-sectional area (fCSA), and the proportion of intramuscular fat (FI) for the psoas muscle and the posterior paraspinal muscles (PPM) at L4. Intra-operative bone biopsies of the lumbar pedicle were obtained and analyzed with microcomputed tomography (µCT) scans. The following cortical (Cort) and trabecular (Trab) bone parameters were assessed: bone volume fraction (BV/TV), trabecular number (Tb.N), trabecular thickness (Tb.Th), connectivity density (CD), bone-specific surface (BS/BV), apparent density (AD), and tissue mineral density (TMD). A total of 26 patients with a mean age of 59.1years and a mean BMI of 29.8kg/m2 were analyzed. fCSAPPM showed significant positive correlations with BV/TVTrab (ρ = 0.610; p < 0.001), CDTrab (ρ = 0.679; p < 0.001), Tb.NTrab (ρ = 0.522; p = 0.006), Tb.ThTrab (ρ = 0.415; p = 0.035), and ADTrab (ρ = 0.514; p = 0.007). Cortical bone parameters also demonstrated a significant positive correlation with fCSAPPM (BV/TVCort: ρ = 0.584; p = 0.002; ADCort: ρ = 0.519; p = 0.007). FIPsoas was negatively correlated with TMDCort (ρ = - 0.622; p < 0.001). This study highlights the close interactions between the bone microstructure of the lumbar pedicle and the paraspinal muscle morphology. These findings give us further insights into the interaction between the lumbar pedicle microstructure and paraspinal muscles.

New specimen and redescription of Anisodontosaurus greeri (Moenkopi Formation: Middle Triassic) and the spatiotemporal origins of Trilophosauridae

ABSTRACT Anisodontosaurus greeri is an enigmatic small-bodied tetrapod with a heterodont dentition from the Holbrook Member of the Moenkopi Formation (Middle Triassic) of Arizona (U.S.A.). The evolutionary relationships of this taxon have long been debated and remain uncertain. Using micro-computed tomography (µCT) scans we redescribe the holotype of Anisodontosaurus greeri (UCMP 37804), as well as an additional specimen (MNA.V.1478) that had been informally referred to this taxon. Our new data reveal hidden details of the dentition (i.e., ankylothecodonty and absence of replacement teeth) that, in combination with the tricuspid and mediolaterally expanded crowns, support a referral of both specimens to the archosauromorph clade Trilophosauridae. The referral of MNA.V.1478 to Anisodontosaurus greeri is supported by the unique anatomy of the highly differentiated dentition (i.e., ‘figure of 8’-shaped premolariforms in occlusal views; mesiodistally short tooth row; presence of a distal ‘molariform’ crown). Comparison of Anisodontosaurus greeri with other trilophosaurids highlights marked similarities with Variodens inopinatus from the Upper Triassic deposits of the U.K. Our cladistic analyses confirm these observations, and recover, for the first time, two distinct lineages within Trilophosauridae: one geologically long-lived and comprising Anisodontosaurus and Variodens; and one comprising Tricuspisaurus, Trilophosaurus spp., and Spinosuchus. These results imply that: (i) Anisodontosaurus is one of the oldest known trilophosaurids worldwide and the oldest in North America; (ii) trilophosaurids achieved a broad distribution at low latitudes within western Pangea by the Middle Triassic; (iii) small body sizes were more common than previously thought among trilophosaurids.

Processing of Aluminum Alloy 6182 with High Scanning Speed in LPBF by In-Situ Alloying with Zr and Ti Powder

The demand for high-strength aluminum alloys for the laser powder bed fusion (LPBF) process is still growing. However, to date, the crack susceptibility of conventional alloys as well as the high prices for specially developed alloys are the main obstacles for the use of high-strength aluminum alloys for LPBF. In this paper, crack-free LPBF samples with a relative density &gt;99.9% were processed from AlMgSi1Zr (6182 series alloy) powder, to which 0.5 wt.-% Zr and 0.5 wt.-% Ti were added via mechanical mixing. No hot cracks were found in the µCT scans. Moreover, a fully equiaxed microstructure with a mean size of the α-Al grains of 1.2 µm was observed in the as-built parts. Al3(Zr,Ti) particles were observed, acting as efficient heterogeneous grain refiners for α-Al by building a semi-coherent interface. Unmolten Ti and Zr particles with sizes up to 80 µm were found in the α-Al phase. The resulting fine-grained microstructure led to a tensile strength of 329 ± 4 MPa and a total elongation at a break of 11.4 ± 0.9% after solution heat treatment, quenching in water, and subsequent artificial ageing.

