Shift In Isoelectric Point Research Articles

A Model for the Shift of Isoelectric Points of Oxides in Concentrated and Mixed-Solvent Electrolyte Solutions

It is shown theoretically that the experimentally observed shifts of isoelectric points of various oxide surfaces toward more basic pH's in concentrated and mixed-solvent electrolyte solutions can be explained by a model previously used to predict the phenomenon of “coagulation zones” in the stability of colloids with adsorption layers of nonionic polymers. The model assumes the standard solvation energies of ions near a solid–liquid interface to be different from those in the bulk due to changes in the solvent structure. To reproduce the trends of experimental data in aqueous solutions, the solubilities of both cations and anions must be decreased, but for cations that must occur to a smaller extent. In mixed solvents a qualitative agreement with the experimental data is achieved by assuming that there is a water-enriched layer near the oxide surface.

The B56alpha regulatory subunit of protein phosphatase 2A is a target for regulation by double-stranded RNA-dependent protein kinase PKR.

PKR is a cellular serine/threonine kinase that phosphorylates eukaryotic translation initiation factor 2alpha (eIF2alpha) to regulate protein synthesis. PKR also plays a role in the regulation of transcription, programmed cell death and the cell cycle, processes which likely involve other substrates. In a yeast two-hybrid screen, we isolated human protein phosphatase 2A (PP2A) regulatory subunit B56alpha as a PKR-interacting protein. The interaction between B56alpha and PKR was confirmed by in vitro binding assays as well as by in vivo coimmunoprecipitation, and this interaction is dependent on the catalytic activity of PKR. Moreover, recombinant B56alpha was efficiently phosphorylated by PKR in vitro and an isoelectric point shift in B56alpha was detected in extracts from cells induced with the PKR activator pIC. An in vitro dephosphorylation assay showed that when B56alpha was phosphorylated by PKR, the activity of PP2A trimeric holoenzyme was increased. A functional interaction between B56alpha and PKR was observed in cotransfection assays, where a B56alpha-mediated increase in luciferase expression was inhibited by cotransfection with wild-type PKR. This is likely due to a decreased level of eIF4E phosphorylation caused by an increase in PP2A activity following PKR phosphorylation of B56alpha. Taken together, our data indicate that PKR can modulate PP2A activity by phosphorylating B56alpha to regulate cellular activities.

Isolation and characterization of two acyl-CoA-binding proteins from proembryogenic masses of Digitalis lanata Ehrh.

Two acyl-CoA-binding-protein (ACBP) isoforms were isolated from proembryogenic masses of Digitalis lanata Ehrh. by column chromatography and preparative HPLC. The ACBPs had molecular masses of 9926 and 9997 Da, respectively. Partial sequence data indicated high similarity to each other and to ACBPs of other plant species such as Ricinus communis, Brassica napus and Arabidopsis thaliana. The isolated ACBPs bound palmitoyl-CoA with high affinity as determined by isoelectric-point shift.

Adsorption and electrokinetic studies on alumina suspensions using poly(vinyl alcohol)

The adsorption of poly(vinyl alcohol) (PVA) of molecular weight 25,000 onto alumina was studied as a function of pH. The adsorption isotherms were also determined. The adsorption density increases with increasing pH, while the isotherms are rounded and of the low affinity type. Electrokinetic studies indicate that the electrophoretic mobilities are reduced in magnitude in proportion to the PVA concentration, without any shift in isoelectric-point (iep). This resembles the influence of an indifferent electrolyte. The calculated values of the free energy of adsorption between alumina and PVA are suggestive of hydrogen bonding. FTIR spectroscopic data provide additional evidence in support of hydrogen bonding.

