Level Of Genetic Similarity Research Articles

AFLP Fingerprinting Analysis of Citrus Cultivars and Wild Accessions from Oman Suggests the Presence of Six Distinct Cultivars

Abstract A study was conducted to evaluate genetic relatedness of 27 citrus cultivars and 6 wild citrus accessions using AFLP fingerprinting. The 27 citrus cultivars belonged to Citrus sinensis, C. aurantifolia, C. aurantium, C. paradise, C. reticulata, C. limon, C. latifolia, C. maxima, C. limettoides, C. limetta, C. medica and C. Jambhiri. The wild cultivars were obtained from Oman while the other cultivars originated from Oman and other countries. AFLP analysis using 4 primer pair combinations resolved 910 polymorphic alleles. All citrus cultivars and accessions had low genetic diversity (H = 0.0281 to 0.1300), with the percent polymorphic loci ranging from 8 to 35%. Populations of the six wild citrus accessions showed a very low level of genetic diversity (< 0.0700). Cluster analysis of the 33 cultivars and accessions showed that they share a high level of genetic similarity (81‒99%; mean = 92%). The six wild accessions clustered into two main clusters, with the analysis indicating that the six wild accessions may make up six distinct cultivars. The study provides information on the phylogeny of citrus cultivars and citrus diversity in Oman, a country through which citrus moved in the past from Asia to different African and European countries. In addition, it shows that some distinct citrus cultivars are present in this part of the world.

Genetic variabilities and relationships among some egyptian Aspergillus spp. based on microscopic characters, isozyme profiles and random amplification of polymorphic DNA

Twelve Aspergillus spp. were isolated from the Egyptian soils and were studied morphologically and microscopically. Isozyme profiles and random amplified polymorphic DNA (RAPD) were also employed for determination of the genetic relationship among the tested Aspergillus spp. Results of RAPD revealed genetic similarity level above 80% between A. terreus and A. aculeatus. The species A. niger, A. candidus, A. terreus and A. aculeatus were joined with a similarity level of 65%. Unique bands were displayed by certain fungi and can be taken as a positive marker for isolate identification. Five isozyme systems; peroxidase, alcohol dehydrogenase, α esterase, β esterase and superoxide dismutase were studied to detect the genetic variabilities among the tested isolates. Subsequently, comparing the three dendrograms which belong to morphological characters, isoymes and RAPD revealed a great relationship between A. terreus and A. niveus from one side and A. candidus and A. terreus from the other side.

Whole genome sequencing of toxigenic Clostridium difficile in asymptomatic carriers: insights into possible role in transmission

Estimates of the prevalence of asymptomatically carried Clostridium difficile in elderly patients in long-term care range from 0% to 51%. Asymptomatic carriage is possibly a risk factor for the development of infection, and there is ongoing debate surrounding the role of asymptomatic carriage in transmission. To investigate the prevalence of asymptomatic carriage amongst patients residing in intermediate care (bedded) facilities (ICBFs), and to investigate whether asymptomatically carried C.difficile strains contribute to nosocomial C.difficile infection (CDI). Stools were collected from eligible asymptomatic patients in ICBFs, and a subset was also processed from symptomatic patients accessing primary or secondary care outside of ICBFs. All samples were cultured for C.difficile, and resulting colonies were processed through whole genome sequencing. In total, 151 asymptomatic patients were sampled, 22 of which were positive for C.difficile through stool culture, representing a carriage rate of 14.6%. Sequencing of these isolates, alongside 14 C.difficile polymerase chain reaction and culture-positive isolates from symptomatic individuals, revealed that all asymptomatic patients were carrying toxigenic C.difficile, and these strains were genetically similar to those from symptomatic patients. This small study of asymptomatic carriage revealed a rectal asymptomatic carriage rate of 14.6% in patients nursed in ICBFs, and a high level of genetic similarity of these strains to those recovered from symptomatic patients. As such, asymptomatic carriers may be important for the transmission of symptomatic CDI, although it is acknowledged that this study was small, and many other factors govern whether C.difficile is carried asymptomatically or causes symptoms.

