Lacustrine groundwater discharge (LGD) as a hidden hydrologic process has been widely found to affect water and nutrient balance in various lakes, but a comprehensive research on both spatial and temporal variations of LGD and associated nutrient fluxes was poorly conducted. Herein, this study elucidated their spatio-temporal variations and underlying factors of a typical lake in front of hillocks with spatially variable topography and hydrogeology, and intense seasonal groundwater-lake exchange, within central Yangtze River basin. The 222Rn mass balance model was used in conjunction with hydrochemistry, water isotope, and nutrient data. The results showed that the overall LGD rate and related N/P fluxes were clearly higher in the wet season than in the dry season, for which the stronger evaporation relative to precipitation, more groundwater recharge from agricultural irrigation or aquacultural pond infiltration, and more N/P input from anthropogenic or aquacultural activities could be responsible. In the wet season, the area with more recharge from irrigating water or fish pond water infiltration and associated extensive agricultural or aquacultural activities, had the significantly highest LGD rate and related N/P fluxes. In the dry season, the area with the deepest water depth and largest topographic slope, exhibited the significantly highest LGD rate and slightly higher LGD-related N/P fluxes due to relatively low groundwater N/P concentrations. This study enriched the understanding on LGD and related nutrient fluxes in the perspective of both spatial and temporal variations, taking a new type of lakes (i.e., lakes in the transitional zone of hills and plains in temperate climate) as a typical case.