Important Species Research Articles

Reproductive biology of long-whiskered catfish (Mystus aor) relative to temperature and precipitation from the Kaptai Lake of Bangladesh.

Life-history information is necessary for effective conservation, aquaculture development and broodstock management of fishing populations, especially for fish with significant economic exploitation. Aiming to characterise the life-history traits in relation to the environmental parameters of the long-whiskered catfish, Mystus aor, a commercially important species from Kaptai Lake, Bangladesh, different life-history data were analysed. The monthly condition factor (K) ranged from 1.15 to 1.41, and the relative condition factor (Kn) ranged from 0.14 to 0.25. The estimated relative fecundity was 18474-55504 eggs/per fish, and the maximal oocyte diameter was found in May (0.83 ± 0.11μm). The lengths at first sexual maturity (Lm) for male and female M. aor were 49.5 cm and 54.1 cm, respectively. The GSI was peaked in May for both males and females, and histological analysis also revealed the presence of yolk granules and several mature spermatids in April and May in both sexes. Analysis of environmental data over 40 years in the Kaptai lake ecosystem indicate the significant increase in the precipitation rate in spawning month which is highly correlated with the spawning season. The findings of the current study will serve as a baseline for the conservation and broodstock management in the Kaptai Lake of Bangladesh.

SlSPA3 regulates the nuclear abundance of SlUVR8 in tomato.

Tomato (Solanum lycopersicum L.) is an important model plant species in photomorphogenesis research. Ultraviolet B (UV-B) induces the dissociation of homodimers of the photoreceptor UV RESISTANCE LOCUS8 (UVR8) into monomers, which translocate into the nucleus. Nuclear accumulation of UVR8 is a prerequisite for its signaling function. Previous studies have reported that SUPPRESSOR OF PHYTOCHROME A-105 (SPA) family members may regulate UV-B signaling in Arabidopsis (Arabidopsis thaliana); however, the underlying mechanism is unknown. Here, we show that the tomato genome encodes four SPA (SlSPA) orthologs. Genome-edited Slspa3 mutants exhibited enhanced photomorphogenic responses in white light, suggesting that SlSPA3 inhibits general photomorphogenesis. By contrast, UVR8-mediated gene expression in response to UV-B was compromised in Slspa3 mutants, suggesting that SlSPA3 promotes UV-B signaling. UV-B-induced nuclear accumulation of UVR8, which is essential for UV-B signaling, was reduced in the Slspa3 mutants. Moreover, UV-B-induced nuclear accumulation of UVR8 was also reduced in the Arabidopsis spa1 spa2 spa3 and spa1 spa2 spa4 triple mutants, indicating a conserved mechanism in these two species. Notably, spa1 spa2 spa4 exhibited normal UV-B-induced interaction between UVR8 and the plant morphogenesis repressor CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1). This suggests that the well-established mechanisms of UVR8 nuclear retention remained unaffected in spa1 spa2 spa4. Thus, our work uncovered a potentially unrecognized mechanism by which SPA proteins regulate UV-B signaling through the promotion of UVR8 nuclear abundance in land plants.

The Effectiveness of Biofloc Technology and Its Application Prospects in Sea Cucumber (Apostichopus japonicus) Aquaculture: A Review

This review aims to advance the development of biofloc technology (BFT), providing more sustainable and efficient practices for the farming of the Japanese sea cucumber (Apostichopus japonicus). BFT is a sustainable aquaculture method that promotes nutrient recycling and effective carbon source management, offering significant advantages such as improving water quality, enhancing growth performance, and boosting the physiological activity and disease resistance of cultured animals. In A. japonicus farming, the optimal carbon source is glucose, and the ideal carbon-to-nitrogen (C/N) ratio ranges between 15 and 20. Microbial additives, such as the Bacillus species, have been shown to enhance biofloc formation and growth, as well as the immune responses in A. japonicus. However, the technology also faces limitations, including finding suitable biofloc culture protocols that match the physiological habits of A. japonicus and potential challenges with biofloc stability under varying environmental conditions. Based on existing research, this review discusses these limitations in the farming of A. japonicus. Additionally, it compares biofloc farming models for other economically important aquatic species. By addressing these key aspects, this review offers insights to enhance BFT performance, ultimately contributing to more efficient and sustainable A. japonicus aquaculture practices.

