Heterocyclic Core Research Articles

Synthesis and antimycotic activity of new derivatives of imidazo[1,2-a]pyrimidines

The heterocyclic core of imidazo[1,2-a]pyrimidine was formed in satisfactory yields as a result of the interaction of the readily available 2-aminoimidazole with N-substituted maleimides or N-arylitaconimides. The mechanism of the studied processes was postulated basing on experimental data, HPLC–MS analysis of reaction mixtures, and quantum chemical calculations. Molecular docking results of the obtained imidazo[1,2-a]pyrimidines, when compared with voriconazole, a drug already in clinical use, suggest that they may possess antifungal activity against Candida albicans.

Synthesis, biological evaluation and in silico study of 4-(benzo[d]thiazole-2-yl) phenols based on 4-hydroxy coumarin as acetylcholinesterase inhibitors

Alzheimer’s disease, characterized by cognitive decline and memory loss, is associated with decreased acetylcholine levels due to acetylcholinesterase (AChE) activity. Compounds containing a coumarin heterocyclic core coupled with thiazole exhibit excellent acetylcholinesterase inhibitory activity. In this work, we designed and synthesized a series of 4-(benzo[d]thiazole-2-yl) phenols based on 4-hydroxycoumarin. The compounds were synthesized and their inhibitory activities were evaluated through in vitro biological assays. Of the compounds investigated, 3i exhibited the strongest inhibitory activity, with an IC50 value of 2.7 µM. Molecular docking and molecular dynamics simulations were employed to elucidate the binding interactions and stability of the synthesized compounds with AChE. The results demonstrated promising inhibitory activity, suggesting potential therapeutic applications for Alzheimer’s disease. This research contributes to the development of coumarin-based heterocyclic compounds as effective AChE inhibitors.

Two-Fold Oxidative Coupling of Furan with Indole Provides Modular Access to a New Class of Tetra-(Hetero)Arylated Furans with Up to Four Different Substituents.

Highly arylated propeller-shaped heteroarenes constitute an intriguing class of molecular scaffolds for material science applications. Among these, tetraarylated furans demonstrate differentiated properties as compared to other similar heterocyclic cores. The synthetic complexity to access tetraarylated furans increases significantly with increasing number of different peripheral aryl groups. There are only a very limited number of methodologies available to access furans with four different (hetero)aryl substituents. Notably, none of these involve direct oxidative coupling on the furan core as the method of choice. Herein, we report the first methodology based on a sequential two-fold oxidative C-C coupling of furans with indoles to access bis(indolyl)furans (BIFs) - a new class of 'extremely congested' tetra-(hetero)arylated furans with up to four different substituents. The reaction is mediated by inexpensive, earth-abundant FeCl3⋅6H2O and displays high efficiency, wide substrate scope, modularity and aqueous compatibility. Moreover, we also present the first validation of the distinct aggregation-caused quenching (ACQ) property of the tetraarylated furans beyond only phenyls as peripheral groups and disclose new mechanistic underpinnings for the same.

Design, Synthesis, Biological Evaluation and Molecular Docking Studies of New Thiazolidinone Derivatives as NNRTIs and SARS-CoV-2 Main Protease Inhibitors.

HIV-1 remains a major health problem worldwide since the virus has developed drug-resistant strains, so, the need for novel agents is urgent. The protein reverse transcriptase plays fundamental role in the viruses' replication cycle. FDA approved Delavirdine bearing a sulfonamide moiety, while thiazolidinone has demonstrated significant anti-HIV activity as a core heterocycle or derivative of substituted heterocycles. In this study, thirty new thiazolidinone derivatives (series A, B and C) bearing sulfonamide group were designed, synthesized and evaluated for their HIV-1 RT inhibition activity predicted by computer program PASS taking into account the best features of available NNRTIs as well as against SARS-COV-2 main protease. Seven compounds showed good anti-HIV inhibitory activity, with two of them, C1 and C2 being better (IC50 0.18 μΜ & 0.12 μΜ respectively) than the reference drug nevirapine (IC50 0.31 μΜ). The evaluation of molecules to inhibit the main protease revealed that 6 of the synthesized compounds exhibited excellent to moderate activity with two of them (B4 and B10) having better IC50 values (0.15 & 0.19 μΜ respectively) than the reference inhibitor GC376 (IC50 0.439 μΜ). The docking studies is coincides with experimental results, showing good binding mode to both enzymes.

