Generation Of Novelty Research Articles

Generation of evolutionary novelty by functional shift.

That biological features may change their function during evolution has long been recognized. Particularly, the acquisition of new functions by molecules involved in developmental pathways is suspected to cause important morphologic novelties. However, the current terminology describing functional changes during evolution (co-option or recruitment) fails to recognize important biologic distinctions between diverse evolutionary routes involving functional shifts. The main goal of our work is to stress the importance of an apparently trivial distinction: Whether or not the element that adopts a new function (anything from a morphologic structure to a protein domain) is a single or a duplicated element. We propose that natural selection must act in a radically different way, depending on the historic succession of co-option and duplication events; that is, co-option may provide the selective pressure for a subsequent gene duplication or could be a stabilizing factor that helps maintain redundancy after gene duplication. We review the evidence available on functional changes, focusing whenever possible on developmental molecules, and we propose a conceptual framework for the study of functional shifts during evolution with a level of resolution appropriate to the power of our current methodologies.

Concerted evolution at a multicopy locus in the protozoan parasite Theileria parva: extreme divergence of potential protein-coding sequences.

Concerted evolution of multicopy gene families in vertebrates is recognized as an important force in the generation of biological novelty but has not been documented for the multicopy genes of protozoa. A multicopy locus, Tpr, which consists of tandemly arrayed open reading frames (ORFs) containing several repeated elements has been described for Theileria parva. Herein we show that probes derived from the 5'/N-terminal ends of ORFs in the genomic DNAs of T. parva Uganda (1,108 codons) and Boleni (699 codons) hybridized with multicopy sequences in homologous DNA but did not detect similar sequences in the DNA of 14 heterologous T. parva stocks and clones. The probe sequences were, however, protein coding according to predictive algorithms and codon usage. The 3'/C-terminal ends of the Uganda and Boleni ORFs exhibited 75% similarity and identity, respectively, to the previously identified Tpr1 and Tpr2 repetitive elements of T. parva Muguga. Tpr1-homologous sequences were detected in two additional species of Theileria. Eight different Tpr1-homologous transcripts were present in piroplasm mRNA from a single T. parva Muguga-infected animal. The Tpr1 and Tpr2 amino acid sequences contained six predicted membrane-associated segments. The ratio of synonymous to nonsynonymous substitutions indicates that Tpr1 evolves like protein-encoding DNA. The previously determined nucleotide sequence of the gene encoding the p67 antigen is completely identical in T. parva Muguga, Boleni, and Uganda, including the third base in codons. The data suggest that concerted evolution can lead to the radical divergence of coding sequences and that this can be a mechanism for the generation of novel genes.

Competition and macroevolution: the ghost of competition yet to come?

Abstract Competition theory is the focus of much debate among both neontologists and palaeontologists. This paper explores the expansion of competition theory into macroevolution, since this is the relevant context for palaeobiologists, and challenges the contention that microevolutionary processes are generally inappropriate to the interpretation of macroevolutionary pattern. We show that the term 'interspecific competition' is imprecise, since it conflates processes operating at various hierarchical levels, and recommend a terminological change in accordance with hierarchy theory. Finally, we reassess the role of competition and its absence in radiations. Since evolutionary novelties must be fixed at speciation, and speciation occurs in response to habitat destruction rather than the freeing of ecological space, we believe the role of competition to be minimal in both radiation and the generation of novelty.

Competition and macroevolution: the ghost of competition yet to come?

Competition theory is the focus of much debate among both neontologists and palaeontologists. This paper explores the expansion of competition theory into macroevolution, since this is the relevant context for palaeobiologists, and challenges the contention that microevolutionary processes are generally inappropriate to the interpretation of macroevolutionary pattern. We show that the term 'interspecific competition' is imprecise, since it conflates processes operating at various hierarchical levels, and recommend a terminological change in accordance with hierarchy theory. Finally, we reassess the rôle of competition and its absence in radiations. Since evolutionary novelties must be fixed at speciation, and speciation occurs in response to habitat destruction rather than the freeing of ecological space, we believe the rôle of competition to be minimal in both radiation and the generation of novelty.

The Development and Evolution of the Turtle Body Plan: Inferring Intrinsic Aspects of the Evolutionary Process from Experimental Embryology

Synopsis. The body plan of turtles is unique among tetrapods in the presence ofthe shell. The structure of the carapace involves a unique relationship between the axial and the appendicular skeletons. A common developmental mechanism, an epithelial-mesenchymal interaction, has been identified in the early stages of carapace development by means of basic histological and immunofluorescence techniques. By analogy to other structures ini? tiated by epithelial-mesenchymal interactions, it is hypothesized that carapace development is dependent on this interaction in the body wall. Surgical perturbations were designed to test the causal connection between the epithelial-mesenchymal interaction in the body wall and the unusual placement of the ribs in turtles. By comparison to data available on body wall formation in avian embryos, these experiments also shed light on the segregation of somitic and lateral plate cell populations and the embryonic origin ofthe scapula in turtles. This study specifically addresses the ontogeny of a unique tetrapod body plan. The onto? genetic information can be used to make inferences about the phylogeny of this body plan and how it could have evolved from the more typical primitive tetrapod. On a more general level this study explores the potential role of common developmental mechanisms in the generation of evolutionary novelties, and the developmental incongruities between homol? ogous skeletal elements in different groups of tetrapods.

Ontogeny of the syndesmosis tibiofibularis and the evolution of the bird hindlimb: a caenogenetic feature triggers phenotypic novelty.

The underlying theme of this study is the contribution of developmental mechanisms to the generation of morphological novelty in evolution. The syndesmosis tibiofibularis, an important structural and functional link between the two zeugopod bones of the bird hindlimb, is used as a model for evolutionary novelty. We analyze the structural, developmental and adaptive aspects of its origin in a combined descriptive, experimental, and comparative approach. The ontogeny of the syndesmosis in the chick embryo involves several developmental steps, including the formation of a separate cartilage rudiment that in turn stimulates the formation of an osseous crest on the tibia, which will eventually replace the cartilage element itself. Some of the epigenetic requirements for the formation of the cartilage element and the osseous crest are demonstrated by experimentally increasing the distance between the two zeugopod bones, an operation that results in the absence of both cartilage and crest. Although a syndesmosis tibiofibularis associated with an osseous crest on the tibiotarsus is unique to birds in extant vertebrates, the presence of a distinct crest at the corresponding location in theropod dinosaurs indicates that a syndesmosis also existed in this group of archosaurs. The results of the study suggest that in the case of the syndesmosis tibiofibularis phenotypic evolutionary novelty is based on a caenogenetic feature, i.e. a feature that initially arose in response to changing developmental conditions. In conclusion we propose a model for the stepwise evolutionary modification of the sauropsid hindlimb, integrating adaptive trends and developmental mechanisms that interactively determine the transformations of skeletal limb morphology. The syndesmosis tibiofibularis and the mechanisms of its formation are not only shown to have played a key-role in this process, but its presence in theropod dinosaurs also points towards the origin of birds.

Intelligence Based on Knowledge – Knowledge Based on Intelligence

AbstractThe title of this review indicates the fundamental difficulty of defining the difference between intelligence and knowledge. Here some of the basic differences and similarities are discussed, and by analogy with energy, the author postulates the existence of potential and kinetic intelligence. This leads him to the definition of intelligence as the generation of successful novelty. IQ tests and the difficulty of designing a balanced test are an integral part of the discussion which leads the author to his novel definition of intelligence.