Use of rapidly evolving molecular markers to distinguish species and clarify range uncertainties in the spearfishes (Istiophoridae, Tetrapturus)

Despite broad spatial distributions in the Atlantic, Pacific, and Indian oceans, relatively little is known about spearfishes (family Istiophoridae, genus Tetrapturus) due to their pelagic nature and relative scarcity. The limited biological understanding of spearfishes includes uncertain taxonomic relationships complicated by conserved morphology, thus specific identification relies heavily on geographic location of capture. Previous phylogenetic studies incorporating a limited number of loci and few representatives of each species have been unable to consistently resolve the four currently recognized species comprising Tetrapturus. In the present study, we surveyed 14 nuclear microsatellite loci and the mitochondrial DNA control region across relatively large numbers of samples per species to genetically discriminate spearfish species. Molecular data resolved roundscale spearfish (n = 89) (Tetrapturus georgii Lowe, 1841) and Mediterranean spearfish (n = 12) (Tetrapturus belone Rafinesque, 1810) as genetically distinct groups. Longbill spearfish (n = 79) (Tetrapturus pfluegeri Robins and de Sylva, 1963) and shortbill spearfish (n = 29) (Tetrapturus angustirostris Tanaka, 1915) were not consistently resolved. A single individual collected in the western central Atlantic Ocean off Brazil assigned to shortbill spearfish and likely represents a vagrant. Additionally, a spearfish sampled from the Indian Ocean off eastern South Africa was morphologically identified as a longbill spearfish, and the molecular profile of this specimen was consistent with the morphological identification. Our study represents the most extensive molecular evaluation of the spearfishes to date. Results reported here underscore the substantial level of genetic similarity between longbill and shortbill spearfishes, and suggest high-resolution genomic methods may be required to unambiguously resolve these species.

Genomic history of the Sardinian population.

The population of the Mediterranean island of Sardinia has made important contributions to genome-wide association studies of complex disease traits and, based on ancient DNA (aDNA) studies of mainland Europe, Sardinia is hypothesized to be a unique refuge for early Neolithic ancestry. To provide new insights on the genetic history of this flagship population, we analyzed 3,514 whole-genome sequenced individuals from Sardinia. We find Sardinian samples show elevated levels of shared ancestry with Basque individuals, especially samples from the more historically isolated regions of Sardinia. Our analysis also uniquely illuminates how levels of genetic similarity with mainland aDNA samples varies subtly across the island. Together, our results indicate within-island sub-structure and sex-biased processes have substantially impacted the genetic history of Sardinia. These results give new insight to the demography of ancestral Sardinians and help further the understanding of sharing of disease risk alleles between Sardinia and mainland populations.

Genetic similarity analysis of Vanda tricolor Lindley var. Suavis orchids using OPU 03 and OPU 16 RAPD marker

The purpose of this research is to understand the genetic similarity level of Vanda tricolor Lindley var. Suavis orchid plants that were regenerated from seeds of the same fruit/pod produced by self-pollination. The seeds were sown on New Phalaenopsis (NP) in vitro culture medium supplemented with 15 % coconut water (CW). Genetic similarity analysis was performed by PCR-based Random Amplification of Polymorphic DNA (PCR-RAPD) technique. The analysis was carried out at 16 months old regenerated plants after sowing (mas). Seven DNA samples were isolated using a modified Castillo method. It was then used to amplify (PCR) OPU 3 and OPU 16 primers. The electropherogram of PCR result was then converted to binary data and analysed using NTSYSpc software version 2.02. The genetic analysis result showed that the genetic similarity of 7 tested plants ranged between 0.4–0.8.

RAPD based molecular analysis genetic diversity of Ornithoptera croesus found in Bacan Island, Indonesia

Mas'ud A, Corebima AD, Amin M, Rohman F. 2018. RAPD based molecular analysis genetic diversity of Ornithoptera croesus found in Bacan Island, Indonesia. Biodiversitas 19: 1273-1279. The endemic butterfly commonly known as birdwing butterfly found in Bacan island (Ornithoptera croesus) was first discovered by Wallace in 1859. The O. croesus hotspot is a nature preserve located at various altitudes around Sibela mountain. The O. croesus belongs to macrolepidoptera which is famous for their variety of body colors and typical morphology identified in female and male found at various altitude places. This study aimed to examine the genetic diversity of O. croesus at some different altitude spots in Sibela mountain using PCR-RAPD molecular analysis. The result of the DNA amplification showed high polymorphism in O. croesus (84,81). The clustering pattern indicated that O. croesus ♂ 400 meters above sea level (m asl.) and O. croesus ♀ 400 m asl. had the highest level of genetic similarity, while the lowest level of genetic similarity was observed in O. croesus ♀ 800 m asl. and O. croesus ♀ 20 m asl. On the basis of these findings, clustering pattern showed that the highest level similarity could also be found in species that live in the same altitude.

