Specific Habitat Research Articles

Dispersal limitation and environmental filtering effects: The taxonomic and functional beta diversity of ground beetles along the altitudinal gradient in Chinese warm-temperature forests.

Beta diversity patterns along environmental gradients and underlying mechanisms constitute key research inquiries in biogeography. However, ecological processes often also influence the functional traits of biological communities, making the assessment of functional β-diversity crucial. Ground beetles (Coleoptera: Carabidae) are one of the most species-rich groups in the insect community, displaying strong habitat specificity and morphological differences. In this study, we explored the patterns of taxonomic and functional beta diversity in ground beetle communities along the altitudinal gradient of warm-temperature forests. By partitioning beta diversity into turnover and nestedness components, we evaluated their relationship with spatial distance. Our findings indicate a decline in species and functional trait similarity with increasing elevation and geographic distance. Further analysis attributed both types of beta diversity in carabids to a combination of dispersal limitation and environmental filtering, with elevation and geographic distance emerging as significant factors. Interestingly, forest-type variations were found to have no impact on the beta diversity of these communities. Our study reveals the impact of environmental filtering and dispersal limitation on both taxonomic and functional beta-diversity, shedding light on carabid community assembly in localized warm-temperature forest areas in eastern China.

Assessment of rarity and ecological preferences of the non-marine ostracods (Crustacea) in Çanakkale Province (Türkiye)

Rarity as a multidimensional concept has not been discussed for the ostracods along with the effects of physicochemical factors and sedimentation rates of waters on their distribution. We randomly sampled 91 aquatic sites including eight habitat types in the Çanakkale Province to study ostracod species rarity, commonness, and ecological preferences, and to test the relationships between the rarity index (average of geographic range, habitat specificity, and population size indices) and environmental factors. A total of 44 ostracod taxa (25 living) were reported from 75 sites. Among the species, Candonocypris caledonica was recorded for the first time in Türkiye. Sixty percent of 25 living species exhibited cosmopolitan characteristics, making significant contributions to the diversity of ostracods. The well-known cosmopolitan species, Heterocypris salina (rr = 0.268), Cypridopsis vidua (rr = 0.289), Limnocythere inopinata (rr = 0.330), Ilyocypris bradyi (rr = 0.370), and Psychrodromus olivaceus (rr = 0.390), were identified as common species based on the rarity index (rr) values. Of the environmental variables, only sediment grain sizes (×2000, ×500, and ×63 μm) were found to be effective on the distribution of ostracod species. The Shannon index exhibited a positively significant association with ×2000, while the population size index displayed a linear relationship with ×63 μm grain size, indicating a small population size and rarity. Associations among index values, sediment grain size, and water quality variables showed that comprehensive studies on ostracods, analyzing both water and sediment, can provide a clearer and more precise information for evaluating the rarity and ecological preferences of species.

Year-round carryover effects are driven by migration phenology for Hirundo rustica (Barn Swallow) wintering in West Africa

Abstract Recently, population declines have been reported for many migratory birds. Because of complex life cycles, determining the causes for such declines is often difficult. Thus, migratory birds are of special conservation interest. We studied the migratory behavior of Hirundo rustica (Barn Swallow) tagged with solar geolocators and determined carryover effects during the entire annual cycle from one breeding season to the next. We used a partial least squares path model (PLS-PM) to disentangle migratory and breeding events that occur in chronological order. In addition, we controlled for broad environmental conditions in the wintering grounds (NDVI and latitude) and the specific molting habitat (δ13C). We did not find a carryover effect from reproduction investment in the attachment year to breeding success in the subsequent year. Individuals that invested more in reproduction departed earlier from the breeding colonies, but this in turn did not affect the onset of autumn migration. Thus, the premigratory period should be acting as a buffer stage counteracting any previous carryover effects from reproduction investment. On the other hand, we found a long-lasting domino effect from the onset of autumn migration to subsequent breeding success, consistent with the notion of a migratory race. Specifically, individuals which started earlier in the autumn migration arrived earlier to the wintering grounds, started earlier in the spring migration arrived earlier to the breeding colonies, and had a higher breeding success. We highlight that the premigratory period (i.e., the time elapsed between departure from breeding areas and the onset of autumn migration) should be important for the life cycle of migratory species, but it has been frequently overlooked.