Enhancing perovskite solar cells performance through tailored design: pyridine-functionalized phenothiazine derivatives with modified end-capped acceptor moieties

Abstract Future energy resources are being developed using clean and renewable energies since these sources offer environmentally friendly and sustainable choices to traditional sources like fossil fuels. Among various renewable energy sources, solar energy is becoming increasingly efficient with advancements in organic photovoltaic systems. Organic semiconductor materials, which require high electron affinity and possess desirable optical and electronic properties, are crucial for these systems. Researchers are constantly trying to increase the role of photovoltaic materials in optoelectronic applications. With current energy demands, there is a shift from traditional solar cells to perovskite photovoltaic materials due to their significant contributions to renewable energy. Therefore, we have designed a new stream of donor- π -acceptor (D- π -A) type pyridine functionalized phenothiazine derivates-based donor materials, resulting in nine fabricated HTMs (PT1-PT9), by substituting the terminals with thiophene and acceptors moieties respectively to enhance the photovoltaic properties of perovskite solar cells (PSCs). All newly proposed materials were computationally examined to estimate their optoelectronics, geometrical, and photovoltaic properties using quantum chemical approach, and then compared to the reference. For organic hole-transporting materials, a heterocyclic phenothiazine core (PTZ) has been proven effective as it has feasible structure modifications, excellent electron-donating properties, and straightforward synthesis. The study of electronic parameters (density of state, frontier molecular orbitals, and electrostatic potential ESP), optical properties (light harvesting efficiency, absorption maxima, dipole moment, and first excitation energies) and charge transfer characteristics (electron–hole overlap, transition density matrix) of designed materials revealed that there is an increase in absorption range under the influence of terminal acceptor groups, with lowering the bandgap values compared to the reference. A density of state (DOS) graph and HOMO–LUMO schema are evidence of the electron-withdrawing effect of acceptor moieties. Transition density matrix (TDM) analysis proves reliable charger transfer in designed molecules. Reorganization energy values for designed molecules are lower than the reference making charge transfer carriers more efficient. Additionally, solvation-free energy values (−17.28 to −33.19 Kcalmol−1) and higher dipole moments suggest better surface-wetting and solubility properties. In general, the fabricated materials have exceptional charge mobilities with higher absorption and reduced band gap values that make them suitable and stable candidates for photovoltaic devices.

Tyramine Derivatives as Versatile Pharmacophores With Potent Biological Properties: Sex Hormone-Binding Globulin Inhibition, Colon Cancer Antimigration, and Antimicrobial Activity.

Guided by the idea that the presence of a heterocyclic aromatic core and tyramine moiety, under the umbrella of a single molecular scaffold could bring interesting biological properties, herein we present synthesis, characterization, with two crystal structures reported, and biological evaluation of some tyramine derivates. Cytotoxic and antimigratory potential was addressed by using a colorectal cancer cell line as a model system. Although possessing no cytotoxic effects, two compounds have shown strong antimigratory potential in low doses, with no effect on healthy MRC-5 cells. Evaluation of their antimicrobial activities suggested prominent antimicrobial activity, where Compound 4 outperformed streptomycin against Escherichia coli and Proteus mirabilis. Hormone-dependent types of cancer, such as prostate, ovary, and breast, are highly dependent on human sex hormone-binding globulin (SHBG) blood levels. A molecular docking study has shown that 1 has high affinity to bind and therefore compete with natural steroids for the SHBG steroid-binding site. DNA-binding study have shown that 4 interacts with CT-DNA in a groove-binding mode. In silico ADME/T study revealed that all compounds have suitable physicochemical properties for oral bioavailability and druglikeness, while toxicity tests for 1, 4, and 6 suggested potential for mutagenicity (4, 6), hepatotoxicity (6), and skin sensation (1).