Molecular insights into genetic diversity and population dynamics of five medicinal Eulophia species: a threatened orchid taxa of Africa.

Genetic diversity existing amongst five Eulophia orchid species were assessed using start codon targeted polymorphism (SCoT) and inter-retrotransposon amplified polymorphism (IRAP) markers. A total of 12 SCoT and 5 IRAP markers revealed an average of 63% genetic variability [SCoT = 63.87; IRAP = 64.95%] amongst the five Eulophia species investigated. The genetic similarities were assessed using both UPGMA and Bayesian approaches which indicated identical clustering patterns at a genetic similarity level of 50%. Analysis of molecular variance (AMOVA) revealed the presence of a significant degree of genetic variability, mostly compartmentalized within the species level. Amongst the five assessed Eulophia species, E. parviflora was the most genetically diverse representative whereas E. welwitschii was found to be least diverse based on a comparative assessment of various population genetic parameters like Nei's gene diversity (h) and Shannon's information index (I) with an overall gene flow value greater than 1. In order to evaluate the comparative marker efficiency, SCoT and IRAP marker data were subjected to various benchmark analyses like marker index, resolving power, polymorphic index content, multiplex ratio and effective multiplex ratio which revealed the robustness of both the marker techniques in assessment of genetic diversity. The present report provides the first molecular insights into the aspects of inter and intra specific genetic variability in medicinally as well as horticulturally important Eulophia species along with addressing their conservation concerns. In a nutshell, the present approach is simple, rapid and cost effective and can be extended for analysis of genetic diversity of other related plant species.

Genetic Diversity of Persian Ecotypes of Indian Walnut (Aeluropus littoralis (Gouan) Pari.) by AFLP and ISSR Markers

Indian walnut Aeluropus littoralis (Gouan) Pari, well known for its salt tolerance and forage quality, is a perennial monocot grass from Chlorideae tribe that shows a high potential to become an important genetic model. Although, Aeluropus germplasm is very rich in Iran; but is still unexplored. In this study, 20 ecotypes of A. littoralis were gathered from different geographic zones and a set 16 primers (ISSRs-AFLPs combined) was used for genetic diversity evaluation. A total of 635 fragments and 594 polymorphic fragments were produced (93.5%) and modest levels of genetic similarity were found (ranging from 0.38 to 0.71) among ecotypes. The results showed an equal competition between the two markers on polymorphism detection, so both molecular techniques were able to distinguish the A. littoralis ecotypes. Furthermore, Dendrogram based on both the Bayesian and PCoA analysis showed a clear discrimination and significant variation among ecotypes; however, molecular clustering indicated a weak concordance with geographical grouping. The amount of molecular diversity revealed by molecular markers for A. littoralis in this study can be exploited for pasture conservation programs and new forage crop development.

Multi-Environment Evaluation and Genetic Characterisation of Common Bean Breeding Lines for Organic Farming Systems

It is recognised that one of the main causes for the relative low yields under organic conditions is the use of modern cultivars which are bred for high-input management systems. The work described here aimed to study and test possible breeding strategies to produce cultivars of common bean for organic agriculture. To this purpose, crosses between a traditional Italian landrace named “Gnocchetto” and a cultivar were carried out. The F1 plants obtained were either backcrossed or self-fertilised and the obtained materials subjected to selection for quality traits at different development stages. The resulting lines were tested under four different environmental conditions for three years in order to determine their potential performance. The resulting data were analysed using a Multi-Environment Trial Analysis (MET) approach and different visualisations of the GGE biplot were generated. Furthermore, to assess the level of genetic similarity, the lines were characterised using 25 Simple Sequence Repeat (SSR) molecular markers. Results showed that the breeding approach applied allowed to select lines with the same technological and agronomic characteristics as commercially available cultivars, but with different adaptation abilities that make them suitable for organic agriculture.

First detection and genomics analysis of KPC-2-producing Citrobacter isolates from river sediments.

