Indicators Of Fecal Pollution Research Articles

Distribution and Differential Survival of Traditional and Alternative Indicators of Fecal Pollution at Freshwater Beaches.

E. coli and enterococci are general indicators of fecal pollution and may persist in beach sand, making their use problematic for many applications. This study demonstrates that gull fecal pollution is widespread at Great Lakes beaches, whereas human and ruminant contamination is evident only after major rain events. An exploration of sand as a reservoir for indicators found that E. coli was ubiquitous, while gull host markers were detected in only 25% of samples. In situ sand beach microcosms provided decay rate constants for E. coli and enterococci relative to alternative indicators, which establish comparative benchmarks that would be helpful to distinguish recent from past pollution. Overall, alternative indicators are useful for identifying sources and assessing potentially high health risk contamination events; however, beach managers should be cautious in attempting to directly link their detection to the levels of E. coli or enterococci.

Draft Genome Sequence of an Enterococcus faecalis ATCC 19433 Siphovirus Isolated from Raw Domestic Sewage.

ABSTRACTWe previously isolated and characterized an Enterococcus faecalis ATCC 19433 siphovirus from raw domestic sewage as a viral indicator of human fecal pollution. Here, we report the draft genome sequence of this bacteriophage.

Temporal Evolution of the Microbiological Conditions of a Sicilian Area Designed for Aquaculture (Castellammare Gulf, Southern Tyrrhenian Sea)

Microbiological controls of coastal seawaters are a common practice to verify their safety for human recreational and productive uses. The aim of the present study is to describe the microbiological conditions of the Castellammare Gulf (Trapani, Sicily), an area traditionally used for aquaculture purposes. Particularly, the results obtained from three surveys (1993-1995, 2000-2001 and 2007) are compared in order to depict how the hygienic-sanitary conditions of this marine ecosystem have evolved over time. Attention has been given to the abundance and distribution of the bacterial indicators of faecal pollution (faecal coliforms, enterococci and Salmonella spp.) as well as halophilic vibrios, using the culture methods conventionally indicated by current legislation in force for the sanitary control of waters designed for aquaculture productions. The obtained results shows that the sanitary conditions of seawater samples met the criteria recommended by current legislations for shellfish farming approved areas. The low concentrations of faecal pollution indicators and of halophilic vibrios confirm the general suitability of the Gulf of Castellammare for seafood production. Nevertheless, the detection of low percentages of potentially pathogenic species of halophilic vibrios stresses the importance of extending microbiological controls also to these emerging pathogens.

The Study on the Survival of Escherichia Coli in Water at Room Temperature

Escherichia coli (E. coli) is one of the most frequent causes of many bacterial infections especially gastroenteritis in developing countries. It is also used as an indicator for faecal pollution in the surveillance of bacteriological quality of drinking water. This study was conducted to determine the survival of E. coli in water at room temperature (27oC). E. coli which is cultured in Lactose Peptone Broth was inoculated into 8 bottles each containing 10 millilitres of distilled water. They were kept at 27oC. Starting from the day 1, ten-fold dilutions were made from each bottle number and E. coli count was done from each dilutions by using pour plate method. The colony forming unit/ millilitre (CFU/ml) was calculated. The same procedure was carried out from bottles number 2 to 8 from day 2 to day 8 consecutively. CFU/ml of E. coli in dilution 10-5was markedly decreased from 3.9 x 106 in day 1to 0 in day 8. The findings suggest that if the water is contaminated with low number of E. coli, it can be eliminated by keeping water at room temperature for only few days.