The adaptive value of density-dependent habitat specialization and social network centrality

Density dependence is a fundamental ecological process. In particular, animal habitat selection and social behavior often affect fitness in a density-dependent manner. The Ideal Free Distribution (IFD) and niche variation hypothesis (NVH) present distinct predictions associated with Optimal Foraging Theory about how the effect of habitat selection on fitness varies with population density. Using caribou (Rangifer tarandus) in Canada as a model system, we test competing hypotheses about how habitat specialization, social behavior, and annual reproductive success (co)vary across a population density gradient. Within a behavioral reaction norm framework, we estimate repeatability, behavioral plasticity, and covariance among social behavior and habitat selection to investigate the adaptive value of sociality and habitat selection. In support of NVH, but not the IFD, we find that at high density habitat specialists had higher annual reproductive success than generalists, but were also less social than generalists, suggesting the possibility that specialists were less social to avoid competition. Our study supports niche variation as a mechanism for density-dependent habitat specialization.

Species-specific dynamics may cause deviations from general biogeographical predictions - evidence from a population genomics study of a New Guinean endemic passerine bird family (Melampittidae).

The family Melampittidae is endemic to New Guinea and consists of two monotypic genera: Melampitta lugubris (Lesser Melampitta) and Megalampitta gigantea (Greater Melampitta). Both Melampitta species have scattered and disconnected distributions across New Guinea in the central mountain range and in some of the outlying ranges. While M. lugubris is common and found in most montane regions of the island, M. gigantaea is elusive and known from only six localities in isolated pockets on New Guinea with very specific habitats of limestone and sinkholes. In this project, we apply museomics to determine the population structure and demographic history of these two species. We re-sequenced the genomes of all seven known M. gigantaea samples housed in museum collections as well as 24 M. lugubris samples from across its distribution. By comparing population structure between the two species, we investigate to what extent habitat dependence, such as in M. gigantaea, may affect population connectivity. Phylogenetic and population genomic analyses, as well as acoustic variation revealed that M. gigantaea consists of a single population in contrast to M. lugubris that shows much stronger population structure across the island. We suggest a recent collapse of M. gigantaea into its fragmented habitats as an explanation to its unexpected low diversity and lack of population structure. The deep genetic divergences between the M. lugubris populations on the Vogelkop region, in the western central range and the eastern central range, respectively, suggests that these three populations should be elevated to full species level. This work sheds new light on the mechanisms that have shaped the intriguing distribution of the two species within this family and is a prime example of the importance of museum collections for genomic studies of poorly known and rare species.

Ecological and evolutionary processes involved in shaping microbial habitat generalists and specialists in urban park ecosystems.

Urban parks, as an important urban greenspace, play essential roles in ecosystem services and are important hotspots for microbes. Microbial diversity is driven by different ecological and evolutionary processes, while little is currently known about the distinct roles of ecological and evolutionary features in shaping microbial diversity in urban park ecosystems. We explored the ecological and evolutionary characteristics of prokaryotic and microeukaryotic habitat generalists and specialists in urban park ecosystems based on a representative set of different habitats. We found that different ecological and evolutionary drivers jointly maintained and regulated microbial diversity in urban park microbiomes through analyzing the community assembly process, ecological roles in hierarchical interaction, and species diversification potential. These findings significantly advance our understanding regarding the mechanisms governing microbial diversity in urban park ecosystems.

Evolution of rarity and phylogeny determine above- and belowground biomass in plant-plant interactions.