N-Linked Glycosylation and Sialylation of the Acid-labile Subunit: ROLE IN COMPLEX FORMATION WITH INSULIN-LIKE GROWTH FACTOR (IGF)-BINDING PROTEIN-3 AND THE IGFs

Over 75% of the circulating insulin-like growth factors (IGF-I and -II) are bound in 140-kDa ternary complexes with IGF-binding protein-3 (IGFBP-3) and the 84-86-kDa acid-labile subunit (ALS), a glycoprotein containing 20 kDa of carbohydrate. The ternary complexes regulate IGF availability to the tissues. Since interactions of glycoproteins can be influenced by their glycan moieties, this study aimed to determine the role of ALS glycosylation in ternary complex formation. Complete deglycosylation abolished the ability of ALS to associate with IGFBP-3. To examine this further, seven recombinant ALS mutants each lacking one of the seven glycan attachment sites were expressed in CHO cells. All the mutants bound IGFBP-3, demonstrating that this interaction is not dependent on any single glycan chain. Enzymatic desialylation of ALS caused a shift in isoelectric point from 4.5 toward 7, demonstrating a substantial contribution of anionic charge by sialic acid. Ionic interactions are known to be involved in the association between ALS and IGFBP-3. Desialylation reduced the affinity of ALS for IGFBP-3. IGF complexes by 50-80%. Since serum protein glycosylation is often modified in disease states, the dependence of IGF ternary complex formation on the glycosylation state of ALS suggests a novel mechanism for regulation of IGF bioavailability.

Iodine disinfection of a model bacteriophage, MS2, demonstrating apparent rebound

MS2 coliphage viruses suspended in buffered distilled water were rapidly inactivated by <5 mg/L iodine doses, losing 6 logs (99.9999%) of infectivity within less than 3 min contact time. The effect of pH on MS2 inactivation within the range of 6 to 8 was not statistically significant. However, in the presence of dissolved organic substances, such as detergents and proteins, the inactivation of MS2 viruses decreased significantly to less than 4 logs (99.99%). Of special interest was that in the presence of beef extract proteins, an apparent reversal of MS2 inactivation, dubbed rebound, was observed. It was observed that after an initial 5 to 6 log reduction in infectivity, a consistent and statistically significant increase in the number of plaque forming units (PFU), as much as 2 logs, was measured. MS2 rebound occurred only when the oxidized iodine residual had been quickly consumed by beef extract proteins in solution. Neither virus particle aggregation nor water salinity were found to account for the increase in PFU values. Based on other investigators' suggestions that iodine disinfection caused changes to viral protein coats, it was hypothesized that conformational changes in MS2's protein coat caused by iodine would result in a change in the isoelectric focusing point of whole MS2 virions. A shift in isoelectric focusing point from an acidic pH value of 3.9 to more basic values, and a dispersion of the virus band after exposure to high levels of iodine was observed, supporting the hypothesis that iodine caused changes in the charge distribution characteristics of the protein coat.

Modulation of Osteopontin Post-translational State by 1,25-(OH)2-Vitamin D3: DEPENDENCE ON Ca2+ INFLUX

In osteoblastic ROS 17/2.8 cells, 1,25-(OH)2-vitamin D3 stimulates transcription of the extracellular matrix phosphoprotein osteopontin (OPN). We now show post-translational regulation of OPN production by 1,25-(OH)2D3. Prior to transcriptional up-regulation of OPN, 1, 25-(OH)2D3 induces a shift in OPN isoelectric point (pI) from 4.6 to 5.1. Loading equal amounts of OPN recovered from ROS 17/2.8 cells exposed to 1,25-(OH)2D3 or carrier for 3 h reveals that the pI shift represents reduced phosphorylation. Trypsin cleavage patterns of OPN produced after 1,25-(OH)2D3 treatment indicates phosphorylation changes in the resulting peptides. Using structural analogs to 1, 25-(OH)2D3, we found that analog AT (25-(OH)-16-ene-23-yne-D3), which triggers Ca2+ influx but does not bind to the vitamin D receptor, mimicked the OPN pI shift, whereas analog BT (1, 25-(OH)2-22-ene-24-cyclopropyl-D3), which binds to the vitamin D receptor without triggering Ca2+ influx, did not. Likewise, inclusion of the Ca2+ channel blocker nifedipine blocks the charge conversion of OPN. Isolation of OPN from rat femurs and tibiae demonstrates the existence of two OPN charge forms in vivo. We conclude that 1,25-(OH)2D3 regulates OPN not only at the transcriptional level, but also modulates OPN phosphorylation state. The latter involves a short term (<3 h) treatment and is associated with membrane-initiated Ca2+ influx.