Structure of 2,3,5-tri-phenyl-tetra-zol-3-ium chloride hemi-penta-hydrate.

The title hydrated mol-ecular salt, C19H15N4 +·Cl-·2.5H2O, has two tri-phenyl-tetra-zolium cations, two chloride anions and five water mol-ecules in the asymmetric unit. The cations differ in the conformations of the phenyl rings with respect to the heterocyclic core, most notably for the C-bonded phenyl ring, for which the N-C-C-C torsion angles differ by 36.4 (3)°. This is likely a result of one cation accepting an O-H⋯N hydrogen bond from a water mol-ecule [O⋯N = 3.1605 (15) Å], while the other cation accepts no hydrogen bonds. In the extended structure, the water mol-ecules are involved in centrosymmetric (H2O)2Cl2 rings as well as (H2O)4 chains. An unusual O-H⋯π inter-action and weak C-H⋯O and C-H⋯Cl hydrogen bonds are also observed.

First Alliance of Pyrazole and Furoxan Leading to High-Performance Energetic Materials.

Nitrogen heterocyclic scaffolds retain their leading position as valuable building blocks in material science, particularly for the design of small-molecule energetic materials. However, the search for more balanced combinations of directly linked heterocyclic cores is far from being exhausted and aims to reach ideally balanced high-energy substances. Herein, we present the synthetic route to novel pyrazole-furoxan framework enriched with nitro groups and demonstrate a promising set of properties, viz., good thermal stability, acceptable mechanical sensitivity, and high detonation performance. In-depth crystal analysis showed that the isomers having lower-impact sensitivity values in both types of regioisomeric pairs are those with the exocyclic furoxan oxygen atom being closer to the pyrazole ring. Owing to the favorable combination of high crystal densities (1.83-1.93 g cm-3), positive oxygen balance to CO (up to +13.9%), and high enthalpies of formation (322-435 kJ mol-1), the synthesized compounds show high calculated detonation velocities (8.4-9.1 km s-1) and excellent metal accelerating abilities. The incorporation of the 3-nitrofuroxan moiety increases the thermal stability (by ca. 20 °C) and decreases the mechanical sensitivity of target hybrid materials in both types of regioisomeric pairs. Simultaneously, the detonation performance of 3-nitrofuroxans is almost identical to that of 4-nitrofuroxans, highlighting the potential of the regioisomeric tunability in the future design of energetic materials.

Synthesis, electrochemical properties, and antioxidant activity of sterically hindered catechols with 1,3,4-oxadiazole, 1,2,4-triazole, thiazole or pyridine fragments.

A series of new RS-, RS-CH2- and R2N-CH2-functionalized сatechols with heterocyclic fragments such as 1,3,4-oxadiazole, 1,2,4-triazole, thiazole, or pyridine were synthesized by the reaction of 3,5-di-tert-butyl-o-benzoquinone or 3,5-di-tert-butyl-6-methoxymethylcatechol with different heterocyclic thiols. The S-functionalized catechols were prepared by the Michael reaction from 3,5-di-tert-butyl-o-benzoquinone and the corresponding thiols. The starting reagents such as substituted 1,3,4-oxadiazole-2-thiols and 4H-triazole-3-thiols are characterized by thiol-thione tautomerism, therefore their reactions with 3,5-di-tert-butyl-6-methoxymethylcatechol can proceed at the sulfur or nitrogen atom. In the case of mercapto-derivatives of thiazole or pyridine, this process leads to the formation of the corresponding thioethers with a methylene linker. At the same time, thiolated 1,3,4-oxadiazole or 1,2,4-triazole undergo alkylation at the nitrogen atom in the reaction with 3,5-di-tert-butyl-6-methoxymethylcatechol to form the corresponding thiones. The yield of reaction products ranges from 42 to 80%. The crystal structures of catechols with 3-nitropyridine or 1,3,4-oxadiazole-2(3H)-thione moieties were established by single-crystal X-ray analysis. The possibility of forming intra- and intermolecular hydrogen bonds has been established for these compounds. The electrochemical behavior of the studied compounds is influenced by several factors: the nature of the heterocycle and its substituents, the presence of a sulfur atom in the catechol ring, or a thione group in the heterocyclic core. The radical scavenging activity and antioxidant properties were determined using the reaction with synthetic radicals, the cupric reducing antioxidant capacity assay, the inhibition process of superoxide radical anion formation by xanthine oxidase, and the process of lipid peroxidation of rat liver (Wistar) homogenates in vitro.