Rapid and sensitive method to assess human viral pollution in shellfish using infectious F-specific RNA bacteriophages: Application to marketed products

F-specific RNA bacteriophages (FRNAPH) have been used as indicators of environmental fecal pollution for many years. While FRNAPH subgroup I (FRNAPH-I) are not host specific, some FRNAPH-II and -III strains appear specific to human pollution. Because a close relationship has been observed between FRNAPH-II genome and human norovirus (NoV) in shellfish, and because FRNAPH infectivity can easily be investigated unlike that of NoV, the detection of human infectious FRNAPH could therefore provide a valuable tool for assessing viral risk. In this study, an integrated cell culture real-time RT-PCR method has been developed to investigate infectious FRNAPH subgroup prevalence in oysters. This rapid screening method appears more sensitive than E. coli or NoV genome detection, and allows an FRNAPH subgroup present in low concentrations (0.05 PFU/g of oyster) to be detected in the presence of another 1000 times more concentrated, without any dissection step. Its application to marketed oysters (n = 135) over a 1-year period has allowed to identify the winter peak classically described for NoV or FRNAPH accumulation. Infectious FRNAPH were detected in 34% of batches, and 7% were suspected of having a human origin. This approach may be helpful to evaluate oyster’s depuration processes, based on an infectious viral parameter.

A study of the bacteriological quality of roof-harvested rainwater and an evaluation of SODIS as a suitable treatment technology in rural Sub-Saharan Africa

Harvested rainwater (HRW) is of great socio-economic importance particularly in areas where water sources are scarce or polluted. This case study was carried out in a rural area of Southern Uganda where the community has limited access to safe drinking water. The aims of the project were to investigate the quality of harvested rainwater over a year long period covering wet and dry seasons and to investigate the use of solar waterdisinfection (SODIS) as a water treatment technology. Fifty households using roof HRW were selected. The systems used included catchment ponds, metallic, concrete and plastic tanks. All households used the HRW for drinking. The raw HRW was analysed for temperature, pH and total dissolved solids (TDS) and for the presence of the bacterial indicators of faecal pollution – Escherichia coli, faecal enterococci and Clostridium perfringens. Results indicated that while the HRW met the required physiochemical drinking water standards, the majority of samples from all types of system showed levels of microbiological contamination indicating that the water was unsafe for drinking without treatment. The use of SODIS to treat the water was investigated using 2Liter PET bottles and was shown to be an effective treatment technology.

MICROBIOLOGICAL ASSESSMENT OF THE LAKES BISTARAC AND VIDARA WATER QUALITY

UDK: 574.5:579.68(285)(497.6)
 In the spring and summer season of 2014, the change in the number of coliform and heterotrophic bacteria in specific localities of lake Bistarac and lake Vidara were observed and analyzed. Lake Bistarac was formed after the cessation of surface mining in the open pit, while lake Vidara is the artificial lake in the area of Gradacac made in order to protect the industrial zone of flooding. Both of these lakes, placed in Tuzla Canton, are very attractive for tourist and frequently are used for swimming, fishing and recreation. Results of this study showed an increased number of coliform bacteria in both periods, and the presence of Escherichia coli as a direct indicator of fecal pollution, while, as an additional indicator of fecal pollution, Citrobacter and Enterobacter were identified. From the total number of analyzed water samples of the lake Bistarac, 60% of samples belonged into to the second class, and 40% into the first class of water quality. Lake Vidara showed poor quality as the 80% of the analysed samples belonged to the second class and only 20% into the first class of water quality. For the microbiological assessment of the water quality standard microbiological procedures and methods were used. One of the main reasons for poor hygienic state of these two lakes is unregulated sewage network of the villages, restaurants and camping areas placed near the lakes. The increased number of fecal bacteria was found in the water of both lakes, which can be highly dangerous for the human population. Since both lakes are used for recreational purposes it is necessary to establish an appropriate monitoring system on the basis of which is possible to take measures and to protect and improve water quality.

Seasonality of Coliform Bacteria Detection Rates in New Jersey Domestic Wells.

It is important that indicators of fecal pollution are reliable. Coliform bacteria are a commonly used indicator of fecal pollution. As other investigators have reported elsewhere, we observed a seasonal pattern of coliform bacteria detections in domestic wells in New Jersey. Examination of a statewide database of 10 years of water quality data from 93,447 samples, from 78,207 wells, generated during real estate transactions, revealed that coliform bacteria were detected in a higher proportion of wells during warm weather months. Further examination of the seasonal pattern of other data, including well water pH, precipitation, ground and surface water temperatures, surface water coliform bacteria concentrations, and vegetation, resulted in the hypothesis that these bacteria may be derived from nonfecal (or environmentally adapted) as well as fecal sources. We provide evidence that the coliform seasonality may be the result of seasonal changes in groundwater extraction volumes (and to a lesser extent precipitation), and temperature-driven changes in the concentration of surface or near-surface coliform sources. Nonfecal coliform sources may not indicate the presence of fecal wastes and hence the potential presence of pathogens, or do so in an inconsistent fashion. Additional research is needed to identify the sources of the coliforms detected in groundwater.

