Larger Precursor Research Articles

Characterizing Distributions of Tensile Strength and Crack Precursor Size to Evaluate Filler Dispersion Effects and Reliability of Rubber.

Undispersed filler agglomerates or other substantial inclusions/contaminants in rubber can act as large crack precursors that reduce the strength and fatigue lifetime of the material. To demonstrate this, we use tensile strength (stress at break, σb) data from 50 specimens to characterize the failure distribution behavior of carbon black (CB) reinforced styrene-butadiene rubber (SBR) compounds. Poor mixing was simulated by adding a portion of the CB late in the mixing process, and glass beads (microspheres) with 517 μm average diameter were introduced during milling to reproduce the effects of large inclusions. The σb distribution was well described with a simple unimodal Weibull distribution for the control compound, but the tensile strengths of the poor CB dispersion material and the compounds with the glass beads required bimodal Weibull distributions. For the material with the lowest level of glass beads—corresponding to less than one microsphere per test specimen—the bimodal failure distribution spanned a very large range of σb from 13.7 to 22.7 MPa in contrast to the relatively narrow σb distribution for the control from 18.4 to 23.8 MPa. Crack precursor size (c0) distributions were also inferred from the data, and the glass beads introduced c0 values in the 400 μm range compared to about 180 μm for the control. In contrast to σb, critical tearing energy (tear strength) was unaffected by the presence of the CB agglomerates and glass beads, because the strain energy focuses on the pre-cut macroscopic crack in the sample during tear testing rather than on the microscopic crack precursors within the rubber. The glass beads were not detected by conventional filler dispersion measurements using interferometric microscopy, indicating that tensile strength distribution characterization is an important complementary approach for identifying the presence of minor amounts of large inclusions in rubber.

Analysis of the influence of dienitro on co and nox emissions in diesel public transport buses with egr and scr systems

Transport of people and goods has always been associated with the generation of some pollution, whether atmospheric, sound or visual. Managing the urban environment presents a major challenge: preserving environmental resources and also ensuring decent living conditions for the current population and for future generations. In the era of motorized and carbonized transport, vehicles are the main source of emission of atmospheric pollutants, mainly in large urban centers and important precursors of ozone. An important advance in minimizing vehicle emissions was the introduction of cleaner and additive fuels into the Brazilian market. The aim of this study was to evaluate the influence of the use of 0.15% dienitro on S50 Diesel in engines with EGR (Exhaust Gas Recirculation) and S10 Diesel in engines with SCR (Selective Catalytic Reduction) and EGR system. The tests were performed with a gas analyzer directly on the exhaust of vehicles with engine speed of 1300 rpm. Results show CO emission reductions of 72.8, 37.9, 15.7% and NOx emission reductions of 48.0, 48.5 and 31.0%, respectively for the S50 EGR, S10 SCR and S10 EGR system. This additive has a slight increase of 1 or 1.5 points in cetane number, low vaporization enthalpy (energy to vaporize) and high combustion enthalpy, ie, Dienitro increased cetane number, faciliting the start of combustion and reducing CO. On the other hand, a fuel that releases less energy during combustion consequently produces lower temperatures within the combustion chamber, ie additives with lower combustion enthalpy have lower NOx emissions.

DPF is a cell-density sensing factor, with cell-autonomous and non-autonomous functions during Dictyostelium growth and development