The wide spread of carbapenemase-producing Enterobacteriaceae (CPE) in the environment is an emerging environmental issue with potentially-serious public health implications. However, carbapenemase-producing Citrobacter from environment has rarely been investigated. Here we report the isolation and comparative genomics of carbapenemase-producing Citrobacter isolates from river sediment in China. Potential CPE was isolated by selective MacConkey agar plates containing 2 mg/L meropenem. The presence of carbapenemase genes was detected by PCR and sequencing. The clonal relatedness of Klebsiella pneumoniae carbapenemase (KPC-2)-producing Citrobacter isolates was assessed by pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing. Plasmid analysis of KPC-2-producing Citrobacter isolates was performed by S1-PFGE, Southern blotting, and whole genome sequencing. A total of four KPC-2-producing Citrobacter and three Aeromonas isolates were recovered from 54 sediment cultures of Shifeng River. Notably, all KPC-producing isolates were isolated from sampling sites near a waste water treatment plant. Antimicrobial susceptibility testing showed that three of the four sequenced isolates (C1710, C191, and C196) resistant to multiple antibiotics. Genotyping and pan-genome analyses revealed that the C191 and C196 C.freundii isolates exhibited a high level of genetic similarity. Plasmid analysis confirmed that the blaKPC-2 gene is located on either IncF or IncN3 plasmids in all isolates. The blaKPC-2 gene of C1710, C181 and C191 was successfully transferred with E.coli EC600 as the recipient strain. In silico analysis further suggested that pKPC-191 is a novel IncF plasmid, with 99% identity to two previously described IncFII plasmids at 71% coverage. We report here the presence of diverse conjugative blaKPC-2 plasmids from environmental Citrobacter isolates, which poses the possible dissemination of antimicrobial resistance into clinical isolates. To our knowledge, this is the first study to culture and characterize KPC-2-producing Citrobacter isolates from river sediments in China.

Development of SNP-Based Markers to Identify Colletotrichum gossypii in Upland Cotton.

Colletotrichum gossypii is a causal agent of anthracnose in upland cotton (Gossypii hirsutum). C. gossypii belongs to the C. gloeosporioides species complex. However, the high level of genetic similarity among the species within the C. gloeosporioides species complex makes the development of a diagnostic assay for C. gossypii challenging. Furthermore, the spore size and cultural characteristics of C. gossypii from different geographical areas can vary. In this study, we examined the morphological variance, growth pattern, and pathogenicity of C. gossypii and developed a molecular diagnostic assay to detect C. gossypii in cotton plants from different regions of China. To overcome any ambiguity in morphological and pathogenic characteristics, a set of primers targeting the β-tubulin (TUB) gene of C. gossypii was designed. Single-nucleotide polymorphisms (SNP) were used to identify C. gossypii at the species level using DNA sequence alignments of the TUB gene. The SPSCG/F and SPSCG/R primer pair only amplified C. gossypii, and was able to amplify C. gossypii in mixtures of other Colletotrichum spp., even when DNA concentrations were up to 10 times lower than that of the other species. This is the first report of the development of SNP-based markers for the specific identification of C. gossypii.

Genetic Diversity Analysis in 27 Tomato Accessions Using Morphological and Molecular Markers

Genetic diversity is the most important aspect in tomato breeding activities. Better assessment on the diversity of the collected accessions will come up with better result of the cultivar development. This study aimed at analyzing the genetic diversity of 27 tomato accessions by morphological and molecular markers. Twenty seven accessions collected from various regions of Indonesia were planted in the field and evaluated for their morphological traits, and RAPD analyzed for their molecular markers. The UPGMA clustering analyzes, elaborating the combination of morphological and molecular data, indicated that the tomato accessions could be grouped into 5 major groups with 70 % genetic similarity levels. Current study indicated that although many accessions came from different locations, they congregated into the same group. Cherry, Kudamati 1 and Lombok 3 were the farthest genetic distant accessions to the others. Those three genotypes will be the most valuable accessions, when they were crossed with other accessions, for designing a prospective breeding program in the future.