Long Bones Exhibit Adaptive Responses to Chronic Low-Dose-Rate Ionizing Radiation despite its Lifespan-Shortening and Carcinogenic Effects on C57BL/6 Mice.

Ionizing radiation (IR) is a well-known carcinogen. High-dose-rate (HDR) IR is known to damage long bones (in terms of mass and structure), but the relationships among dose rates (particularly low-dose-rate [LDR] IR), long-bone condition, cancer incidence, and lifespan shortening remain elusive. The aim of this study was to elucidate the effects of LDR-IR on long-bone condition by comparing the long-term consequences of HDR- and LDR-IR exposure in mice. We utilized micro-computed tomography (μCT) scans of the long bones at similar ages (mean 77-96 weeks) to compare mice receiving approximately equivalent total doses of internal LDR-IR or external HDR-IR starting at 4 weeks of age, and their respective control groups. The lifespan-shortening effects of LDR-IR and HDR-IR were similar in these mixed-sex cohorts. Notably, compared to HDR-IR mice, mice internally exposed to chronic LDR-IR with continuous hypohematopoiesis showed a significantly higher trabecular bone connective density [femur: 247% (p= 0.0042), tibia: 169% (p= 0.0005)] and midshaft cortical bone thickness/area (femur: 130% [p= 0.0079]/120% [p= 0.021], tibia: 148% [p= 0.0004]/129% [p= 0.002]). Consistent with this result, when comparing 26-32 weeks post-IR with 2-8 weeks post-IR, compared to HDR-IR-treated mice, LDR-IR-treated mice exhibited higher levels of an osteoblast marker (OPG; p= 0.67 for HDR-IR, p= 0.068 for LDR-IR) and lower levels of an osteoclast marker (CTX-I; p= 0.0079 for HDR-IR, p= 0.72 for LDR-IR) despite significantly higher levels of inflammatory markers (CCL2 and CXCL1; p= 0.36-0.8 for HDR-IR, p= 0.013-0.041 for LDR-IR). These results suggest that long bones under chronic LDR-IR stress may exhibit an adaptive response to stresses such as chronic inflammation associated with IR-induced lifespan shortening. © 2022 The Authors. JBMR Plus published by Wiley Periodicals LLC on behalf of American Society for Bone and Mineral Research.

Compression failure of porous ceramics: A computational study about the effect of volume fraction on damage evolution and failure

The work describes a numerical method to study compression failure of porous ceramics in relation to its volume fraction. The microstructure of an alumina-based foam material manufactured by mechanical stirring of a slurry is studied here. A finite element-based compression failure simulation of a real microstructure obtained from micro computed tomography (μCT) scans is conducted. A recently developed microstructure reconstruction algorithm is utilized to generate 3D artificial microstructures statistically equivalent to the real one obtained from μCT. The accuracy of the reconstruction procedure is established by comparing the simulated effective compression stress-strain behaviour of the reconstructed microstructure with that of the real one along with the experimentally measured results. The effect of sample size on the mean and variability of compression strength is studied by computing effective stress-strain curves for varying sizes of the reconstructed microstructures. Further, artificial microstructures of porous ceramics with different volume fractions are reconstructed along with computing effective stress-strain behaviour to establish relationship between ceramic content (volume fraction) and compression strength of this material. The failure modes of the microstructures with different volume fractions are studied by analysing failure site locations and their evolution with loading. The results are compared with the analytical models and the experimental observations available in the literature.

Implant deformation and implant-abutment fracture resistance after standardized artificial aging: An in vitro study.