BackgroundCellular functions can be regulated by cell-cell interactions that are influenced by extra-cellular, density-dependent signaling factors. Dictyostelium grow as individual cells in nutrient-rich sources, but, as nutrients become depleted, they initiate a multi-cell developmental program that is dependent upon a cell-density threshold. We hypothesized that novel secreted proteins may serve as density-sensing factors to promote multi-cell developmental fate decisions at a specific cell-density threshold, and use Dictyostelium in the identification of such a factor.ResultsWe show that multi-cell developmental aggregation in Dictyostelium is lost upon minimal (2-fold) reduction in local cell density. Remarkably, developmental aggregation response at non-permissive cell densities is rescued by addition of conditioned media from high-density, developmentally competent cells. Using rescued aggregation of low-density cells as an assay, we purified a single, 150-kDa extra-cellular protein with density aggregation activity. MS/MS peptide sequence analysis identified the gene sequence, and cells that overexpress the full-length protein accumulate higher levels of a development promoting factor (DPF) activity than parental cells, allowing cells to aggregate at lower cell densities; cells deficient for this DPF gene lack density-dependent developmental aggregation activity and require higher cell density for cell aggregation compared to WT. Density aggregation activity co-purifies with tagged versions of DPF and tag-affinity-purified DPF possesses density aggregation activity. In mixed development with WT, cells that overexpress DPF preferentially localize at centers for multi-cell aggregation and define cell-fate choice during cytodifferentiation. Finally, we show that DPF is synthesized as a larger precursor, single-pass transmembrane protein, with the p150 fragment released by proteolytic cleavage and ectodomain shedding. The TM/cytoplasmic domain of DPF possesses cell-autonomous activity for cell-substratum adhesion and for cellular growth.ConclusionsWe have purified a novel secreted protein, DPF, that acts as a density-sensing factor for development and functions to define local collective thresholds for Dictyostelium development and to facilitate cell-cell communication and multi-cell formation. Regions of high DPF expression are enriched at centers for cell-cell signal-response, multi-cell formation, and cell-fate determination. Additionally, DPF has separate cell-autonomous functions for regulation of cellular adhesion and growth.

Study of the effect of the Dienitro additive on the NOx and CO emissions in buses of collective transport to Diesel S-50 EGR and S-10 with SCR and EGR systems

PurposeTransport of people and goods has always been associated with the generation of some form of pollution, whether atmospheric, sound or visual. Managing the urban environment presents a major challenge: preserving environmental resources and also ensuring decent living conditions for the current population and for future generations. In the era of motorized and carbonized transport, vehicles are the main source of emission of atmospheric pollutants, mainly in large urban centers and important precursors of ozone. An important advance in minimizing vehicle emissions was the introduction of cleaner and additive fuels into the Brazilian market. The purpose of this paper is to study the effect of the Dienitro additive on the NOx and CO emissions in buses of collective transport, Diesel S-50 exhaust gas recirculation (EGR) and S-10 with selective catalytic reduction (SCR) and EGR systems. Measurements of CO and NOx gas emissions were carried out using a gas analyzer in S50 and S10 diesel buses with an EGR and SCR systems from a company operating in the collective transport of Biguaçu.Design/methodology/approachIn this study, 20 measurements were performed without additives and 20 measurements with additivation in each bus, making it possible to calculate the average emission rate of CO and NOx, pollutant gases with toxic effect.FindingsThe usage of Dienitro additive in diesel engines resulted in a significant reduction in the emission of polluting gases, carbon monoxide (CO) and nitrogen oxide (NOx), thus being efficient in reducing the emissions of these gases.Originality/valueThe Dienitro additive was first tested on diesel engines by public transport buses, and there is great potential for reducing the emission of toxic gases.

Macrocycle-Directed Construction of Tetrahedral Anion-π Receptors for Nesting Anions with Complementary Geometry.

Manipulation of the emerging anion-π interactions in a highly cooperative manner through sophisticated host design represents a very challenging task. In this work, unprecedented tetrahedral anion-π receptors have been successfully constructed for complementary accommodation of tetrahedral and relevant anions. The synthesis was achieved by a macrocycle-directed approach by using large macrocycle precursors bearing four reactive sites, which enabled a kinetic-favored pathway and afforded the otherwise inaccessible tetrahedral cages in considerable yields. Crystal structure suggested that the tetrahedral cages have an enclosed three-dimensional cavity surrounded by four electron-deficient triazine faces in a tetrahedral array. The complementary accommodation of a series of tetrahedral and relevant anions including BF4 - , ClO4 - , H2 PO4 - , HSO4 - , SO4 2- and PF6 - was revealed by ESI-MS and DFT calculations. Crystal structures of ClO4 - and PF6 - complexes showed that the anion was nicely encapsulated within the tetrahedral cavity with up to quadruple cooperative anion-π interactions by an excellent shape and size match. The strong anion-π binding was further confirmed by negative ion photoelectron spectroscopy measurements.