Synthesis, characterization, density functional theory (DFT) analysis, and mesomorphic study of new thiazole derivatives

This study focuses on synthesizing and characterizing a new series of organic compounds with a heterocyclic core based on sulfur (thiazole). These compounds, labeled as N-(4-(4-alkoxyphenyl) thiazol-2-yl)-1-(naphthalen-2-yl) methanimine (ATNM)n, incorporate alkoxy chains of varying lengths (CnH2n+1O, n = 2, 3, 4, 5, 6, 7, 8, 9, 10, and 12) through a multi-step process. Structural analysis using FT-IR, 1H-NMR, and 13C-NMR confirmed the composition of these compounds. Theoretical calculations using density functional theory (DFT) were carried out with the B3LYP 6-311G (d,p) basis set for the entire set of synthesized compounds (ATNM)n. The (Gaussian 9) software was employed to compute optimized geometrical structures of the proposed compounds in the gas phase. However, investigations into their phase behavior using polarizing optical microscopy (POM) and differential scanning calorimetry (DSC) revealed that none of the compounds in this series exhibited the typical mesomorphic characteristics of liquid crystals. Comparisons were made between theoretical predictions from DFT and observed data obtained through synthesized compounds study. The results revealed that the presence of terminal alkoxy significantly influenced the overall energy of potential geometric structures, along with their physical and thermal characteristics. KEY WORDS: Heterocyclic compounds, Thiazole, Liquid crystals, DFT, Methanimine Bull. Chem. Soc. Ethiop. 2024, 38(6), 1827-1842. DOI: https://dx.doi.org/10.4314/bcse.v38i6.25

Skeletal Reorganization: Approaches towards the Synthesis of Aza-Heterocyclic Cores

AbstractThe impetuous development of the pharmaceutical industry and material science stimulates the search for new synthetic approaches and new methods for the synthesis and functionalization of aza-heterocycles; these are some of the key objectives of modern organic chemistry. As a result, an advanced method towards the synthesis of functionalized N-heterocycles that circumvents the limitations associated with traditional methods needs to be devised. In recent decades, rearrangement/reorganization reactions have emerged as a powerful tool for the efficient synthesis of the aza-heterocycle. In this illustration, we summarize some our recent efforts in the development of few complex aza-heterocyclic cores.1 Introduction2 Skeletal Rearrangement of Small Heterocycles via Domino Ring-Opening and Ring-Closing (DROC) Strategy3 Ru(II)-Catalyzed Skeletal Rearrangement of the Quinazoline Ring4 Lewis Acid Catalyzed Skeletal Rearrangement of Furans to Indolizine Cores5 Skeletal Rearrangement of Donor–Acceptor Cyclopropanes via Domino Ring-Opening and Ring-Closing (DROC) Strategy6 Lewis Acid Mediated Skeletal Rearrangement of Donor–Acceptor Spirocyclopropylpyrazolones7 Skeletal Rearrangement through Ring Distortion Strategy8 Conclusion

A non-symmetric room-temperature tristriazolotriazine liquid crystal

Tristriazolotriazine (TTT) has emerged as an easily accessible electron-deficient heterocyclic core for discotic liquid crystals (LCs). Materials that are liquid-crystalline at room temperature, i.e., do not crystallize in ambient conditions, are of particular interest when the LC state is prone to offer advantages in optoelectronic devices, e.g., for anisotropic charge or exciton transport, or anisotropic light emission. However, there has been no report of non-symmetric TTT LCs, i.e., with unequal arms. Here, we report two non-symmetric compounds derived from the TTT core. Their non-symmetry, combined with a high number of peripheral alkyl chains, is found to promote Colh mesomorphism over a broad temperature range including room temperature. The non-symmetry also induces an increase in the emission quantum yield, compared to symmetric analogs.