Rapid and informative assays for Yd2, the barley yellow dwarf virus resistance gene, based on the nucleotide sequence of a closely linked gene

This paper describes the isolation of the cDNA encoding a protein previously shown to be indicative of the disease-resistance phenotype mediated by the Yd2 gene in barley (Hordeum vulgare L.). Amino acid sequences of four peptides obtained after isolation of the protein on two-dimensional polyacrylamide gels were completely homologous to sequences occurring within subunit E of barley vacuolar proton-translocating ATPase. Nucleotide sequence data of cloned cDNAs from both Yd2 and non-Yd2 barley varieties showed an amino acid change arising from a single-base-pair polymorphism. This was predicted to result in the shift in isoelectric point used previously to differentiate the protein in Yd2 and non-Yd2 barleys. Earlier work had indicated very close linkage between the gene from which this cDNA is derived, which we have named Ylp, and Yd2, the barley yellow dwarf virus resistance gene. We report here the development of PCR-based assays which discriminate between the two alleles of Ylp and thereby act as valuable predictors of Yd2 for barley breeders and others looking to study this important gene in cereal crops. The validity of each assay was tested with an extensive survey of over 100 barley varieties currently under cultivation in Australia or of importance to Australian barley breeding programmes. Complete agreement was observed between the allele of Ylp detected by the assay and the known Yd2 status of the barleys. A dominant PCR marker for the Yd2-associated allele of Ylp was subsequently developed using an allele-specific primer pair. This fast and economical assay will have broad application in the marker-assisted selection of Yd2-containing lines.

Amino-acid substitution in alpha-spectrin commonly coinherited with nondominant hereditary spherocytosis.

Nondominant hereditary spherocytosis (ndHS) is a disorder characterized in some patients by severe hemolytic anemia and marked deficiency of erythrocyte spectrin. This report describes the identification of a variant spectrin chain, alpha-spectrin Bughill or alpha(BH), that is associated with this disorder in a number of patients. Tryptic maps of spectrin from affected individuals revealed an acidic shift in isoelectric point of the alphaII domain peptides at 46 kD and 35 kD. A point mutation at codon 970 of the alpha-spectrin gene (GCT-->GAT), that changes the encoded amino acid from an alanine to an aspartic acid, was identified in genomic DNA of affected patients. The alpha(BH) variant was present in 8 patients with ndHS from five different kindreds but was absent in 4 patients from two other kindreds. The 8 ndHS patients with the alpha(BH) variant appeared to be homozygous for the alpha(BH) variant by analysis of peptide maps of limited tryptic digests of erythrocyte spectrin. However, following genomic DNA analysis, only 2 of these patients were true homozygotes, whereas 6 were found to be doubly heterozygous for the alpha(BH) allele and a second, presumably abnormal, alpha-spectrin gene. These results suggest that, in these 6 patients, the second alpha-spectrin allele is in fact associated with one or more genetic defect(s), causing decreased accumulation of alpha-spectrin. The pattern of transmission of the alpha(BH) allele in certain families suggests that the alpha(BH) amino-acid substitution is not itself responsible for ndHS but is more likely a polymorphic variant that, in some but not all cases, is in linkage disequilibrium with another uncharacterized alpha-spectrin gene defect that itself is a cause of ndHS.

Hydrothermal ageing effects on the coprecipitated mullite-alumina composite precursor

Hydrothermal ageing experiments were performed on a mullite suspension obtained by a coprecipitation method to study its effects on the electrophoretic behaviour and morphology of the particles in suspension. The changes in hydration degree, and chemical environments of silicon ions and aluminium ions were also studied. With the increase in the ageing time, the isoelectric point (IEP) of the particles surface gradually decreased from pH 8.2, for the freshly precipitated powder, to pH 5.8 after the suspension has been refluxed at 100 °C for 24 hours. This shift in IEP was attributed to a depolymerization and dissolution process of silicon-containing species and its precipitation on the surface of the particles present in the aged suspensions. The hydration degree of the precursor was reduced as shown by the weight changes in the TG analysis. These phenomena were enhanced by autoclave ageing at 230 °C which transformed all bayerite into boehmite. These transformations were accompanied by some replacement of SiOSi bonds by Si OAl bonds and smoothing of the particle surface.