Delimiting the Function of the C-Terminal Extension of the Escherichia coli [NiFe]-Hydrogenase 2 Large Subunit Precursor.

The active site of all [NiFe]-hydrogenases (Hyd) has a bimetallic NiFe(CN)2CO cofactor that requires the combined action of several maturation proteins for its biosynthesis and insertion into the precursor form of the large subunit of the enzyme. Cofactor insertion is an intricately controlled process, and the large subunit of almost all Hyd enzymes has a C-terminal oligopeptide extension that is endoproteolytically removed as the final maturation step. This extension might serve either as one of the recognition motifs for the endoprotease, as well as an interaction platform for the maturation proteins, or it could have a structural role to ensure the active site cavity remains open until the cofactor is inserted. To distinguish between these alternatives, we exchanged the complete C-terminal extension of the precursor of Escherichia coli hydrogenase 2 (Hyd-2) for the C-terminal extension of the Hyd-1 enzyme. Using in-gel activity staining, we demonstrate clearly that this large subunit precursor retains its specificity for the HybG maturation chaperone, as well as for the pro-HybC-specific endoprotease HybD, despite the C-terminal exchange. Bacterial two-hybrid studies confirmed interaction between HybD and the pro-HybC variant carrying the exchanged C-terminus. Limited proteolysis studies of purified precursor and mature HybC protein revealed that, in contrast to the precursor, the mature protein was protected against trypsin attack, signifying a major conformational change in the protein. Together, our results support a model whereby the function of the C-terminal extension during subunit maturation is structural.

IL-33 Is a Cell-Intrinsic Regulator of Fitness during Early B Cell Development.

IL-33 is an IL-1 family member protein that is a potent driver of inflammatory responses in both allergic and nonallergic disease. This proinflammatory effect is mediated primarily by extracellular release of IL-33 from stromal cells and binding of the C-terminal domain of IL-33 to its receptor ST2 on targets such as CD4+ Th2 cells, ILC2, and mast cells. Notably, IL-33 has a distinct N-terminal domain that mediates nuclear localization and chromatin binding. However, a defined in vivo cell-intrinsic role for IL-33 has not been established. We identified IL-33 expression in the nucleus of progenitor B (pro-B) and large precursor B cells in the bone marrow, an expression pattern unique to B cells among developing lymphocytes. The IL-33 receptor ST2 was not expressed within the developing B cell lineage at either the transcript or protein level. RNA sequencing analysis of wild-type and IL-33-deficient pro-B and large precursor B cells revealed a unique, IL-33-dependent transcriptional profile wherein IL-33 deficiency led to an increase in E2F targets, cell cycle genes, and DNA replication and a decrease in the p53 pathway. Using mixed bone marrow chimeric mice, we demonstrated that IL-33 deficiency resulted in an increased frequency of developing B cells via a cell-intrinsic mechanism starting at the pro-B cell stage paralleling IL-33 expression. Finally, IL-33 was detectable during early B cell development in humans and IL33 mRNA expression was decreased in B cell chronic lymphocytic leukemia samples compared with healthy controls. Collectively, these data establish a cell-intrinsic, ST2-independent role for IL-33 in early B cell development.

Tin oxide nanostructure fabrication via sequential infiltration synthesis in block copolymer thin films