Rare species are often considered inferior competitors due to occupancy of small ranges, specific habitats, and small local populations. However, the phylogenetic relatedness and rarity level (level 1-7 and common) of interacting species in plant-plant interactions are not often considered when predicting the response of rare plants in a biotic context. We used a common garden of 25 species of Tasmanian Eucalyptus, to differentiate non-additive patterns in the biomass of rare versus common species when grown in mixtures varying in phylogenetic relatedness and rarity. We demonstrate that rare species maintain progressively positive non-additive responses in biomass when interacting with phylogenetically intermediate, less rare and common species. This trend is not reflected in common species that out-performed in monocultures compared to mixtures. These results offer predictability as to how rare species' productivity will respond within various plant-plant interactions. However, species-specific interactions, such as those involving E. globulus, yielded a 97% increase in biomass compared to other species-specific interaction outcomes. These results are important because they suggest that plant rarity may also be shaped by biotic interactions, in addition to the known environmental and population factors normally used to describe rarity. Rare species may utilize potentially facilitative interactions with phylogenetically intermediate and common species to escape the effects of limiting similarity. Biotically mediated increases in rare plant biomass may have subsequent effects on the competitive ability and geographic occurrence of rare species, allowing rare species to persist at low abundance across plant communities. Through the consideration of species rarity and evolutionary history, we can more accurately predict plant-plant interaction dynamics to preserve unique ecosystem functions and fundamentally challenge what it means to be "rare".

Landscape matrix and substrate jointly shape the trait composition of true bug (Heteroptera) communities in drainage ditches

Drainage ditches play a key role in the conservation of fragmented landscapes by providing refuge sites and secondary habitats for many terrestrial and aquatic organisms across various taxa. Species richness of ditches can exceed that of adjacent natural habitats, but here, we looked further and assessed the role of drainage ditches in shaping the community structure of true bugs aiming to better estimate ditches’ conservation value from the point of their species and trait composition. We tested the effects of the ditch substrate (saline, sandy or fen), landscape matrix (agrarian or grassland) and vegetation (species richness of all plants and invasive plants, and abundance of woody plants) on the true bug communities of 60 drainage ditches in the lowland of East-Central Europe. We found that substrate and landscape matrix contributed the most in determining true bug communities. Based on species composition, different substrates and landscape matrix types had distinct communities, but the trait composition showed differentiation according to the landscape matrix in saline habitats only. The trait composition in true bug communities was more diverse in grassland ditches than in agrarian ones, which hosted more habitat generalists associated with invasive vegetation. We concluded that a pronounced gradient in habitat stress, originating in substrate salinity and aridity, causes the differentiation of the true bug communities based on their trait composition. Additionally, intense habitat stress increases the number of habitat specialists and the conservation value of a drainage ditch.

Crop type rather than production method determines functional trait composition of insect communities on arable land in boreal agricultural landscapes

Abstract To understand the potential consequences of arable land use changes for insect conservation and ecosystem functioning, it is fundamental to know how insect species with different functional traits respond to crop choice and production method. This study examined the effects of crop type and production method on functional traits of butterfly, bumblebee and carabid beetle communities using species abundance data from 78 fields in Southern Finland. Surrounding landscape composition was also accounted for. The studied traits were associated with dispersal capacity, habitat or diet specialization and phenology—the key determinants modifying species responses to agricultural disturbances and land use changes. Butterfly habitat breadth was narrowest and wingspan shortest in long‐term fallows. Fallows also supported the highest share of butterflies overwintering in early development stages and bumblebees with late‐emerging queens. The tongue length of bumblebees was longest in organic oat fields, probably due to flowering weeds with long corolla. For carabid beetles, the proportion of poor flyers and carnivores was highest in perennial crops and fallows. Carabid beetles overwintering as adults were relatively more abundant in organic than in conventional production, probably due to more intensive tillage in organic fields. In all insect groups, poor dispersers and/or specialists decreased with increasing arable land cover in the surrounding landscape. Increasing the area of long‐term fallows and perennial crops and enhancing within‐field plant diversity while maintaining landscape heterogeneity would promote insect species sensitive to agricultural disturbances and land use changes and their associated ecosystem services in boreal farmland.