Differential decomposition of bacterial and viral fecal indicators in common human pollution types

Understanding the decomposition of microorganisms associated with different human fecal pollution types is necessary for proper implementation of many water quality management practices, as well as predicting associated public health risks. Here, the decomposition of select cultivated and molecular indicators of fecal pollution originating from fresh human feces, septage, and primary effluent sewage in a subtropical marine environment was assessed over a six day period with an emphasis on the influence of ambient sunlight and indigenous microbiota. Ambient water mixed with each fecal pollution type was placed in dialysis bags and incubated in situ in a submersible aquatic mesocosm. Genetic and cultivated fecal indicators including fecal indicator bacteria (enterococci, E. coli, and Bacteroidales), coliphage (somatic and F+), Bacteroides fragilis phage (GB-124), and human-associated genetic indicators (HF183/BacR287 and HumM2) were measured in each sample. Simple linear regression assessing treatment trends in each pollution type over time showed significant decay (p ≤ 0.05) in most treatments for feces and sewage (27/28 and 32/40, respectively), compared to septage (6/26). A two-way analysis of variance of log10 reduction values for sewage and feces experiments indicated that treatments differentially impact survival of cultivated bacteria, cultivated phage, and genetic indicators. Findings suggest that sunlight is critical for phage decay, and indigenous microbiota play a lesser role. For bacterial cultivated and genetic indicators, the influence of indigenous microbiota varied by pollution type. This study offers new insights on the decomposition of common human fecal pollution types in a subtropical marine environment with important implications for water quality management applications.

Water Quality Changes Shortly After Low‐Head Dam Removal Examined With Cultural and Microbial Source Tracking Methods

AbstractShort‐term effects of low head dam removal on water quality of urbanized stream were evaluated, focusing on fecal pollution indicators. Composite river samples were analyzed for Escherichia coli concentrations, nitrates, phosphates, turbidity and human‐specific marker (HF183) and antibiotic resistance marker (tetQ) before and after dam removal during dry weather conditions. The sampled Olentangy River water in summer before the dam removal showed poor water quality with mean E. coli concentration of 439 colony forming unit (CFU)/100 mL, mean turbidity of 10 NTU and mean nutrient concentrations of 0.61 and 0.41 mg/L for nitrate and phosphate, respectively. Surprisingly, even one month after the dam removal, E. coli numbers doubled and nitrate concentration tripled compared to pre‐removal concentrations. Although the detected HF183 concentrations were below the quantifiable levels, they did not correlate with E. coli concentrations, suggesting E. coli from other than human fecal origin. The correlation between turbidity and E. coli during dry weather further suggests E. coli accumulation in impoundment sediments and release once dam was removed. These short‐term effects of dam removal on water quality should be further evaluated, especially if recreation and other beneficial uses of water in the area are expected. Copyright © 2016 John Wiley & Sons, Ltd.

Relevance of F-Specific RNA Bacteriophages in Assessing Human Norovirus Risk in Shellfish and Environmental Waters.