Superoxide Dismutase: A Differentiation Protein Expressed in Uromyces Germlings during Early Appressorium Development

Lamboy, J. S., Staples, R. C., and Hoch H. C. 1995. Superoxide dismutase: A differentiation protein expressed in Uromyces germlings during early appressorium development. Experimental Mycology 19, 284-296. Germlings of the bean rust fungus Uromyces appendiculatus detect penetration sites on the surface of the host leaf by thigmosensing topographical features. Within 2-4 min after the apex of a urediospore germ tube encounters the cuticular lip of a stomate, the germling ceases polarized growth and begins to swell over the aperture. The mechanism by which the cells detect topographical signals is not understood; however, previous experiments indicated that the initiation process does not involve de novo gene expression. In order to detect posttranslational modifications, the protein profiles of induced and noninduced germlings were compared at the earliest stages of appressorium formation, and a 21-kDa differentiation protein was identified by a shift in isoelectric point. The N-terminal amino acid sequence exhibited homology with superoxide dismutase (SOD), and antibodies to a synthetic peptide fragment of the respective sequence recognized cooper/zinc isozymes of SOD in electroblots of native gels. Electroelution of the active enzyme bands and separation by SDS-PAGE indicated that the 21-kDa protein is a component of a tetrameric 85-kDa SOD.

Characterization of arsenate adsorption on hydrous iron oxide using chemical and physical methods

The adsorption of arsenate by hydrous iron oxide was investigated by both chemical and physical energy dispersive analysis of X-rays (EDAX) and Fourier transform infrared (FTIR) methods. The chemical methods for characterizing arsenate adsorption sites on hydrous iron oxide surfaces in this work were investigations of the effect of ionic strength and zeta potential measurements of iron oxide systems containing various arsenate concentrations over the pH range 4–10. An inner-sphere complexation at the aqueous arsenate/iron oxide interface was identified from the results of the ionic strength effect and the shift in isoelectric point of the system. Evidence for direct coordination of arsenate to the surface of iron oxide was obtained by EDAX and FTIR techniques. Results from these physical methods showed that arsenate was chemisorbed on the iron oxide surface. Specific adsorption could therefore be deduced, on the basis of both chemical and physical methods, to occur at the aqueous arsenate and solid iron oxide interfaces.

Chemical and spectroscopic evidence for specific adsorption of chromate on hydrous iron oxide

The adsorption of chromate from aqueous solution was investigated to understand the binding characteristics of chromate on hydrous iron oxide. Both chemical and spectroscopic analyses (EDAX, Energy Dispersive Analysis of X-Ray and FTIR, Fourier Transform Infrared) were used for characterizing the chromate adsorption sites on hydrous iron oxide. The zeta potential measurements were conducted for observation of the shift in isoelectric point of the system containing iron oxide suspension and various concentrations of chromate. The isoelectric point of the system containing more chromate was a few pH units lower than that of the system containing less chromate or no chromate. This phenomenon was attributed to an increase in the negative charge of the iron oxide surface as a result of adsorption of chromate. An inner-sphere coordination of chromate to iron oxide surface was identified from EDAX and FTIR results. Specific adsorption was therefore required to occur at the aqueous chromate anion and iron oxide interfaces.

The hepatic acute-phase proteins alpha 1-antitrypsin and alpha 2-macroglobulin inhibit binding of transferrin to its receptor.