Tin oxide (SnO2) nanostructures are attractive for sensing, catalysis, and optoelectronic applications. Here we investigate the fabrication of SnOx nanostructures through sequential infiltration synthesis (SIS) in block copolymer (BCP) film templates. While the growth of metal and metal oxides within polymers and BCP films via SIS has been demonstrated until now using small precursors such as trimethyl aluminum and diethyl zinc, we hypothesize that SIS can be performed using larger precursors and demonstrate SnOx SIS with tetrakis(dimethylamino)tin (TDMASn) and hydrogen peroxide. Tuning the SIS reaction and BCP chemistry resulted in highly ordered, polystyrene-block-poly(2-vinyl pyridine) (P2VP)-templated porous SnOx - AlOx and SnOx nanostructures. Detailed investigation using in-situ microbalance, high resolution electron microscopy, elemental analysis and infra-red spectroscopy shows that SnOx can directly grow within P2VP homopolymer and BCP films. Simultaneously with the growth, SnOx SIS process also contributes to the polymer etch. Performing SnOx SIS with pretreatment of a single AlOx SIS cycle increases the SnOx growth and protects the BCP template from etching. This is the first report of SnOx SIS opening a pathway for additional tetrakis-based organometallic precursors to be utilized in growth processes within polymers.

Maturation of atypical ribosomal RNA precursors in Helicobacter pylori.

In most bacteria, ribosomal RNA is transcribed as a single polycistronic precursor that is first processed by RNase III. This double-stranded specific RNase cleaves two large stems flanking the 23S and 16S rRNA mature sequences, liberating three 16S, 23S and 5S rRNA precursors, which are further processed by other ribonucleases. Here, we investigate the rRNA maturation pathway of the human gastric pathogen Helicobacter pylori. This bacterium has an unusual arrangement of its rRNA genes, the 16S rRNA gene being separated from a 23S-5S rRNA cluster. We show that RNase III also initiates processing in this organism, by cleaving two typical stem structures encompassing 16S and 23S rRNAs and an atypical stem–loop located upstream of the 5S rRNA. Deletion of RNase III leads to the accumulation of a large 23S-5S precursor that is found in polysomes, suggesting that it can function in translation. Finally, we characterize a cis-encoded antisense RNA overlapping the leader of the 23S-5S rRNA precursor. We present evidence that this antisense RNA interacts with this precursor, forming an intermolecular complex that is cleaved by RNase III. This pairing induces additional specific cleavages of the rRNA precursor coupled with a rapid degradation of the antisense RNA.

Alzheimer’s Disease Prevention and Treatment: Case for Optimism

A paradigm shift is under way in the Alzheimer's field. A view of Alzheimer's disease, AD, prevailing until now, the old paradigm, maintains that it is initiated and driven by the overproduction and extracellular accumulation of beta-amyloid, Aβ; a peptide assumed to be derived, both in health and disease, solely by proteolysis of its large precursor, βAPP. In AD, according to this view, Aβ overproduction-associated neurodegeneration begins early, accumulates throughout the lifespan, and manifests symptomatically late in life. A number of drugs, designed within the framework of exceptionality of the βAPP proteolytic/secretory pathway in Aβ production in Alzheimer's disease, achieved spectacular successes in treatment, even the reversal, of AD symptoms in animal models. Without exception, they all exhibited equally spectacular failures in human clinical trials. This paradigm provides few causes for optimism with regard to prevention and treatment of AD. In its context, the disease is considered untreatable in the symptomatic phase; even prodromal cases are assumed too advanced for treatment because Aβ-triggered damages have been accumulating for preceding decades, presumably starting in the early twenties and, to be effective, this is when therapeutic intervention should commence and continue for life. The new paradigm does not dispute the seminal role of Aβ in AD but posits that beta-amyloid produced in the βAPP proteolytic/secretory pathway causes AD in humans no more than it does in non-human mammals that share this pathway with humans, accumulate Aβ as they age, but do not develop the disease. Alzheimer's disease, according to this outlook, is driven by the AD-specific pathway of Aβ production, independent of βAPP and absent in animals. Its activation, late in life, occurs through accumulation, via both cellular uptake of secreted Aβ and neuronal retention of a fraction of beta-amyloid produced in the βAPP proteolytic pathway, of intraneuronal Aβ, which triggers mitochondrial dysfunction. Cellular stresses associated with mitochondrial dysfunction, or, probably, the integrated stress response, ISR, elicited by it, activate an AD-specific Aβ production pathway. In it, every conventionally produced βAPP mRNA molecule potentially serves repeatedly as a template for production of severely 5'-truncated mRNA encoding C99 fragment of βAPP, the immediate precursor of Aβ that is processed in a non-secretory pathway, apparently in a neuron-specific manner. The resulting intraneuronally retained Aβ augments mitochondrial dysfunction, which, in turn, sustains the activity of the βAPP mRNA amplification pathway. These self-propagating Aβ overproduction/mitochondrial dysfunction mutual feedback cycles constitute the engine that drives AD and ultimately triggers neuronal death. In this paradigm, preventive treatment can be initiated any time prior to commencement of βAPP mRNA amplification. Moreover, there are good reasons to believe that with a drug blocking the amplification pathway, it would be possible not only to preempt the disease but also stop and reverse it even when early AD symptoms are already manifested. Thus, the new paradigm introduces a novel theory of Alzheimer's disease. It explains the observed discordances, determines defined therapeutic targets, provides blueprints for a new generation of conceptually distinct AD models and specifies design of a reporter for the mRNA amplification pathway. Most importantly, it offers detailed guidance and tangible hope for prevention of the disease and its treatment at the early symptomatic stages.