Discovery of the Larvae and Pupae of the Black Fly Simulium (Gomphostilbia) khelangense and Breeding Habitats of Potential Pest Species of the S. (G.) chumpornense Subgroup (Simuliidae).

Two species of black flies (Simuliidae) in Thailand, Simulium chumpornense Takaoka and Kuvangkadilok, 2000, and S. khelangense Takaoka, Srisuka & Saeung, 2022, are potent vectors of avian blood protozoa of the genera Leucocytozoon and Trypanosoma and are pests of domestic avian species. Although the adults are abundant throughout Thailand, information on their breeding habitats is limited, and the immature stages of S. khelangense are unknown. We collected the larvae and pupae of S. khelangense from the Mekong River, the first-ever record of Simuliidae from this large continental river. Mitochondrial cytochrome c oxidase I and internal transcribed spacer 2 were used to associate the larvae and pupae with known adults. Both genetic markers strongly supported their identity as S. khelangense. The larvae and pupa of S. khelangense are described. The pupal gill filaments, larval abdominal protuberances, and setae distinguish this species from other members of the S. varicorne species group. The immature stages of S. chumpornense inhabit a wide variety of flowing waters, from small streams (3 m wide) to enormous continental rivers (400 m wide); thus, S. chumpornense is a habitat generalist. In contrast, S. khelangense was found only in the large Mekong River and is, therefore, a habitat specialist. Both species can exploit their principal habitats and produce abundant adult populations.

The last of the maculineans: can we save the emblematic Alcon Blue butterfly Phengaris alcon under climate change when its habitat continues to deteriorate?

In the NW-European region of Flanders (northern Belgium), wet heathlands harbour several threatened species among which the emblematic Alcon Blue butterfly Phengaris alcon is rapidly declining. Since 1990, the number of occupied grid cells in Flanders has decreased from 61 to only six in 2023, a decline of 90%. Due to the loss of many populations, the mean distance between populations tripled from 9 km in the period 1950–1990 to 27 km now. Site-wide egg counts in one of the strongholds of the Alcon Blue in Flanders revealed a strong increase after some initial intensive care conservation measures in the 2000s, but since 2013 a steep decline of 99% has been observed. The standardised egg counts in the remaining six Flemish populations (i.e., monitoring within the framework of the Natura2000 reporting) showed a yearly decrease of 18% since 2016. Despite increased conservation attention and targeted management since the end of the 1990s, the current situation of P. alcon in Belgium is more precarious than ever. Causes of this rapid decline are manifold and they are likely to be amplified by extreme weather conditions caused by climate change. More efficient intensive care measures and more intense cooperation across national borders are now quickly required to regionally preserve this habitat specialist with a unique eco-evolutionary profile.Implications for insect conservation By analysing the causes of the decline of the threatened Alcon Blue butterfly in Flanders, we suggest management and policy measures in an attempt to conserve this and other threatened heathland species in a highly anthropogenic region.

The Effects of Wetland Degradation on Ecological Species

Wetlands are vital ecosystems that provide numerous ecological services, including flood control, water filtration, carbon sequestration, and habitat for diverse flora and fauna. However, human activities such as urbanization, agriculture, and infrastructure development have led to widespread wetland degradation worldwide. Wetland ecosystems diminished by 21-35% between 1700 and 2020 as a result of human interference, with at least 1.3 million square miles of wetlands lost globally—an area about the size of Alaska, Texas, California, Montana, New Mexico, and Arizona combined. This research used a documented methodology for extracting information from different books, conversations, conferences, and international organizations to understand the effects of wetland degradation on the decline of species and strategies for wetland conservation and restoration. This paper aims to elucidate the multifaceted effects of wetland degradation on ecological species. The results indicate that wetland degradation declines water quality, leading to alterations in water flow patterns, decreased groundwater recharge, and increased flooding downstream. This can result in the loss of biodiversity, as many species depend on specific water levels and habitats within wetlands. Moreover, the loss of wetlands diminishes their volume to store carbon, contributing to greenhouse gas emissions and exacerbating climate change. Furthermore, wetland degradation compromises water quality by reducing the natural filtration and purification functions of wetlands. Contaminants from agricultural runoff, industrial discharge, and urban pollution accumulate in degraded wetlands, posing risks to human health and aquatic ecosystems. Additionally, the loss of wetlands exacerbates erosion and sedimentation, leading to habitat destruction and loss of coastal resilience against storms and sealevel rise. Addressing wetland degradation requires a multifaceted approach, including policy interventions, restoration efforts, and public awareness campaigns. Effective wetland conservation strategies involve the preservation of existing wetlands, restoration of degraded ones, and sustainable management practices to mitigate further degradation. Collaborative efforts between governments, NGOs, local communities, and stakeholders are essential to safeguarding these critical ecosystems and the invaluable services they provide to the environment and society.