Ultimate Fighting Crab: Agonistic Behaviour, Dominance, and Recognition in the Edible Crab, Cancer pagurus (L.)

Edible crabs (Cancer pagurus) are an economically important species for Scottish inshore fisheries, with an estimated annual landing value of GBP 16 million (2023). Research into the behaviour, particularly agonistic behaviour, of this species is currently lacking. This paper aims to investigate behaviour, social interactions, potential hierarchies, and the impact of claw size on the outcomes of agonistic interactions of male C. pagurus through behavioural trials and retrials. Crabs were semi-randomly assigned to pairs (based on allocated condition index rating) and introduced to one another in trial tanks. Each pair underwent two trials, 24 h apart (the “trial” and “retrial”). Analyses of video records of agonistic bouts revealed that 77% of retrials were won by the initial victors, with a significant decrease in fight time between trials and retrials. Fight time was not correlated with weapon size (claw length, height, and depth). There were no differences in weapon size of winners and losers of bouts. Winners exhibited a significantly higher frequency of aggressive and dominant behaviours (approach, aggressive contact, threat displays, and mounting), and losers exhibited higher frequencies of submissive behaviours (withdrawal, retracting limbs, and remaining motionless). These results suggest that individual behaviour may play more of a role in dominance than size or other morphometric characteristics.

Characterization of Bioactive Phenolic Compounds Extracted from Hydro-Distillation By-Products of Spanish Lamiaceae Plants

Plants of the Lamiaceae family are widely used for the extraction of essential oils, and this industry generates a large number of solid residues as by-products, which contain non-volatile valuable compounds. The aim of this work was to identify and quantify the phenolic compounds present in these solid residues from different important Spanish species of Lamiaceae to characterize and valorize them. Forty-seven phenolic compounds were identified by HPLC-DAD-MS and quantified by HPLC-DAD. Different concentrations and types of phenolic compounds were found between the solid residues. The Rosmarinus officinalis extracts showed the highest total phenolic content due to their high phenolic terpene concentrations. The Thymus mastichina extracts were characterized by kaempferol and flavanones, and some flavones were derived from luteolin and apigenin. Finally, the sample Lavandula and Salvia lavandulifolia extracts presented the lowest content of most phenolic compounds, with the exception of some phenolic acids, such as danshensu, salvianolic acid A, and glucosides of hydroxycinnamic acids. Therefore, this work provides information on the quantification of a large number of phenolic compounds using a simple, sensitive, reproducible, and accurate methodology. In addition, the results indicate that these solid residues still contain important amounts of different polyphenols, which are antioxidants and can be used in different industries.

The influence of tree species on small scale spatial soil properties and microbial activities in a mixed bamboo and broad-leaved forest

Soil enzyme activity and microbial biomass play a critical role in myriad ecological processes. Bamboo and broad-leaved mixed forests have received widespread attention as important forestry models for ecological restoration and sustainable development; however, our understanding the influences of broad-leaved tree species in mixed bamboo forests on soil properties and microbial activity remains unclear. Here we sampled twenty-seven spatially interspersed stands of bamboo-Castanopsis chinensis Hance mixed forest (CCB), bamboo-Alniphyllum fortune (Hemsl.) Makino mixed forest (AFB), and bamboo-Choerospondias axillaris mixed forest (CAB), with different mixing ratios (0–10 %, 10–20 %, 20–40 % canopy proportions) in subtropical China, to examine the effects of tree species and mixed ratio on soil nutrients, microbial biomass, and enzyme activity. We found that the different forests exhibited variations in soil nutrient levels. CAB forests exhibit notably higher mean C, N, and P contents than AFB and CCB, particularly at a 10–20 % mixing ratio where SOC concentration reached 46.50 g/kg. CAB forests demonstrated significantly higher activities of invertase (mean 701.83U/g), urease (8393.44U/g), and catalase (501.73U/g) compared to AFB and CCB forests, with peak enzyme activities observed at a 10–20 % mixing ratio. Soil microbial biomass C and N were notably greater in CAB and CCB forests than in AFB forests. CAB forests also exhibited the highest soil microbial biomass P (mean 48.68 mg/kg), which rose consistently with an increased mixing ratio. Multiple factor analysis revealed that the enzyme activities were significantly correlated with the annual growth of fine roots in the forest and were positively correlated with resident C, total N, total P, C: N, and C: P. Overall, the results provide insights into the importance of tree species and crown size in bamboo and broadleaved tree mixed forest in soil features and the microbial activity while providing management guidance for the selection of mixed tree species for sustainable management of bamboo forest soil microenvironment.