Transferrin binding to human placental sites was inhibited by the acute-phase proteins alpha 1-antitrypsin (alpha 1-AT) and alpha 2-macroglobulin (alpha 2-MG), whereas haptoglobin, C-reactive protein and ferritin displayed no such effect. In equilibrium saturation binding assays, the effective acute-phase proteins decreased the apparent affinity of the binding sites for transferrin, but the transferrin binding-site density Bmax. was not significantly changed. For instance, the addition of 30 microM alpha 1-AT increased the KD of transferrin from 8.46 +/- 1.51 nM to 21.6 +/- 3.04 nM; the Bmax. values were 1.17 +/- 0.18 pmol/mg of protein and 1.04 +/- 0.25 pmol/mg of protein respectively. In kinetic studies, alpha 1-AT decreased the association rate constant k+1 of the 125I-transferrin-binding-site complex from 2.18(+/- 0.21) x 10(7) M-1.min-1 to 3.99(+/- 0.18) x 10(6) M-1.min-1. In contrast, the dissociation rate constant k-1 was not changed (0.0948 +/- 0.002 min-1, 0.089 +/- 0.0017 min-1). On isoelectric focusing, no alteration in transferrin protein pattern or shift in isoelectric point was detected in the presence of alpha 1-AT. Inhibition of transferrin binding by the acute-phase proteins alpha 1-AT and alpha 2-MG is competitive. Interestingly, inhibition is already present at physiological concentrations. However, full inhibition is only achieved at concentrations above the normal range, which are attained in acute-phase reactions.

A Drosophila Homolog of Bovine smg p25a GDP Dissociation Inhibitor Undergoes a Shift in Isoelectric Point in the Developmental Mutant quartet

The Drosophila developmental mutation quartet causes late larval lethality and small imaginal discs and, when expressed in the adult female, has a lethal effect on early embryogenesis. These developmental defects are associated with mitotic defects, which include a low mitotic index in larval brains and incomplete separation of chromosomes in mitosis in the early embryo. quartet mutations also have a biochemical effect, i.e., a basic shift in isoelectric point in three proteins. We have purified one of these proteins, raised an antibody to it, and isolated and sequenced its cDNA. At the amino acid level, the sequence shows 68% identity and 81% similarity to bovine smg p25a GDP dissociation inhibitor (GDI), a regulator of ras-like small GTPases of the rab/SEC4/YPT1 subfamily. The correlation between a basic shift in isoelectric point in Drosophila GDI in quartet mutant tissue and the quartet developmental phenotype raises the possibility that a posttranslational modification of GDI is necessary for its function and that GDI function is essential for development.

A Drosophila homolog of bovine smg p25a GDP dissociation inhibitor undergoes a shift in isoelectric point in the developmental mutant quartet.

The Drosophila developmental mutation quartet causes late larval lethality and small imaginal discs and, when expressed in the adult female, has a lethal effect on early embryogenesis. These developmental defects are associated with mitotic defects, which include a low mitotic index in larval brains and incomplete separation of chromosomes in mitosis in the early embryo. quartet mutations also have a biochemical effect, i.e., a basic shift in isoelectric point in three proteins. We have purified one of these proteins, raised an antibody to it, and isolated and sequenced its cDNA. At the amino acid level, the sequence shows 68% identity and 81% similarity to bovine smg p25a GDP dissociation inhibitor (GDI), a regulator of ras-like small GTPases of the rab/SEC4/YPT1 subfamily. The correlation between a basic shift in isoelectric point in Drosophila GDI in quartet mutant tissue and the quartet developmental phenotype raises the possibility that a posttranslational modification of GDI is necessary for its function and that GDI function is essential for development.

.zeta.-potentials of silica in water-alcohol mixtures

Two effects of 1-alcohols (up to 30% w/w) on electrokinetic properties of silica in the presence of different concentrations of KCl (1 x 10{sup -3}-1 x 1-{sup -1} mol dm{sup -3}) are described. The isoelectric point shifts toward more basic pH, while the negative {zeta}-potentials decrease with higher concentrations of the alcohol and the electrolyte. The change in the pH{sub iep} is explained in terms of the complexation of protonated surface hydroxyl groups by alcohol molecules. The lower negative {zeta}-potentials are due to an increase in cation activity in mixed solvents and, thus, an enhanced counterion adsorption in the Stern layer. 15 refs., 8 figs., 1 tab.