Zirconia abutments have been widely adopted in clinical implant practice. The unique mechanical properties of zirconia may significantly affect the long-term prognosis of implant treatments. The purpose of this study was to investigate the influence of abutment material on implant deformation and fracture resistance of internal conical connection implant-abutment complexes of two diameters after standardized artificial aging. Thirty original abutments (one-piece titanium, one-piece zirconia, zirconia with alloy base) with two diameters (regular, narrow) were connected to internal conical connection implants and subjected to a standardized artificial aging process consisting of thermal cycling and mechanical cyclic loading. Microcomputed tomography (μCT) scans of implant bodies were performed before and after aging. 3-dimensional images of implant bodies were generated from the μCT scans and aligned for before and after aging to calculate the volumetric deformation amount. Finally, fracture resistance was measured using a mechanical static loading test for the surviving aged and 30 brand-new specimens. All specimens survived artificial aging. No significant difference in implant deformation was found in the regular groups (p=0.095). In narrow groups, the one-piece zirconia group showed significantly less deformation (p < 0.0001). For fracture resistance, no significant decrease was observed after aging in any group (p > 0.05). One-piece zirconia abutments showed significantly lower strength than the other two materials for both diameters (p < 0.0001). In the regular diameter system, abutment material had no significant influence on the tested mechanical property degradation after simulated long-term oral use. The mechanical performance of narrow diameter one-piece zirconia abutments differed from the other two materials. For optimal performance, one-piece zirconia abutments should be adopted only in anterior regions.

Experimental investigation of hydrogen-carbonate reactions via computerized tomography: Implications for underground hydrogen storage

The underground hydrogen storage (UHS) in depleted hydrocarbon reservoirs, aquifers, and saline caverns is regarded as a vital component of hydrogen economy value-chains, meant to tackle carbon emissions and global warming. The caprock integrity and storage capacity of the carbonate formations can be altered by the reaction between the injected hydrogen and the calcite/dolomite minerals during UHS. However, experimental investigations of hydrogen-calcite/dolomite reactions at underground storage temperature are rarely reported in literature. Thus, we conducted X-ray computed micro-tomography (μCT) scans of limestone and dolomite cores before and after pressurization with hydrogen for 75 days at 700 psi and 75 °C. For the first time, a significant calcite expansion was observed and led to reduction in storage capacity (i.e., effective porosity) by 47%. However, the storage capacity of the dolomite rock slightly increased (∼6%) because the grain expansion effects canceled out the dissolution effects. The study suggests that reduction in storage capacity of carbonate formation due to hydrogen reactivity with calcite is possible during UHS in carbonate formations. Thus, hydrogen reactivity with carbonate minerals should be evaluated to de-risk hydrogen storage projects in carbonate formations.

A fully automated deep learning pipeline for micro-CT-imaging-based densitometry of lung fibrosis murine models

Idiopathic pulmonary fibrosis, the archetype of pulmonary fibrosis (PF), is a chronic lung disease of a poor prognosis, characterized by progressively worsening of lung function. Although histology is still the gold standard for PF assessment in preclinical practice, histological data typically involve less than 1% of total lung volume and are not amenable to longitudinal studies. A miniaturized version of computed tomography (µCT) has been introduced to radiologically examine lung in preclinical murine models of PF. The linear relationship between X-ray attenuation and tissue density allows lung densitometry on total lung volume. However, the huge density changes caused by PF usually require manual segmentation by trained operators, limiting µCT deployment in preclinical routine. Deep learning approaches have achieved state-of-the-art performance in medical image segmentation. In this work, we propose a fully automated deep learning approach to segment right and left lung on µCT imaging and subsequently derive lung densitometry. Our pipeline first employs a convolutional network (CNN) for pre-processing at low-resolution and then a 2.5D CNN for higher-resolution segmentation, combining computational advantage of 2D and ability to address 3D spatial coherence without compromising accuracy. Finally, lungs are divided into compartments based on air content assessed by density. We validated this pipeline on 72 mice with different grades of PF, achieving a Dice score of 0.967 on test set. Our tests demonstrate that this automated tool allows for rapid and comprehensive analysis of µCT scans of PF murine models, thus laying the ground for its wider exploitation in preclinical settings.

Identification and analysis of fibers in ultra-large micro-CT scans of nonwoven textiles using deep learning

Fibrous materials play a significant role in many industries, such as lightweight automotive materials, filtration, or as constituents of hygiene products. The properties of fibrous materials are governed to a large extent by their microstructure. One way to access the microstructure is to use micro-Computed Tomography (micro-CT). Completely characterizing the microstructure requires geometrically characterizing each individual fiber. To make this possible, one must identify the individual fibers. Our method achieves this by finding in segmented µCT scans the centerline of all individual fibers. It uses a convolutional neural network that was trained on automatically generated synthetic training data. From the centerlines, analytic descriptions of the individual fibers are constructed. These analytic representations allow detailed insights into the statistics of the geometric properties of the fibrous material, such as the fibers’ orientation, length, or curvature. The method is validated on artificial data sets and its usefulness demonstrated on a very large micro-CT scan of a nonwoven composed of long fibers with random curvature.