Seasonal changes in the dietary patterns and reproductive aspects of deep-water rose shrimp Parapenaeus longirostris in the central Adriatic Sea

The deep-water rose shrimp Parapenaeus longirostris is one of the most important commercial species caught by trawl fisheries in the Mediterranean Sea. The species has a warm-water affinity and its landings are increasing in the whole basin. Detailed information on its trophic ecology, niche width and role within demersal food webs is dated or lacking in the Adriatic Sea, the most exploited basin of the Mediterranean. Therefore, to detect seasonal changes in diet and trophic levels, seasonal samplings were conducted in this area from January to December 2021, collecting 400 specimens, and integrating information from both stomach content analysis and stable isotope analyses (SIA). To identify potential links between the biological cycle of the species and fluctuations in energy demand, seasonal changes in fullness, as a proxy of feeding intensity, and gonadosomatic and hepatosomatic indices were assessed. The deep-water rose shrimp is confirmed to be a benthic feeder that predominantly preys on molluscs, crustaceans, fish, echinoderms and polychaetes. According to SIA, P. longirostris is defined as a secondary consumer. Observed seasonal dietary changes precede the reproductive periods, likely due to the need for more energetic prey.

Phenotyping of a new yeast mapping population reveals differences in the activation of the TORC1 signalling pathway between wild and domesticated yeast strains

Domestication can be understood as a symbiotic relationship that benefits both domesticator and domesticated species, involving multiple genetic changes that configure the phenotype of the domesticated species. One of the most important domesticated species is the yeast Saccharomyces cerevisiae, with both domesticated strains used for different fermentations processes for thousands of years and wild strains existing only in environments without human intervention; however, little is known about the phenotypic effects associated with its domestication. In the present work, we studied the effect of domestication on yeast TORC1 activation, a pleiotropic signalling pathway conserved across the eukaryotic domain. To achieve this goal, we improved a previously generated methodology to assess TORC1 activation, which turned out to be as effective as the original one but also presents several practical advantages for its application (such as facilitating confirmation of transformants and putting the Luc reporter gene under the control of the same PRPL26A promoter for each transformed strain). We then generated a mapping population, the so-called TOMAN-G population, derived from the “1002 Yeast Genomes Project” population, the most comprehensive catalogue of the genetic variation in yeasts. Finally, strains belonging to the TOMAN-G population were phenotyped for TORC1 activation, and then we compared the results obtained between yeast strains with different ecological origins, finding differences in TORC1 activation between wild and domesticated strains, particularly wine strains. These results are indicative of the effect of domestication on TORC1 activation, specifically that the different evolutionary trajectories of wild and domesticated strains have in fact caused differences in the activation of this pathway; furthermore, the phenotypic data obtained in this work could be used to continue underlying the genetic bases of TORC1 activation, a process that is still not fully understood, using techniques such as GWAS to search for specific genetic variants underlying the observed phenotypic variability and phylogenetic tree inferences to gain insight into the evolutionary relationships between these genetic variants.

Molecular evolution and genetic diversity of defective chorion 1 in Anastrepha fraterculus and Anastrepha obliqua (Diptera, Tephritidae).