Environmental specificity of karst cave habitats evidenced by diverse symbiotic bacteria in Opiliones

BackgroundKarst caves serve as natural laboratories, providing organisms with extreme and constant conditions that promote isolation, resulting in a genetic relationship and living environment that is significantly different from those outside the cave. However, research on cave creatures, especially Opiliones, remains scarce, with most studies focused on water, soil, and cave sediments.ResultsThe structure of symbiotic bacteria in different caves were compared, revealing significant differences. Based on the alpha and beta diversity, symbiotic bacteria abundance and diversity in the cave were similar, but the structure of symbiotic bacteria differed inside and outside the cave. Microorganisms in the cave play an important role in material cycling and energy flow, particularly in the nitrogen cycle. Although microbial diversity varies inside and outside the cave, Opiliones in Beijing caves and Hainan Island exhibited a strong similarity, indicating that the two environments share commonalities.ConclusionsThe karst cave environment possesses high microbial diversity and there are noticeable differences among different caves. Different habitats lead to significant differences in the symbiotic bacteria in Opiliones inside and outside the cave, and cave microorganisms have made efforts to adapt to extreme environments. The similarity in symbiotic bacteria community structure suggests a potential similarity in host environments, providing an explanation for the appearance of Sinonychia martensi in caves in the north.

A conservation assessment of birds in the Karoo region of South Africa: densities, populations, ranges, and trend estimates

The Karoo region of South Africa, which includes the Succulent and Nama Karoo biomes, supports a unique avian fauna, with ten bird species occurring exclusively in this arid-zone region and many others exhibiting a strong preference for this habitat. To better determine the conservation status of these birds, we conducted point counts to estimate population densities of bird species occurring in the South African Karoo region in 2017 and 2018. We also used data of the South African Bird Atlas Projects (SABAP2) to estimate the species’ ranges and to determine population trends. Although the population densities are naturally low for most species, their ranges are very large, and reporting-rate trends appear stable for most species. Our analysis reveals that none of the Karoo bird species are currently of serious conservation concern. However, the Red Lark Calendulauda burra and Sclater’s Lark Spizocorys sclateri should be considered regionally Near Threatened as they are habitat specialists with inferred declining populations and are not currently protected within any designated conservation areas. Given the rapid transformation of landscapes linked to mining and alternative energy developments currently underway in the Karoo, combined with the poor representation of bird species in protected areas, it is imperative that special attention be paid to the conservation of bird species endemic to the Karoo, and that appropriate mitigation measures be taken by developers.

Advertisement call variation is related to environmental and geographic distances in two anuran species inhabiting highland forests in northeastern Brazil

