Seaweeds are used in traditional agriculture practices because of their beneficial effects. Recently, the rising demand for organically grown foods has amplified the use of organic fertilizers such as seaweed extracts. Despite their beneficial effects, few studies have reported information about compounds in seaweed extracts that are responsible for these benefits. Thus, the aim of this study was to evaluate the potential relationships between the components and secondary metabolites in four seaweed liquid extracts from Eisenia arborea, Macrocystis pyrifera, Padina caulescens, and Sargassum horridum and their biostimulant activity through changes in the germination, growth, and protein content of tomato seedlings (Solanum lycopersicum). The E. arborea and S. horridum extracts showed similar compositions (ash, organic carbon, bicarbonates, and chlorides), minerals (Ca, Fe, and Cu) and secondary metabolites (triterpenes and saponins), albeit with different component concentrations. The chemical composition of the P. caulescens extract was significantly different from those of the other extracts; it was characterized by high levels of total nitrogen, phenols, and carbohydrates. Almost all seaweed extracts had beneficial effects on seed germination and seedling length, except the S. horridum extract that inhibits germination. The hierarchical clustering plots and principal component analysis indicated that germination and protein content are related to the presence of sterol. Shoot length was closely related to mineral levels (K, Zn, B, Na) and the C:N ratio, whereas radicle length was closely related to the content of nitrogen, carbohydrates, phenols, and flavonoids in the seaweed extracts. However, the underlying mechanisms are still unclear and require further studies.