The family Tephritidae comprises numerous fruit fly species, some of which are economically significant, such as several in the genus Anastrepha. Most pest species in this genus belong to the fraterculus group, characterized by closely related species that are difficult to differentiate due to recent divergence and gene flow. Identifying genetic markers for their study is paramount for understanding the group's evolution and eventual phytosanitary control. Because there is variation in eggshell morphology among species in the genus, the study of the rapidly evolving defective chorion 1 (dec-1) gene, which is crucial for chorion formation and reproduction, could provide relevant information for Anastrepha differentiation. We compared transcriptome sequences of dec-1 from two of the most important pest species in the genus, Anastrepha fraterculus and Anastrepha obliqua to dec-1 sequences from Anastrepha ludens, which was used for structure prediction. Furthermore, we amplified a conserved exon across populations of these species. These data revealed three alternative transcripts in A. fraterculus and A. obliqua, consistent with patterns found in other Tephritidae; we obtained orthologous sequences for these other tephritids from NCBI to investigate patterns of selection affecting this gene at different hierarchical levels using different methods. These analyses show a general pattern of purifying selection across the whole gene and throughout its history at different hierarchical levels, from populations to more distantly related species. That notwithstanding, we still found evidence of positive and episodic diversifying selection at different levels. Different parts of the gene have shown distinct evolutionary rates, which were associated with the diverse proproteins produced by posttranslational changes of DEC-1, with proproteins that are incorporated in the chorion earlier in egg formation being in general more conserved than others that are incorporated later. This correlation appears more evident in certain lineages, including the branch that separates Anastrepha, as well as other internal branches that differentiate species within the genus. Our data showed that this gene shows remarkable variation across its different exons, which has proven to be informative at different evolutionary levels. These changes hold promise not only for studying differentiation in Anastrepha but also for the eventual management of selected pest species.

Evaluating corn, tall fescue and canola growth on sediments dredged from the Lorain Harbor

AbstractSoil degradation is a worldwide problem, causing the declining performance of many plant species. Recently, the application of sediments dredged from aquatic waterways has received attention for their potential as an organic amendment to revive degraded agricultural soils. In Ohio, dredged sediment research has largely focused on the success of corn (Zea mays) or soybean (Glycine max) following the application of dredged sediments from the Toledo Harbor, neglecting the potential for dredged sediments from the other eight harbors and waterways to change plant performance as well as failing to quantify benefits for other commonly grown crops in the region. In a greenhouse experiment, we applied dredged sediments from the Lorain Harbor to degraded agricultural soils across a variety of application ratios and quantified changes in germination, height over the growing season, final biomass, and yield for canola (Brassica napus), tall fescue KY 31 (Festuca arundinacea), and corn to better understand the potential for dredged sediments from this location to increase performance for a variety of regionally important plant species. Overall, plants grown on agricultural soils supplemented with dredged sediments from the Lorain Harbor consistently grew taller, faster, and were larger than the 100% dredged sediment treatments. Furthermore, both corn and tall fescue grown on agricultural soil supplemented with dredged sediments had greater yield compared to their counterparts grown on unamended agricultural soil. In whole, outcomes from this research contribute to a growing body of research that support the use of dredged sediments as a soil amendment for agricultural soils.

Effects of temperature on early life-stages of Alaria marginata, a commercially important high-latitude kelp species

Effects of temperature on early life-stages of Alaria marginata, a commercially important high-latitude kelp species

Pinus densiflora var. ussuriensis Forest Alliance

The Pinus densiflora var. ussuriensis forest is a unique pine forest type in Northeast China. The species grows normally under extremely adverse conditions because it has a strong tolerance to poor soils and drought. It also benefits the ecological environment significantly through water conservation, soil improvement and windbreak and sand fixation, thus making it an important pioneer species for improving site conditions. This paper systematically analyzes the geographical distribution, ecological and community characteristics, species composition and classification of Pinus densiflora var. ussuriensis forests in China through field surveys and literature review. The main findings are: (1) Based on the dominant species of each layer, Pinus densiflora var. ussuriensis forests can be divided into two categories of associations: Pinus densiflora var. ussuriensis - Rhododendron dauricum - Carex callitrichos association and Pinus densiflora var. ussuriensis + Quercus mongolica - Lespedeza bicolor - Carex caespitosa association. (2) According to sample plot surveys, a total of 134 vascular plant species, belonging to 59 families and 104 genera, were recorded in natural Pinus densiflora var. ussuriensis forests. Amongst them were one fern species, two gymnosperm species and 131 angiosperm species. (3) The composition of life forms in Pinus densiflora var. ussuriensis forests is dominated by terrestrial herbs, with fewer woody plants and with vines making up the smallest proportion. (4) The Pinus densiflora var. ussuriensis forests located on the hillocks of Xingkai Lake are in decline. If the soil in this area continues to increase in wetness, this community may eventually evolve into a broad-leaved mixed forest.