Human noroviruses (HuNoVs) are the main cause of shellfish-borne gastroenteritis outbreaks. In the absence of routine technical approaches allowing infectious particles to be detected, this viral pathogen is currently targeted by genome research, leading to difficult interpretations. In this study, we investigated the potential of F-specific RNA bacteriophages (FRNAPH) as fecal and viral contamination indicators in shellfish and water from a local harvesting area. FRNAPH were also used as microbial source tracking tools. Constraints imposed by detection limits are illustrated here by the detection of infectious FRNAPH in several samples in the absence of FRNAPH genomes. The opposite situation was also observed, likely explained by the persistence of the genomes being greater than infectivity. Similar considerations may be applied to HuNoVs, suggesting that HuNoV genome targeting is of limited relevance in assessing infectious risks. While FRNAPH did not provide any benefits compared to Escherichia coli as fecal pollution indicators in water, novel observations were made in shellfish: contrary to E. coli, a seasonal trend of infectious FRNAPH concentrations was observed. These concentrations were higher than those found in water, confirming bioaccumulation in shellfish. This study also underlines a relationship between the presence of HuNoV genomes and those of human-specific FRNAPH subgroup II (FRNAPH-II) in shellfish collected throughout Europe. Further research should be undertaken to evaluate FRNAPH potential as an indicator of the presence of infectious HuNoVs. To this end, shellfish involved in HuNoV-caused gastroenteritis outbreaks should be analyzed for the presence of infectious FRNAPH-II. This work provides new data about the use of F-specific RNA phages (FRNAPH) as a tool for evaluating fecal or viral contamination, especially in shellfish. In our case study, FRNAPH did not provide any benefits compared to E. coli as fecal pollution indicators in water but were found to be very useful in shellfish. Their concentrations in shellfish were higher than those found in the surrounding water, confirming bioaccumulation. This study also underlines a relationship between the presence of human norovirus genomes (HuNoVs) and those of FRNAPH subgroup II (FRNAPH-II). Considering that the two virus types have similar behaviors and since FRNAPH infectivity can be investigated, the specific detection of infectious FRNAPH-II could be regarded as an indication of the presence of infectious HuNoVs. The contribution of infectious human FRNAPH targeting for assessing the viral risk associated with HuNoVs in shellfish should thus be investigated.

A Novel Handheld Fluorimeter for Rapid Detection of <italic>Escherichia coli</italic> in Drinking Water

The microbiological quality of drinking water is a concern to consumers, water suppliers, regulators, and public health authorities alike. Monitoring the microbiological quality of drinking water largely relies on the examination of indicator bacteria such as coliforms like Escherichia coli . E. coli is widely used as an indicator of fecal pollution when monitoring the microbial quality of drinking water, because it is abundant in all mammal feces and, therefore, is found in sewage and in natural waters contaminated with fecal matter, from human origin, wild animals, or derived from agricultural activity. This paper describes the development of a novel handheld fluorimeter for the rapid detection of E. coli in drinking water based on a specific cellular biomarker. The measurement system is based on a photomultiplier tube that captures the fluorescence signal produced by the cellular biomarker when it is excited by an ultraviolet LED. The cellular biomarker is also developed and it consists of a chimeric protein with a Green fluorescent protein (GFP) in the N-terminal domain and a specific amino acid sequence in the C-terminal domain (Colicin S4) that targets specifically the structure of the microorganism to be detected. The instrument is simple to use, lightweight, and can be powered by either an ac/dc power adapter or a rechargeable battery, making it an excellent choice for the rapid detection of E. coli in drinking water in field studies and laboratory measurements.

Microbial community and its potential as descriptor of environmental status

Abstract Planktonic communities hold a relevant role within the EU Marine Strategy Framework Directive (MSFD). In view of reaching the Good Environmental Status of marine ecosystems, within this Directive the phyto- and zooplanktonic communities have received great attention, while Prokaryotes (Bacteria, Archaea, and Cyanobacteria) have been neglected. Indeed, the relevance of microbes (particularly of the faecal pollution indicators) as water quality indicators, the role that microorganisms play within the biogeochemical fluxes and in the whole ecosystem functioning, are all important features that deserve to be focused within the MSFD. The present study aims at reviewing the main issues where prokaryotic variables find useful application as descriptors of environmental status, trying to develop a panel of prokaryotic indicators suitable for the environmental quality assessment. From a survey of scientific literature and on field datasets, prokaryotic abundance and activities (enzymatic hydrolysis, prokaryotic production, and respiratory rates) are here chosen as early warning sentinels to detect changes in environmental quality, using an integrated approach with trophic (chlorophyll-a, particulate and dissolved organic matter) measurements.