A New Species of Sternopygus (Gymnotiformes: Sternopygidae) from the Atlantic Coast of the Guiana Shield

Sternopygus sabaji, new species, is described from the Atlantic drainages of the Guiana Shield region of South America using traditional methods of morphometrics and meristics and microcomputed tomography (µCT) scans for osteological analysis. The new species is diagnosed from all other species of Sternopygus by the lack of dentition on the anteroventral surface of the endopterygoid and by the possession of a wider mouth. It further differs from its congeners by the following combination of characters: reduced humeral spot with low-contrast and poorly defined margins, possession of a light-colored mid-lateral stripe along posterior portion of lateral line, possession of 1–3 dark saddle-like markings along dorsum of smaller individuals, and a relatively low precaudal vertebrae count. This work provides the first description of a species of Sternopygus that is endemic to the Guiana Shield, joining S. astrabes and S. macrurus in elevating the species richness of the clade in that region to three species and the total number of valid Sternopygus to ten species.

Oil Recovery Performance by Surfactant Flooding: A Perspective on Multiscale Evaluation Methods

Chemical-enhanced oil recovery (cEOR) is a class of techniques commonly used to extract hydrocarbon fluids from reservoir rocks beyond conventional waterflooding. Surfactants are among the chemical agents employed in a cEOR process, as they aid in enhancing oil recovery by lowering the oil–water interfacial tension (IFT) and altering the rock wettability toward less oil-wet conditions. Understanding the flow characteristics and mechanisms involved during surfactant flooding helps improve the performance of injected surfactants and results in higher oil recovery. The objective of this review is to outline the recent applications of the different methods employed to understand the behavior and mechanisms involved during surfactant-enhanced oil recovery. The review begins with a general background highlighting the basic characteristics of surfactants and the main mechanisms by which they exert their influence. Recent studies conducted to investigate the oil recovery performance through different methods are then presented, including traditional coreflooding experiments, microfluidics studies, and oil recovery through sand packs. The methodology of the analysis and the interpretation of the data obtained from the different oil recovery tests, including oil recovery factor, pressure data, and relative permeability, are also described. Pore-scale analysis and imaging methods including nuclear magnetic resonance (NMR), magnetic resonance imaging (MRI), and X-ray medical and microcomputed tomography (μCT) scanning and their applicability in assessing the recovery performance are described. Finally, a few examples of field monitoring methods for surfactant flooding are highlighted. This review provides knowledge of the different multiscale evaluation methods and their applicability during surfactant flooding.

Methods for Studying Appendicular Skeletal Biology in Axolotls.

The axolotl is a great model for studying cartilage, bone and joint regeneration, fracture healing, and evolution. Stainings such as Alcian Blue/Alizarin Red have become workhorses in skeletal analyses, but additional methods complement the detection of different skeletal matrices. Here we describe protocols for studying skeletal biology in axolotls, particularly Alcian Blue/Alizarin Red staining, microcomputed tomography (μCT) scan and live staining of calcified tissue. In addition, we describe a method for decalcification of skeletal elements to ease sectioning.

Water flow through bone: Neutron tomography reveals differences in water permeability between osteocytic and anosteocytic bone material

Vertebrate bones are made of a nanocomposite consisting of water, mineral and organics. Water helps bone material withstand mechanical stress and participates in sensation of external loads. Water diffusion across vertebrae of medaka (bone material lacking osteocytes) and zebrafish (bone material containing osteocytes) was compared using neutron tomography. Samples were measured both wet and following immersion in deuterated-water (D2O). By quantifying H+ exchange and mutual alignment with X-ray µCT scans, the amount of water expelled from complete vertebra was determined. The findings revealed that anosteocytic bone material is almost twice as amenable to D2O diffusion and H2O exchange, and that unexpectedly, far more water is retained in osteocytic zebrafish bone. Diffusion in osteocytic bones (only 33 % – 39 % water expelled) is therefore restricted as compared to anosteocytic bone (∼ 60 % of water expelled), presumably because water flow is confined to the lacunar-canalicular network (LCN) open-pore system. Histology and Raman spectroscopy showed that anosteocytic bone contains less proteoglycans than osteocytic bone. These findings identify a previously unknown functional difference between the two bone materials. Therefore, this study proposes that osteocytic bone retains water, aided by non-collagenous proteins, which contribute to its poroelastic mechano-transduction of water flow confined inside the LCN porosity.