Sole and co-exposure toxicity of commercial formulations ethoprophos and bispyribac-sodium to Oreochromis niloticus: Assessment of oxidative stress, genotoxicity, and gill ultrastructure.

Aquatic organisms are simultaneously exposed to multiple hazardous chemicals that can be released into water bodies. The current study aimed to evaluate the effect of sublethal concentration (1/50 96h-LC50) of two formulated pesticides: ethoprophos, bispyribac-sodium, and their combination for 1, 2, 3, and 4weeks on oxidative stress, genotoxic response, and gill morphology in Nile tilapia. This study is the first to demonstrate the toxic effects of ethoprophos and bispyribac-sodium mixture on the commercial important species, Oreochromis niloticus. The results showed that the 96h-LC50 values of ethoprophos and bispyribac-sodium were 4.8 and 0.064mg/L, respectively. Additionally, exposure to individual or combined pesticides induced a significant increase in the level of malondialdehyde (MDA), glutathione S-transferase (GST), and 8-hydroxy-2-deoxyguanosine (8-OHdG), as well as a notable decline in reduced glutathione (GSH), superoxide dismutase (SOD), catalase (CAT), and glutathione peroxidase (GPx) levels at all time of exposure. Furthermore, there were alterations in ultrastructure of the gill samples, including erosive lesions on the primary and secondary lamellae, fusion of microridges, and excessive mucus secretions on the epithelium. The data clearly demonstrate that the negative effects of the tested compounds are time-dependent and are more severe in combination than in a single compound. Collectively, our results indicated that the interaction of ethoprophos and bispyribac-sodium might be largely synergistic and provide new insights into the molecular mechanisms of fish confronting these substances.

Levels and Classification of Microplastics and Their Impact on the Wellbeing of Selected Commercially Important Fish Species in Kisumu Bay, Lake Victoria.

Microplastics (MPs) are emerging pollutants of concern in aquatic ecosystems. Fish ingest MPs accidentally during normal feeding because they resemble prey or by ingesting prey that previously consumed them. Despite severe plastic pollution in Africa, some countries, including Kenya have implemented laws to curb this pollution menace. MPs have scantly been studied in African freshwaters. This study provides empirical data and describes the levels of MPs in four commercially important fish species in Lake Victoria. A total of 95 fish samples were collected from four sampling sites (inshore-offshore waters) between March and May 2022. Microscopy and Attenuated Total Reflectance Fourier Transformed Infrared (ATR-FTIR) spectroscopy methods were used to identify MPs. In this study, 62 out of 95 (65.26%) of the gastrointestinal tracts of the sampled fish contained MPs. The four species showed different proportions of detected MPs among the sampled individuals: 75.00% (Clarias gariepinus), 75.00% (Synodontis victoriae), 71.43% (Lates niloticus), and 59.26% (Oreochromis niloticus). Polystyrene (PS) and poly (perfluorobutadiene) were the main plastic polymers in the fish samples. The condition factors estimated for O. niloticus, S. victoriae, and L. niloticus were > 1 and < 1 for C. gariepinus, respectively. Positive correlations were observed between microplastic numbers and fish length and microplastic numbers and fish weight. However, the low R2 values obtained implied no strong relationship exists between these parameters. These findings provide evidence of microplastic contamination in fish in Kisumu Bay.