Investigations into PoyH, a promiscuous protease from polytheonamide biosynthesis.

Polytheonamides are the most extensively modified ribosomally synthesized and post-translationally modified peptide natural products (RiPPs) currently known. In RiPP biosynthesis, the processed peptide is usually released from a larger precursor by proteolytic cleavage to generate the bioactive terminal product of the pathway. For polytheonamides, which are members of a new RiPP family termed proteusins, we have recently shown that such cleavage is catalyzed by the cysteine protease PoyH acting on the precursor PoyA, both encoded in the polytheonamide biosynthetic gene cluster. We now report activity for PoyH under a variety of reaction conditions for different maturation states of PoyA and demonstrate a potential use of PoyH as a promiscuous protease to liberate and characterize RiPPs from other pathways. As a proof of concept, the identified recognition motif was introduced into precursors of the thiopeptide thiocillin and the lanthipeptide lichenicidin VK1, allowing for their site-specific cleavage with PoyH. Additionally, we show that PoyH cleavage is inhibited by PoyG, a previously uncharacterized chagasin-like protease inhibitor encoded in the polytheonamide gene cluster.

Assembly and early maturation of large subunit precursors

The eukaryotic ribosome is assembled through a complex process involving more than 200 factors. As preribosomal RNA is transcribed, assembly factors bind the nascent pre-rRNA and guide its correct folding, modification, and cleavage. While these early events in the assembly of the small ribosomal subunit have been relatively well characterized, assembly of the large subunit precursors, or pre-60S, is less well understood. Recent structures of nucleolar intermediates of large subunit assembly have shed light on the role of many early large subunit assembly factors, but how these particles emerge is still unknown. Here, we use the expression and purification of truncated pre-rRNAs to examine the initial assembly of pre-60S particles. Using this approach, we can recapitulate the early recruitment of large subunit assembly factors mainly to the domains I, II, and VI of the assembling 25S rRNA.

Polar-Group Activated Isospecific Coordination Polymerization of ortho-Methoxystyrene: Effects of Central Metals and Ligands.

Stereoselective polymerization of polar vinyl monomers has been a long-standing challenge because the employed transition-metal catalysts are easily poisoned by polar groups of monomers. In this contribution, a series of β-diketiminato rare-earth metal complexes 1-5 (L1-5 Ln(CH2 SiMe3 )2 (THF)n , Ln=Gd-Lu, Y, and Sc) were successfully synthesized. In combination with AliBu3 and [Ph3 C][B(C6 F5 )4 ], complexes 1 c(Tb)-1 g(Tm) exhibited high activities and excellent isoselectivities for the polymerization of ortho-methoxystyrene (oMOS), in which, the polar methoxy group of oMOS did not poison but activated the polymerization through σ-π chelation to the active species together with the vinyl group. Moreover, the large Gd-attached precursor 1 b showed a higher activity, albeit with a slightly decreased isoselectivity. The small Sc-attached precursor 1 i was completely inert. Meanwhile, the spatial steric arrangement and the coordination mode of the β-diketiminato ligand could clearly affect and even block oMOS polymerization. This work sheds new light on the coordination polymerization of polar monomers.

