Abstract Fluoroscopy-guided percutaneous biopsy interventions are mostly performed with traditional free-hand technique. The practical experience of the surgeon influences the duration of the intervention and the radiation exposure for patients and him-/herself. Especially when the placement of heavy and long instruments in double oblique angles is required, manual techniques reach their technical limitations very fast. The system presented herein automatizes the needle positioning using only two 2D scans while the robotic platform guides the intervention. These two images were used to plan the needle pathway and to estimate the pose of the robot using a custom-made end-effector with embedded registration fiducials. The estimated pose was subsequently used to transfer the planed needle path to the robot’s coordinate system and finally to compute the movement parameters in order to align the robot with this plan. To evaluate the system, two phantoms with 11 different targets on it were developed. The targets were punctured, and the application accuracy was measured quantitatively. The solution achieved sub-millimetric accuracy for needle placement (min. 0.23, max. 1.04 in mm). Our approach combines the advantages of fluoroscopic imaging and ensures automatic needle alignment with highly reduced X-ray radiation. The proposed system shows promising potential to be a guidance platform that is easy to combine with available fluoroscopic imaging systems and provides valuable help to the physician in more difficult interventions.