A sensitive presence/absence test kit for detection of coliforms in drinking water

Coliforms are the most widely accepted bacterial indicator of fecal pollution in water. Several commercially available portable kits make it possible to carry out on-site water quality testing, but are usually costly and often require technical expertise to operate. In developing countries like India, presence/absence test kits like the H2S test kits are commonly used for routine microbiological water quality examination. H2S test kits require an incubation time of more than 24 hours and often gives false positive results. In this research work, we have developed a low-cost and sensitive test kit (ColiPAT) for the detection of coliforms including Escherichia coli in drinking water. The kit can detect very low contamination levels down to 2 coliforms/100 mL within 18 hours at 35 °C. The ColiPAT kit does not lose its sensitivity in the typical indoor temperature range of 27 °C to 35 °C. ColiPAT is also affordable and easy to perform so that local populace can conduct the test independently. This paper presents the results of sensitivity and specificity analysis of a ColiPAT kit and its comparison with the H2S test kits as standardized using Colilert method.

Development of a sensor for the detection of Escherichia coli in brackish waters

Monitoring of bacterial pathogens is important for marine environmental protection, because the presence of these microorganisms can be a serious risk for human health. For this reason, a portable sensor implemented as an electronic embedded system featuring disposable measurement cells was used to evaluate the ability and sensitivity of detection of Escherichia coli (E. coli) as an indicator of fecal pollution in transitional environments and a water sample added with E. coli (10 2 CFU/mL) was assayed. The first result obtained from the laboratory experiment seems promising for the determination of E. coli in environmental samples, though further improvements will be needed for the field application of this sensor in marine and brackish waters.

Meat industry wastewater: microbiological quality and antimicrobial susceptibility of E. coli and Salmonella sp. isolates, case study in Vojvodina, Serbia.

Wastewater from meat processing industries is a fusion of compounds with a high load of organic matter, and pathogen microorganisms like Escherichia coli, and Salmonella sp. The aim of this research was to determine microbiological characteristics of the wastewater discharged from the meat processing industry in order to get a more detailed insight into meat industry wastewater pollution, and to evaluate the resistance of bacterial strains E. coli and Salmonella sp. to antibiotics. The evaluation of the antimicrobial susceptibility was performed on 37 strains of E. coli and eight strains of Salmonella sp. to nine different antibiotics. The number of faecal pollution indicators was very high in all samples. From a total of 37 strains of E. coli, a moderate degree of resistance was shown to tetracycline (37.83%); a low degree of resistance to ampicillin (21.62%), streptomycin (24.32%), trimethoprim-sulfamethoxazol (18.92%) and nalidixic acid (16.22%); and very low to: chloramphenicol (13.51%), ciprofloxacin (2.7%), gentamicin and cefotaxime (0.0%). The results for eight strains of Salmonella sp. show that all eight isolates had some degree of susceptibility to nine tested antimicrobial agents and six strains were fully susceptible to all tested antibiotics.

Inter-Event and Intra-Event Variations of Indicator Bacteria Concentrations in the Storm Sewer System of the City of Östersund, Sweden

AbstractAn episode of microbiological contamination of the drinking water supply of the City of Ostersund, Sweden (63°10′45″N; 14°38′09″E) prompted a study of fecal pollution in four storm drainage catchments discharging in the vicinity of the water treatment plant intake, with the overall aim of determining the presence and variation of standard fecal indicator bacteria strains and total suspended solids (TSS) in stormwater from urban catchments with specific land uses and sizes varying from 5 to 40 ha. Four bacteria strains used as indicators of fecal pollution in Sweden were studied: total coliforms, enterococci, Escherichia coli (E. coli) and Clostridium perfringens (C. perfringens). In dry weather, indicator bacteria concentrations in storm sewers conveying baseflow did not exceed 100 colony forming units (CFU)/100 mL, but during wet weather, total coliform and enterococci concentrations increased 102 to 103 times, compared to those in baseflow, and considerably less in the case of E. coli and C. p...

Significance and Roles of Proteus spp. Bacteria in Natural Environments.