Survey of Thrips (Thysanoptera) Associated with Four Berry Crops in Mexico1

Abstract Mexico is one of the major exporters of a variety of berries worldwide. Thrips (Thysanoptera) are highly attracted to berry crops, and several species can become serious pests that limit berry yield. Given the pest status of thrips in berry production and the magnitude and importance of berries for export in Mexico, this study was conducted to survey and identify the thrips fauna associated with commercial berry orchards in Mexico. We sampled berry plants in 41 commercial plantations of blackberry (Rubus spp.), blueberry (Vaccinium spp.), raspberry (Rubus spp.), and strawberry (Fragaria × ananasa) in Guanajuato, Jalisco, Michoacán, and Sinaloa during spring and summer 2020. Our study collected 4,394 thrips specimens belonging to 19 species of thrips. Of those, 53.7% were collected from blackberry, 16.1% from blueberry, 15.5% from strawberry, and 14.8% from raspberry. The predominant species in the four berry crops was Frankliniella occidentalis (Pergande). Its relative abundance with respect to other species of thrips collected was 52.9% in blueberry, 69% in raspberry, 79.6% in blackberry, and 88.7% in strawberry. The second most abundant species was Scirtothrips dorsalis Hood, varying from 2.6% in strawberry to 24.6% in blueberry. Other important phytophagous species recorded were Frankliniella cephalica (Crawford) and Frankliniella gossypiana Hood. These four species are invasive, polyphagous, and widespread in Mexico; thus, economic damage by one or more of these species can be expected in locales where management measures are not appropriately applied to avoid economic losses. Data gathered in this survey, coupled with information provided by related studies conducted in Mexico, should serve as a basis for further research dealing with monitoring and management of thrips populations.

Contrasting responses of commercially important Northwest Atlantic bivalve species to ocean acidification and temperature conditions

Modern calcifying marine organisms face numerous environmental stressors, including overfishing, deoxygenation, increasing ocean temperatures, and ocean acidification (OA). Coastal marine settings are predicted to become warmer and more acidic in coming decades, heightening the risks of extreme events such as marine heat waves. Given these threats, it is important to understand the vulnerabilities of marine organisms that construct their shells from calcium carbonate, which are particularly susceptible to warming and decreasing pH levels. To investigate the response of four commercially relevant bivalve species to OA and differing temperatures, juvenile Mercenaria mercenaria (hard shell clams), juvenile Mya arenaria (soft shell clams), adult and juvenile Arctica islandica (ocean quahog), and juvenile Placopecten magellanicus (Atlantic sea scallops) were grown in varying pH and temperature conditions. Species were exposed to four controlled pH conditions (7.4, 7.6, 7.8, and ambient/8.0) and three controlled temperature conditions (6, 9, and 12°C) for 20.5 weeks and then shell growth and coloration were analyzed. This research marks the first direct comparison of these species’ biological responses to both temperature and OA conditions within the same experiment. The four species exhibited varying responses to temperature and OA conditions. Mortality rates were not significantly associated with pH or temperature conditions for any of the species studied. Growth (measured as change in maximum shell height) was observed to be higher in warmer tanks for all species and was not significantly impacted by pH. Two groups (juvenile M. arenaria and juvenile M. mercenaria) exhibited lightening in the color of their shells at lower pH levels at all temperatures, attributed to a loss of shell periostracum. The variable responses of the studied bivalve species, despite belonging to the same phylogenetic class and geographic region, highlights the need for further study into implications for health and management of bivalves in the face of variable stressors.

Antifungal Associations with a Polyelectrolyte Promote Significant Reduction of Minimum Inhibitory Concentrations against Opportunistic Candida spp. Strains.

The current global scenario presents us with a growing increase in infections caused by fungi, referred to by specialists in the field as a "silent epidemic", aggravated by the limited pharmacological arsenal and increasing resistance to this therapy. For this reason, drug repositioning and therapeutic compound combinations are promising strategies to mitigate this serious problem. In this context, this study investigates the antifungal activity of the non-toxic, low-cost and widely available cationic polyelectrolyte Poly(diallyldimethylammonium chloride) (PDDA), in combination with different antifungal drugs: systemic (amphotericin B, AMB), topical (clioquinol, CLIO) and oral (nitroxoline, NTX). For each combination, different drug:PDDA ratios were tested and, through the broth microdilution technique, the minimum inhibitory concentration (MIC) of these drugs in the different ratios against clinically important Candida species strains was determined. Overall, PDDA combinations with the studied drugs demonstrated a significant increase in drug activity against most strains, reaching MIC reductions of up to 512 fold for the fluconazole resistant Candida krusei (Pichia kudriavzevii). In particular, the AMB-PDDA combination 1:99 was highly effective against AMB-resistant strains, demonstrating the excellent profile of PDDA as an adjuvant/association in novel antifungal formulations with outdated conventional drugs.