AbstractHighlands are of paramount importance to the study of evolution as they are frequently implicated in historical and ecological processes that generate and maintain biological diversity. In northeastern Brazil, sparse rainforest remnants located in highlands north of the São Francisco River are surrounded by the dry and open landscape of the Caatinga biome. Earlier studies suggested that these forests were historical refuges to the rainforest fauna and flora during Pleistocene's climatic cycles. However, it is still unclear whether populations in distinct highlands experienced phenotypic differentiation as a result of adaptation to environmental conditions of each forest remnant. Herein, we used two frog species widely distributed and ecologically different, Dendropsophus oliveirai, a habitat specialist, and Physalaemus cuvieri, a habitat generalist, to investigate the relationships between environmental variation, geographic, genetic, and body size distance with advertisement call variation among populations inhabiting different highlands. Our results indicated that acoustic variation among P. cuvieri populations is strongly influenced by environmental variation, but also by the geographic distance among populations. In D. oliveirai, environment is also the most influent factor on acoustic variation, followed by a lower influence of genetic and morphological variation. Associations between environmental and geographic factors suggest indirect effects of geographic distance on acoustic variation in both species through an environmental gradient. We believe that selective processes and isolation by distance possibly act together in driving interpopulational acoustic variation with habitat‐specific species being more affected by geographic isolation in suitable habitats.Abstract in Portuguese is available with online material.

A family of process-based models to simulate landscape use by multiple taxa

ContextLand-use change is a key driver of biodiversity loss. Models that accurately predict how biodiversity might be affected by land-use changes are urgently needed, to help avoid further negative impacts and inform landscape-scale restoration projects. To be effective, such models must balance model realism with computational tractability and must represent the different habitat and connectivity requirements of multiple species.ObjectivesWe explored the extent to which process-based modelling might fulfil this role, examining feasibility for different taxa and potential for informing real-world decision-making.MethodsWe developed a family of process-based models (*4pop) that simulate landscape use by birds, bats, reptiles and amphibians, derived from the well-established poll4pop model (designed to simulate bee populations). Given landcover data, the models predict spatially-explicit relative abundance by simulating optimal home-range foraging, reproduction, dispersal of offspring and mortality. The models were co-developed by researchers, conservation NGOs and volunteer surveyors, parameterised using literature data and expert opinion, and validated against observational datasets collected across Great Britain.ResultsThe models were able to simulate habitat specialists, generalists, and species requiring access to multiple habitats for different types of resources (e.g. breeding vs foraging). We identified model refinements required for some taxa and considerations for modelling further species/groups.ConclusionsWe suggest process-based models that integrate multiple forms of knowledge can assist biodiversity-inclusive decision-making by predicting habitat use throughout the year, expanding the range of species that can be modelled, and enabling decision-makers to better account for landscape context and habitat configuration effects on population persistence.

Trophic position determines the persistence of neotropical understory birds after forest disturbance.

Habitat loss and degradation are key drivers of the current biodiversity crisis. Most research focuses on the question of which traits allow species to persist in degraded habitats. We asked whether a species' trophic position or niche width influences the resilience of species in degraded habitats and to what extent habitat degradation affects trophic interactions between species. We used nitrogen isotope ratios (15N:14N, expressed as δ15N value) to quantify and compare trophic positions and niche widths of understory birds inhabiting old-growth and young secondary forests in the Pacific lowlands of Costa Rica. We found that a species' trophic position rather than its trophic niche width determined its persistence in secondary forests. Species feeding at lower trophic levels in old-growth forests were less likely to persist in secondary forests than those occupying a higher trophic position in old-growth forests. This pattern is likely induced by the occurrence of relatively large-bodied habitat specialists with a flexible and high-trophic level diet in secondary forests. These habitat specialists likely caused generalist bird species to lower their trophic position relative to conspecifics in old-growth forests. Regarding trophic niche widths, species in secondary forests tend to have larger niche widths than old-growth forest species. However, as old-growth forest specialists and generalists did not differ in their niche widths, no systematic effect of trophic niche width on species persistence after forest disturbance was found. This is the first study that shows a systematic effect of trophic position on the persistence of a wide range of bird species in a disturbed forest ecosystem. It therefore provides important insights into species' responses to habitat degradation and the conservation value of secondary forests. To improve habitat quality for old-growth forest birds and facilitate avian seed dispersal, the creation of large contiguous forest patches should be prioritised when implementing reforestation measures.