Oxidation of NOBINs Toward α-Spiropyrrolidones.

While the oxidation of phenols and BINOLs is well documented to lead to a broad range of useful organic scaffolds, that of NOBINs is far less explored. We investigate herein their oxidation with a number of standard chemical oxidants, leading upon skeletal rearrangement to the corresponding α-spiropyrrolidones, which represent a rare and highly valuable heterocyclic core.

1-(Dicyanomethylene)-3-hydroxy-1H-indene-2-carboxylic Acid

Bulk heterojunction solar cells are among the most promising organic solar cells (OSCs). One of the two important parts of OSCs are acceptors, and the development of the design and synthesis of non-fullerene acceptors involves an electron-deficient heterocyclic central core and anchor acceptor malonitrile derivatives of 3-methylene-2,3-dihydro-1H-inden-1-ones. In this communication, an intermediate for the synthesis of this compound, 1-(dicyanomethylene)-3-hydroxy-1H-indene-2-carboxylic acid, was prepared by the Perkin reaction of 2-(3-oxoisobenzofuran-1(3H)-ylidene)malononitrile with tert-butyl acetoacetate in the presence of acetic anhydride and triethylamine. The structure of the newly synthesized compound was established by means of elemental analysis, high-resolution mass spectrometry, 1H NMR, 13C NMR and IR spectroscopy, and mass spectrometry.

Design and Efficient Synthesis of New 4-Amino-Substituted 2-(4-Bromobenzyl)-5,6,7,8-tetrahydrobenzo[4,5]thieno[2,3-d]pyrimidines of Anticancer Interest and Their In Silico Study

AbstractThienopyrimidines are an emerging class of fused pyrimidines due to their broad spectrum of pharmacological properties, including antimicrobial, anti-inflammatory, antimalarial, anticancer, etc. The anticancer activity of these compounds has been mechanistically proven via the inhibition of validated drug targets, such as EGFR, VEGFR-2, PI3K, and c-kit. In this research article, we designed and synthesized new 4-amino-substituted 2-(4-bromobenzyl)-5,6,7,8-tetrahydrobenzo[4,5]thieno[2,3-d]pyrimidines to explore their anticancer potential. These heterocycles were designed based on pharmacophoric features of the core heterocycle, varying its C4 substitution with a variety of amines and considering cancer protein-ligand interactions with the aim to obtain potent lead molecules. The target compound-protein interaction complexes were analyzed, and lead compounds were identified based on their better binding affinity in molecular docking studies.

UV Light-Driven Nitric Oxide Release from Porous Nitrogen Heterocyclic Polymers.

In this study, porous polymers with nitrogen heterocyclic core structures are synthesized through the condensation of enaminonitrile and terephthalaldehyde monomers. These polymers are used as a platform to store bioactive nitric oxide (NO) and control its release. NO loading is achieved by nitrosating the polymers with acidified nitrite, a process that also imparts photoresponsivity to the polymers. Polymer composition and porosity affect NO storage and release. It is observed that under UV light at 365nm in a PBS solution, the polymers (NO@DHP-POP) can release NO in a manner fully controlled by UV lighting. Under experimental conditions, these porous polymers release NO at a rate of ≈10.0-50.0µmol g-1 over 60 min. These findings demonstrate the potential of these polymers for integrating NO delivery into phototherapy applications.