Population genomics informs the management of harvested snappers across north-western Australia

Failure to consider population structure when managing harvested fishes increases the risk of stock depletion, yet empirical estimates of population structure are often lacking for important fishery species. In this study, we characterise genetic variation in single nucleotide polymorphisms (SNPs) to assess population structure for three harvested species of tropical snappers across the broad (up to 300 km wide) and extensive (~ 4000 km) continental shelf of north-western Australia. Comparisons across ~ 300 individuals per species, showed remarkably similar patterns of genetic structure among Lutjanus sebae (red emperor), L. malabaricus (saddletail snapper) and Pristipomoides multidens (goldband snapper) despite subtle differences in biological and ecological traits. Low levels of genetic subdivision were reflected in an isolation by distance relationship where genetic connectivity increased with geographic proximity. This indicates extensive but not unlimited dispersal across the north-western Australian shelf. Our findings provide evidence of connectivity between current management areas, violating the assumption of multiple independent stocks. Spatial stock assessment models may be more suitable for the management of these species however demographic connectivity rates cannot be accurately estimated from the conventional population genetic approaches applied in this study. We recommend that managers aim to maintain adequate spawning biomass across current management areas, and assess stocks at finer scales, where practical.

Investigating environmental and geographical factors affecting iodine concentrations in Australian wheat (Triticum aestivum L.) grain

Iodine is an essential micronutrient for human nutrition, though it is found in relatively low concentrations in many important crop species. Wheat (Triticum aestivum L.) is a common staple crop worldwide, and as such could be an important source of dietary iodine due to its widespread consumption. However, little is known about iodine concentrations in wheat grain grown under rainfed field conditions, nor the impact of growing region or environment on these concentrations. Therefore, this paper had three objectives; (1) quantify the iodine concentration in a popular variety of wheat cultivated across the wheat belt of three Australian States (Western Australia, South Australia and Victoria) over two winter seasons (2) determine the influence of distance from the coast, rainfall, elevation, soil type and pH and grain yield on wheat grain iodine concentrations and (3) identify geographical areas where iodine concentrations of wheat grains are low enough that biofortification with iodine would be advantageous for human health outcomes. We sampled iodine concentrations of a single cv. Scepter at 125 sites from the winter season 2020 (65 sites) and 2021(60 sites), to investigate environmental and geographical effects on wheat grain iodine concentrations. Iodine concentrations were measured using triple quadrupole inductively coupled plasma mass spectrometer (ICP MS/MS). We found that the elevation and the region (State) of growing sites were the most significant predictors of iodine concentration, along with the interaction between rainfall and topsoil texture. However, very low concentrations of iodine (5–24 μg/kg) were detected in all samples tested, indicating that even wheat grown under advantageous environmental and geographic conditions in southern Australia would be unlikely to represent an important source of dietary iodine. This emphasises the need to consider biofortification strategies to improve iodine concentrations in Australian grown wheat to improve the dietary uptake of this essential micronutrient by human consumers.

Identification of Genes and Long Non-Coding RNAs Putatively Related to Portunus trituberculatus Sex Determination and Differentiation Using Oxford Nanopore Technology Full-Length Transcriptome Sequencing.

The swimming crab (Portunus trituberculatus) is an economically important species in China, and its growth traits show obvious sexual dimorphism. Thus, it is important to study the mechanism of sex determination and differentiation in this species. Herein, we identified 2138 differentially expressed genes and 132 differentially expressed long non-coding RNAs (lncRNAs) using Oxford Nanopore Technology full-length transcriptome sequencing. We predicted 561 target genes of the differentially expressed lncRNAs according to their location and base pair complimentary principles. Furthermore, pathways related to sex determination, differentiation, and reproduction were enriched for lncRNAs according to gene ontology and Kyoto Encyclopedia of Genes and Genomes analyses. This indicated that lncRNAs might play regulatory roles in these pathways. Our results could form the basis for future studies of sex determination and differentiation in P. trituberculatus.