Template-Free Electrodeposition of Dendritic Metal Blades for Efficient Flexible Manganese Oxide Electrode

Flexible manganese oxide electrodes with fernlike structure have been fabricated by in-situ oxidation of well-aligned dendritic metal Mn blades, which are electrodeposited template-freely on metal wire from aqueous electrolyte. The dendritic Mn blades can serve as both efficient current collector with large specific area and precursor for in-situ oxide formation. Related setup design and electrochemical conditions for dendrites deposition were optimized, while a modified dendrite-growth model was also proposed. The flexible and thin fernlike electrode with a capacitance of 653 mF·cm−2 @ 2 mA·cm−2, have exhibited a potential for metal dendrites on promoting the energy density of wearable energy devices, rather than a common hazard in electroplating and battery industries.

DeltaMass: Automated Detection and Visualization of Mass Shifts in Proteomic Open-Search Results.

Routine identification of thousands of proteins in a single LC-MS experiment has long become the norm. With these vast amounts of data, more rigorous treatment of modified forms of peptides becomes possible. "Open search", a protein database search with a large precursor ion mass tolerance window, is becoming a popular method to evaluate possible sets of post-translational and chemical modifications in samples. The extraction of statistical information about the modification from peptide search results requires additional effort and data processing, such as recalibration of masses and accurate detection of precursors in MS1 signals. Here we present a software tool, DeltaMass, which performs kernel-density-based estimation of observed mass shifts and allows for the detection of poorly resolved mass deltas. The software also maps observed mass shifts to known modifications from public databases such as UniMod and augments them with additionally generated possible chemical changes to the molecule. Its interactive graphical interface provides an effective option for the visual interrogation of the data and the identification of potentially interesting mass shifts or unusual artifacts for subsequent analysis. However, the program can also be used in fully automated command-line mode to generate mass-shift peak lists as well.

Effects of large aromatic precursors on soot formation in turbulent non-premixed sooting jet flames

In this paper, we computationally study the effects of large Polycyclic Aromatic Hydrocarbons (PAH) (more than two aromatic rings) on soot yield and distribution in turbulent flames, when they are considered as nucleating species for soot formation. This is examined in two turbulent non-premixed sooting jet flames using ethylene and a jet fuel (JP-8) surrogate as fuels. For each flame, two Large-Eddy Simulations (LES) are performed with two different soot nucleation strategies. In the first strategy, a range of PAH from naphthalene to cyclopenda[cd]pyrene are considered as nucleating species, while in the second strategy, naphthalene is considered as the only soot nucleating species and the effects of larger PAH are represented entirely by naphthalene. Flamelet-based chemistry-tabulation is used for the major thermochemical quantities, such as density, temperature, and major species mass fractions. Turbulence-chemistry interactions for PAH are accounted for by transporting their mass fractions and using a recently developed PAH relaxation model for their source term closure. The effects of large PAH on soot are highlighted by comparing the PAH profiles, soot nucleation rate, and soot volume fraction distributions obtained from both simulations for each test flame. These results are also compared against experimental measurements, when available. From these comparisons, it is first shown that naphthalene is predominantly formed along the flame centerline, and larger PAH species with more than two aromatic rings are primarily formed away from the centerline. Further, it is found that these larger PAH species only contribute to around of the overall soot nucleation rate along the flame centerline but their contributions are more substantial (up to ) away from the centerline. Finally, it is shown that representing the effects of these large PAH species by naphthalene leads to an under-prediction of around for the soot volume fraction magnitude along the flame centerline. Away from the centerline, this under-prediction can be as much as 100

Synthesis of TiO2 on SnO2 bicomponent system and investigation of its structure and photocatalytic activity