Immunogenetic Characteristics of Holstein Cattle Reared on Sakhalin

Research into the blood groups among the Holstein cattle reared in Sakhalin oblast was carried out. The antigenic structure of the erythrocytes in blood of 2248 animals on four farms—Sovkhoz Yuzhno- Sakhalinskii Corporation, Timiryazevskii Corporation, Sokolovskii Agricultural Production Cooperative, and Sovkhoz Zarechnoe Corporation—was determined. The analysis of the distribution of the factor antigens was performed. On average, it recorded both a high frequency of occurrence of antigens A2, G2, G3, O2, Y2, E′2, E′3, O′, Q′, C1, C2, E, W, X2, F, J, L, H′, and Z and a low frequency of occurrence of antigens Z′, P, Q, T2, I′, P′, Y′, B″, C′, M, U, and U″ H″. A high level of genetic similarity between the animals was revealed, which can be associated with the conditions for formation and adaptation of the Holstein population on Sakhalin Island. The obtained results may be used to choose the breeds for future perspectives in animal crossbreeding and to design the breeding programs.

Genetic Diversity in the Camel Tick <i>Hyalomma dromedarii</i> (Acari: Ixodidae) Based on Mitochondrial Cytochrome c Oxidase Subunit I (COI) and Randomly Amplified Polymorphic DNA Polymerase Chain Reaction (RAPD-PCR)

Hyalomma dromedarii ticks are important disease vectors to camels in the UAE and worldwide. Ticks can be identified using DNA-based techniques. In addition, such techniques could be utilized to study the intraspecific genetic diversity in tick populations. In this study, the genetic diversity of four H. dromedarii populations was investigated using mitochondrial cytochrome c oxidase subunit I (COI) gene and randomly amplified polymorphic DNA polymerase chain reaction (RAPD-PCR). The results showed that both of the aforementioned techniques produced similar grouping patterns. Moreover, they revealed that the four tick populations had high levels of genetic similarity. However, one population was slightly different from the three other populations. The current study demonstrated that H. dromedarii ticks in the UAE are very similar at the genetic level and that investigating more locations and screening larger numbers of ticks could reveal larger genetic differences.

Genetic Diversity Analysis of Forty Pearl Millet (<i>Pennisetum glaucum</i> (L.) R. Br) Accessions from Sudan Using Agronomical Descriptors and DNA Molecular Markers

Morphological descriptors and Random Amplification of Polymorphic DNA (RAPD) technique were used to assess the genetic variation among and within forty Pennesitum glaucum accessions from Sudan. Accessions were collected from 30 villages representing Darfur, North Kordofan, South Kordofan, and Blue Nile states. 64 amplified fragments were distinguished using ten primers. 63 bands were polymorphic among the forty accessions with an average of 6.3 polymorphic bands per primer. Low level of genetic similarity was observed (4% - 43%). The PhiPT (analogue of FST fixation index) value for genetic variability obtained over the four regions was 0.169 with high significance (P = 0.01). AMOVA analysis showed higher variance components within regions (80%) than among regions (20%). The two dendrograms obtained by Random Amplification of Polymorphic DNA (RAPD) data; and morphological data based on 26 descriptors did not fit together. PCA (Principal coordinate’s analysis) showed geographic structuring of pearl millet according to its growing regions in Sudan.

SSR fingerprinting of 203 sweetpotato (Ipomoea batatas (L.) Lam.) varieties

Simple sequence repeat (SSR) markers have been shown to be a powerful tool for varieties identification in plants. However, SSR fingerprinting of sweetpotato varieties has been a little reported. In this study, a total of 1294 SSR primer pairs, including 1215 genomic-SSR and 79 expressed sequence tag (EST)-SSR primer pairs, were screened with sweetpotato varieties Zhengshu 20 and Luoxushu 8 and their 2 F1 individuals randomly sampled, and 273 and 38 of them generated polymorphic bands, respectively. Four genomic-SSR and 3 EST-SSR primer pairs, which showed good polymorphism, were selected to amplify 203 sweetpotato varieties and gave a total of 172 bands, 85 (49.42%) of which were polymorphic. All of the 203 sweetpotato varieties showed unique fingerprint patterns, indicating the utility of SSR markers in variety identification of this crop. Polymorphism information content (PIC) ranged from 0.5824 to 0.9322 with an average of 0.8176. SSR-based genetic distances varied from 0.0118 to 0.6353 with an average of 0.3100 among these varieties. Thus, these sweetpotato varieties exhibited high levels of genetic similarity and had distinct fingerprint profiles. The SSR fingerprints of the 203 sweetpotato varieties have been successfully constructed. The highly polymorphic SSR primer pairs developed in this study have the potential to be used as core primer pairs for variety identification, genetic diversity assessment and linkage map construction in sweetpotato and other plants.