Proteus spp. bacteria were first described in 1885 by Gustav Hauser, who had revealed their feature of intensive swarming growth. Currently, the genus is divided into Proteus mirabilis, Proteus vulgaris, Proteus penneri, Proteus hauseri, and three unnamed genomospecies 4, 5, and 6 and consists of 80 O-antigenic serogroups. The bacteria are known to be human opportunistic pathogens, isolated from urine, wounds, and other clinical sources. It is postulated that intestines are a reservoir of these proteolytic organisms. Many wild and domestic animals may be hosts of Proteus spp. bacteria, which are commonly known to play a role of parasites or commensals. However, interesting examples of their symbiotic relationships with higher organisms have also been described. Proteus spp. bacteria present in soil or water habitats are often regarded as indicators of fecal pollution, posing a threat of poisoning when the contaminated water or seafood is consumed. The health risk may also be connected with drug-resistant strains sourcing from intestines. Positive aspects of the bacteria presence in water and soil are connected with exceptional features displayed by autochthonic Proteus spp. strains detected in these environments. These rods acquire various metabolic abilities allowing their adaptation to different environmental conditions, such as high concentrations of heavy metals or toxic substances, which may be exploited as sources of energy and nutrition by the bacteria. The Proteus spp. abilities to tolerate or utilize polluting compounds as well as promote plant growth provide a possibility of employing these microorganisms in bioremediation and environmental protection.

Ultrafiltration and Microarray for Detection of Microbial Source Tracking Marker and Pathogen Genes in Riverine and Marine Systems

Pathogen identification and microbial source tracking (MST) to identify sources of fecal pollution improve evaluation of water quality. They contribute to improved assessment of human health risks and remediation of pollution sources. An MST microarray was used to simultaneously detect genes for multiple pathogens and indicators of fecal pollution in freshwater, marine water, sewage-contaminated freshwater and marine water, and treated wastewater. Dead-end ultrafiltration (DEUF) was used to concentrate organisms from water samples, yielding a recovery efficiency of >95% for Escherichia coli and human polyomavirus. Whole-genome amplification (WGA) increased gene copies from ultrafiltered samples and increased the sensitivity of the microarray. Viruses (adenovirus, bocavirus, hepatitis A virus, and human polyomaviruses) were detected in sewage-contaminated samples. Pathogens such as Legionella pneumophila, Shigella flexneri, and Campylobacter fetus were detected along with genes conferring resistance to aminoglycosides, beta-lactams, and tetracycline. Nonmetric dimensional analysis of MST marker genes grouped sewage-spiked freshwater and marine samples with sewage and apart from other fecal sources. The sensitivity (percent true positives) of the microarray probes for gene targets anticipated in sewage was 51 to 57% and was lower than the specificity (percent true negatives; 79 to 81%). A linear relationship between gene copies determined by quantitative PCR and microarray fluorescence was found, indicating the semiquantitative nature of the MST microarray. These results indicate that ultrafiltration coupled with WGA provides sufficient nucleic acids for detection of viruses, bacteria, protozoa, and antibiotic resistance genes by the microarray in applications ranging from beach monitoring to risk assessment.

Guidelines for Recreation Water Quallity in Brazil, USA and Canada: Enteric Viruses as Faecal Pollution Indicators

Investigation of the quality of drinking waters and recreational has become an important research area in world. However, in most countries there is no consensus on what parameters should be analyzed to establish that quality. Article summarizes conceptual basis and principles that guided revision of brazilian legislation, contextualizing with guidelines established for monitoring water quality in the US, Canada and Brazil. Brazilian potability standard is analyzed together with these countries, especially with regard to microbiological analysis, including group of enteric viruses. This evaluation, highlights huge disparities between standards in various countries, especially in terms of microbiological standards. In Brazil, only the Ministry of Health recommends that enteric viruses are monitored, but does not set limits for these pathogens, as the resolutions of the National Environmental Council does not cite the virus in their regulations. In US and Canada, health and environmental guidelines are more insightful and include a range of species of microorganisms in their monitoring, including group of enteric viruses.