Photocatalytically visible light active thin SnO2/TiO2 bicomponent coatings with SnO2 underlayer, were deposited by spray pyrolysis. XRD, AFM, XPS and DRS analyses were used to characterize their morphology, phase and chemical composition, structure and band gap width. The model wastewater contaminant was diazo dye and the photocatalytic properties were tested by discoloration oxidation reaction. The photocatalytic activity of the SnO2/TiO2 system depends on the SnO2 precursor solution parameters: sprayed volume and the concentration of the SnO2 solution. It was revealed that the bicomponent coatings with SnO2 underlayer, which has been prepared at large spray solution volume and low tin precursor concentration exhibit increased photocatalytic activity. The combination of several factors ensures high rate of the oxidative reaction of degradation: the lower recombination degree of electron-hole pairs due to the separation of charge-carriers; decreased band gap energy, higher roughness and larger content of hydroxil groups on the surface of SnO2/TiO2 bilayers in comparison to the TiO2 films as well as the synergism between anatase and rutile phases.

Misregulation of ER-Golgi Vesicle Transport Induces ER Stress and Affects Seed Vigor and Stress Response.

Seeds of higher plants accumulate numerous storage proteins to use as nitrogen resources for early plant development. Seed storage proteins (SSPs) are synthesized as large precursors on the rough endoplasmic reticulum (rER), and are delivered to protein storage vacuoles (PSVs) via vesicle transport, where they are processed to mature forms. We previously identified an Arabidopsis ER-localized tethering complex, MAG2 complex, which might be involved in Golgi to ER retrograde transport. The MAG2 complex is composed of 4 subunits, MAG2, MIP1, MIP2, and MIP3. Mutants with defective alleles for these subunits accumulated SSP precursors inside the ER lumen. Here, we report that the mag2-1 mip3-1 and mip2-1 mip3-1 double mutant have more serious vesicle transport defects than the mag2-1, mip2-1, and mip3-1 single mutants, since they accumulate more SSP precursors than the corresponding single mutants, and ER stress is more severe than the single mutants. The mag2-1 mip3-1 and mip2-1 mip3-1 double mutants show growth and developmental defects rather than the single mutants. Both single and double mutant seeds are found to have lower protein content and decreased germinating vigor than wild type seeds. All the mutants are sensitive to abscisic acid (ABA) and salt stress, and exhibit alteration in ABA signaling pathway. Our study clarified that ER-Golgi vesicle transport affects seed vigor through controlling seed protein quality and content, as well as plant response to environmental stress via influencing ABA signaling pathway.

Plant Viral Proteases: Beyond the Role of Peptide Cutters.

Almost half of known plant viral species rely on proteolytic cleavages as key co- and post-translational modifications throughout their infection cycle. Most of these viruses encode their own endopeptidases, proteases with high substrate specificity that internally cleave large polyprotein precursors for the release of functional sub-units. Processing of the polyprotein, however, is not an all-or-nothing process in which endopeptidases act as simple peptide cutters. On the contrary, spatial-temporal modulation of these polyprotein cleavage events is crucial for a successful viral infection. In this way, the processing of the polyprotein coordinates viral replication, assembly and movement, and has significant impact on pathogen fitness and virulence. In this mini-review, we give an overview of plant viral proteases emphasizing their importance during viral infections and the varied functionalities that result from their proteolytic activities.

Folding of granulin domains

AbstractGranulins are a family of protein growth factors that are involved in a range of biological functions, including wound repair, inflammation, and tumor growth. They are often expressed as part of large precursor proteins containing multiple granulin domains. Individual granulin domains are characterized by a conserved arrangement of 12 cysteine residues that form six disulfide bonds. Despite the conservation of the cysteine residues, there is significant sequence variation between granulins from different species. The initial structure determined for this family indicated the presence of a well‐defined structure with a laddered arrangement of the six disulfide bonds and a β‐hairpin stack. However, subsequent studies have shown the structure‐function relationships of granulins are quite complex. Recent studies have indicated some granulins might have potential as wound healing agents, and studies aimed at understanding the structure‐function relationships of this family are likely to enhance this potential in drug design. This review provides an overview of the structure‐based studies of granulins, including the folding of truncated peptides derived from granulins from different species.