Protein alterations associated with N‐methyl‐N‐nitrosourea exposure of preimplantation mouse embryos transferred to surrogate mothers

Mouse preimplantation embryo functions have been shown to be disrupted by in vitro exposure to N-methyl-N-nitrosourea (MNU) with subsequent transfer to the uteri of pseudopregnant surrogate mothers. Increased gross malformations and decreased fetal body lengths in the midgestational period have been previously documented. Protein extracts were isolated from day 12 mouse fetuses developed from MNU- or solvent-exposed blastocysts and analyzed by two-dimensional electrophoresis. The electrophoretic patterns reveal six protein alterations in day 12 fetal tissue induced by MNU treatment at the blastocyst stage. Five of these alterations involve shifts in isoelectric point (pI) and the other alteration involves a quantitative increase in a protein. The possibility that two of the proteins which exhibit a shift in pI following MNU exposure represent the cell adhesion molecules, N-CAM and L-CAM (based on similar Mr values), was investigated by Western blot analysis. No pI alteration in L-CAM or N-CAM expression is seen after MNU exposure. These results demonstrate that in vitro MNU exposure of preimplantation embryos results in protein alterations in midgestational fetuses. Thus, the effects of MNU exposure on preimplantation embryos may be manifest long after exposure, and subtle, non-lethal mutations may play a role in poor fetal outcome after early chemical exposure.

Lack of detectable endocytosis of B lymphocyte MHC class II antigens using an antibody-independent technique.

MHC class II complexes may intercept ingested foreign Ag as the nascent class II molecules exit the cell or as mature complexes recycle between the outer membrane and an internal compartment. To examine endocytosis of HLA-DR, we radiolabeled B lymphoblastoid cells, warmed the cells to allow internalization of membrane proteins, and then subjected viable cells to neuraminidase (NANAse)3 digestion. DR complexes were precipitated and analyzed by two-dimensional PAGE for shifts in isoelectric point signifying sensitivity to or protection from NANAse treatment. DR molecules were completely sensitive to the enzyme with or without specific antibody in the medium during the 37 degrees C incubation, suggesting that no detectable endocytosis had occurred. Control transferrin receptors, which readily internalize, showed marked protection. Assay sensitivity was measured by proportionate mixing of mock and NANAse-treated lysates; precipitated sialylated molecules were detectable at the 10% level. Monensin treatment to block recycling also failed to reveal any internally accumulated. NANAse-protected DR molecules. Measurements of turnover for surface-labeled DR complexes revealed a t 1/2 of approximately 36 h. We conclude that no large endocytically-derived pool of HLA-DR molecules exists within cells and suggest that the majority of mature DR molecules do not actively undergo internalization but reside at the cell surface after synthesis/transport for significantly long periods of time.

Characteristics of fatty acid-binding proteins and their relation to mammary-derived growth inhibitor

Based on sequence relationships the cytoplasmic fatty acid-binding proteins (FABPs) of mammalian origin are divided into at least three distinct types, namely the hepatic-, intestinal- and cardiac-type. Highly conserved sequences of FABPs within the same type correlate with immunological crossreactivities. Isoforms of hepatic-type FABP are found in several mammalian species and for bovine liver FABP specific shifts in isoelectric points upon lipidation with fatty acids are observed. Isoforms of intestinal-type FABP are not known and the occurrence of cardiac-type isoforms so far is confined to bovine heart tissue. A bovine mammary-derived growth inhibitor (MDGI) is 95% homologous to the cardiac-type FABP from bovine heart. Dissociation constants of FABP/fatty acid complexes are in the range of 1 microM and 1:1 stoichiometries are usually found, but the neutral isoform of hepatic FABP from bovine liver binds 2 fatty acids. On subcellular levels hepatic- and cardiac-type FABPs are differently distributed. Though mainly cytosolic in either case, immunoelectron microscopy as well as a gelchromatographic immunofluorescence assay demonstrate the association of hepatic FABP in liver cells with microsomal and outer mitochondrial membranes and with nuclei, whereas in heart cells cardiac FABP is confined to mitochondrial matrix and nuclei. In mammary epithelial cells MDGI is associated with neither mitochondria nor endoplasmic reticulum, and is expressed in a strictly developmental-dependent spatial and temporal pattern. The specific role proposed for MDGI is to arrest growth of mammary epithelial cells when they become committed to differentiation in the mammary gland.