Burullus Lagoon is a brackish water lake in the Nile Delta of Egypt. This study assumed that changes in environmental conditions affect phytoplankton species composition and their biochemical structure. The biochemical content of phytoplankton is considered as an initiatory study at Lake Brullus. Winter versus summer cruises from twelve sites representing the eastern, middle and western main lake basins were performed during 2018. Phytoplankton revealed a seasonally variation which attained the lowest value during winter season (72300 Unit/L) and the highest levels during summer season (88700 Unit/L). This is coincided with high total protein content (2692.5 mg/l) in summer. Chlorophyceae was the first major class by (37.9 %) followed by Bacillariophyceae (29.31%), then Cyanophyceae (20.7%), while, Euglenophyceae and Dinophyceae are rare classes constitute (8.63% and 3.4% respectively). Middle of the lake recorded the maximum total biochemical contents in winter (870.5, 57.6 and 6.1 mg/l of proteins, carbohydrates and lipids, respectively), this results corresponding to the elevation of total phytoplankton density at this central basin (29200 Unit/L), especially the Chlorophyceae (13700 Unit/L). The western basin had an optimum total biochemical structure in summer (1909.1, 55.4 and 6.5 mg/l) of proteins, carbohydrates and lipids, respectively, where phytoplankton was increased to 56000 Unit/L. The middle and western basins lied in mesotrophic to eutrophic state according to the Q index. Excessive nutrients loads by drainage water into the lagoon lead to significant pronounced effect in the phytoplankton biodiversity raise the urgent need for lagoon management strategies.
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