Assessment of molecular and epigenetic changes in the albinism of Agave angustifolia Haw

Albinism in plants is a rare phenomenon that occurs in nature and is characterized by the total or partial loss of photosynthetic pigments. Although progress has been made in understanding the nature of this phenomenon, the precise causes and biological basis are still unexplored. Here, we study the genetic and epigenetic differences between green (G), variegated (V) and albino (A) A. angustifolia Haw. plantlets obtained by in vitro propagation in order to present new insights into albinism from a plant system that offers a unique set of biological phenotypic characteristics. Low transcript levels of genes involved in carotenoids and photosynthesis such as PSY, PDS, LCYƐ, rubS, PEPCase and LHCP suggest a disruption in these processes in albino plants. Due to a high level of genetic similarity being found between the three phenotypes, we analyzed global DNA methylation and different histone marks (H3K4me2, H3K36me2, H3K9ac, H3K9me2 and H3K27me3). Although no significant differences in global 5-methyl deoxicytidine were found, almost a 2–4.5-fold increase in H3K9ac was observed in albino plants in comparison with variegated or green plants, suggesting a change in chromatin compaction related to A. angustifolia albinism.

Preparation for emergence of an Eastern European porcine reproductive and respiratory syndrome virus (PRRSV) strain in Western Europe: Immunization with modified live virus vaccines or a field strain confers partial protection

The porcine reproductive and respiratory syndrome virus (PRRSV) causes huge economic losses for the swine industry worldwide. In the past several years, highly pathogenic strains that lead to even greater losses have emerged. For the Western European swine industry, one threat is the possible introduction of Eastern European PRRSV strains (example Lena genotype 1.3) which were shown to be more virulent than common Western resident strains under experimental conditions. To prepare for the possible emergence of this strain in Western Europe, we immunized piglets with a Western European PRRSV field strain (Finistere: Fini, genotype 1.1), a new genotype 1 commercial modified live virus (MLV) vaccine (MLV1) or a genotype 2 commercial MLV vaccine (MLV2) to evaluate and compare the level of protection that these strains conferred upon challenge with the Lena strain 4 weeks later. Results show that immunization with Fini, MLV1 or MLV2 strains shortened the Lena-induced hyperthermia. In the Fini group, a positive effect was also demonstrated in growth performance. The level of Lena viremia was reduced for all immunized groups (significantly so for Fini and MLV2). This reduction in Lena viremia was correlated with the level of Lena-specific IFNγ-secreting cells. In conclusion, we showed that a commercial MLV vaccine of genotype 1 or 2, as well as a field strain of genotype 1.1 may provide partial clinical and virological protection upon challenge with the Lena strain. The cross-protection induced by these immunizing strains was not related with the level of genetic similarity to the Lena strain. The slightly higher level of protection established with the field strain is attributed to a better cell-mediated immune response.

Low level of genetic differentiation among populations of the rare species Allium regelianum A.K. Becker ex Iljin from the Volgograd region detected by ISSR-analysis

Background. Knowledge of genetic diversity within and among populations of rare and endangered plants species is practically important for conservation management. Molecular markers are useful tools for analysis of genetic diversity. In this study ISSR-analysis of rare endemic species Allium regelianum which grows in the Volgograd region was performed for the first time.
 Materials and Methods. A total of 93 samples from the 11 populations were collected and used in analysis. Six primers used in ISSR-analysis. Data analysis was performed using the GenAlEx 6.41, POPGEN 1.32, PAST 3.11 and STRUCTURE 2.3.1 programs.
 Results. A total of 109 ISSR-fragments were scored of which 87 (79.8%) were polymorphic. Comparatively high level of intrapopulation diversity was estimated for the population of the area near Krasnoyarskii khutor, Serafimovichskii administrative region, and for the population of Khrenovatyi Liman, Nikolaevskii administrative region of Volgograd Oblast. Genetic similarity index among populations ranged from 0.88 to 0.96. Genetic differentiation among populations of A. regelianum, GST was 0.284, only. Analysis of molecular variance showed that genetic heterogeneity of A. regelianum 83% was attributed to differences within populations and 17% occurred among populations. Principal coordinate analysis and analysis of populations structure (with the used of STRUCTURE program) found no clear differentiation among populations.
 Conclusion. The estimation of intra- and interpopulation diversity of A. regelianum was performed. ISSRs detected high levels of genetic similarity within the populations of A. regelianum and low level of genetic differentiation among populations.