Synthesis and photophysical properties of pyrazolo[1,5-a]pyrimidines containing D−π−A Architecture similar to Prodan

A new family of four dyes 3-acyl-7-dialkylaminopyrazolo[1,5-a]pyrimidines-based with D−π−A molecular architecture, similar to Prodan, was synthesized in up to 50 % of global yield using a microwave-assisted five-step synthesis route, cheap reagents, and scalable procedures. Next, the photophysical properties of these dyes were studied and compared to those of Prodan, revealing that the 3-acetyl-7-(pyrrolidin-1-yl) derivative exhibits superior properties than the other three dyes. Moreover, a negative solvatofluorochromism behavior was observed in all dyes, attributed to a higher dipole moment in the ground state caused by an intramolecular charge transfer (ICT) from a dialkylamino to an acyl group, with the heterocyclic core acting as a modulable π-linker.

Transient radical species and oxygen colorimetric indicators grounded on phenothiazinium dyes

This study investigates four phenothiazinium dyes including methylene blue (MB) and three analogues containing auxochrome variation 2–4 as oxygen colorimetric indicators prepared by their incorporation into two types of oxygen permeable materials containing: a) polyvinyl alcohol substrate with additional TiO2 photocatalysts (PhOxIn), and b) carboxymethylcellulose polymer matrix containing glucose and KOH (ChOxIn). In vacuum packages where volumetric concentrations of oxygen were below 0.01 %, the leuco forms of the tested phenothiazinum dyes were readily oxidised, initiating the colour turn from white to blue. The redox processes involved were explored by experimental electron paramagnetic resonance EPR and UV–vis spectroscopic methods and further supported by theoretical quantum chemistry. The EPR experiments showed that the chemical oxidation of the leuco-form of the phenothiazinium dyes 1–4 produced transient aminyl radical species with the single electron mainly located at the nitrogen atom of the heterocyclic core. The formation of these transient aminyl species was also perceived by UV–vis spectroscopy, their absorption maxima situated in the 552–592 nm range being also supported by TD-DFT theoretical calculations.

A New Bioactive Thiazolidinone-based Azo Dye for Naked-eye Colorimetric Detection of Cyanide Ions

Abstract: A new bioactive azo dye embedding a thiazolidinone heterocyclic core was designed and synthesized for antibacterial application and colorimetric sensing of cyanide ion (CNˉ) in organic solutions. The structure of the prepared dye was elucidated from its 1H NMR, FT-IR and UV-Vis spectral data. It proved to be a fast and sensitive colorogenic sensor for detection of CNˉ. Spectroscopic studies were carried out to investigate the effect of different CNˉ concentrations on the detection efficiency. Moreover, the studies revealed no significant competition or influence of other anions on the sensitivity of CNˉ detection by the synthesized dye. A Job's plot indicated a 1:1 stoichiometry of the dye and CNˉ in their colorful complex. Further development of the method for naked-eye detection of CNˉ in low-concentration aqueous solutions was achieved by using the cellulose papers painted with the dye. The as-prepared testing paper allowed CNˉ sensing in concentrations as low as 2 μM. Evaluation of the dye for antibacterial activities using the well diffusion technique displayed that its inhibitory activity is at least as good as and in some cases superior to ampicillin against the bacterial strains employed in the zone assay. In response to CN¯, the dye changes color from yellow to reddish brown which accounts for its significant interactions with CNˉ and affords a naked-eye sensing method without resorting to any spectroscopic instrumentation.

New oxadiazol‐5‐ones derivatives and their performance as angiotensin‐converting enzyme (ACE) inhibitors

AbstractAngiotensin‐converting enzyme inhibitors are widely used in treating arterial hypertension, acting on the renin‐angiotensin‐aldosterone system and controlling blood pressure. We present a novel, greener, and faster methodology to assess the 1,2,4‐oxadiazol‐5‐one ring and perform molecular modifications to obtain angiotensin‐converting enzyme (ACE) inhibitors using this heterocyclic core. Molecular docking simulations indicate that the tested compounds exhibited an affinity for the ACE binding site, with scores comparable to the commercial inhibitor lisinopril. However, in vitro assays revealed that the compounds were ineffective in inhibiting ACE activity. The lack of inhibition may be related to the compounds' more apolar nature. These results emphasize the importance of integrating computational and experimental approaches in developing new drugs, providing valuable insights for planning future studies to optimize the activity of synthesized compounds.