Overcoming the lack of distribution data for range‐restricted habitat specialist frogs

AbstractWith over 40% of species threatened with extinction, the distributional range of most amphibians is still unknown, generating uncertainty whether species are naturally rare, under‐sampled, or difficult to detect. We implemented a modelling approach that uses bromeliads as surrogates to predict the distribution of habitat specialist frogs that lack distributional data. We aimed to predict and survey potential new sites for the occurrence of a rare and microendemic bromeliad‐dwelling frog from the Atlantic Rainforest of Brazil. We used Maxent to predict suitable areas based on climate and topographic profiles, combined with 21 occurrence records of bromeliads within which our target frog species (Crossodactylodes itambe) is strictly restricted. The bromeliad‐based models identified four areas potentially suitable, and subsequent surveys revealed an entirely new species of a rare bromeliad‐dwelling frog in one of the areas. We demonstrate that using easy‐to‐survey surrogate species that have a strong relationship with species that are hard to detect has enormous potential to reveal crucial information on the potential ranges and distribution of cryptic taxa. Such a surrogate modelling approach could be extended to other habitat specialist species that lack distribution data, such as amphibians restricted to specific refugia and/or reproduction sites. This could improve the targeting of surveys and increase understanding of the patterns of rarity and the drivers of species distribution, especially for areas with high endemicity and range‐restricted frogs.

Comparative study of the ciliary body and iris morphology in the anterior eye chamber of five different vertebrate classes.

One crucial component of the optical system is the ciliary body (CB). This body secretes the aqueous humour, which is essential to maintain the internal eye pressure as well as the clearness of the lens and cornea. The histological study was designed to provide the morphological differences of CB and iris in the anterior eye chambers of the following vertebrate classes: fish (grass carp), amphibians (Arabian toad), reptiles (semiaquatic turtle, fan-footed gecko, ocellated skink, Egyptian spiny-tailed lizard, Arabian horned viper), birds (common pigeon, common quail, common kestrel), and mammals (BALB/c mouse, rabbit, golden hamster, desert hedgehog, lesser Egyptian jerboa, Egyptian fruit bat). The results showed distinct morphological appearances of the CB and iris in each species, ranging from fish to mammals. The present comparative study concluded that the morphological structure of the CB and iris is the adaptation of species to either their lifestyle or survival in specific habitats.

Exploring the Metatranscriptome of Bacterial Communities of Two Moss Species Thriving in Different Environments-Terrestrial and Aquatic.

Mosses host diverse bacterial communities essential for their fitness, nutrient acquisition, stress tolerance, and pathogen defense. Understanding the microbiome's taxonomic composition is the first step, but unraveling their functional capabilities is crucial for grasping their ecological significance. Metagenomics characterizes microbial communities by composition, while metatranscriptomics explores gene expression, providing insights into microbiome functionality beyond the structure. Here, we present for the first time a metatranscriptomic study of two moss species, Hypnum cupressiforme (Hedw.) and Platyhypnidium riparioides (Hedw.) Dixon., renowned as key biomonitors of atmospheric and water pollution. Our investigation extends beyond taxonomic profiling and offers a profound exploration of moss bacterial communities. Pseudomonadota and Actinobacteria are the dominant bacterial phyla in both moss species, but their proportions differ. In H. cupressiforme, Actinobacteria make up 62.45% and Pseudomonadota 32.48%, while in P. riparioides, Actinobacteria account for only 25.67% and Pseudomonadota 69.08%. This phylum-level contrast is reflected in genus-level differences. Our study also shows the expression of most genes related to nitrogen cycling across both microbiomes. Additionally, functional annotation highlights disparities in pathway prevalence, including carbon dioxide fixation, photosynthesis, and fatty acid biosynthesis, among others. These findings hint at potential metabolic distinctions between microbial communities associated with different moss species, influenced by their specific genotypes and habitats. The integration of metatranscriptomic data holds promise for enhancing our understanding of bryophyte-microbe partnerships, opening avenues for novel applications in conservation, bioremediation, and sustainable agriculture.