Fungal Monocultures Research Articles

Bioaugmentation protocols involving Methanobrevibacter thaueri and Pecoramyces ruminantium for investigating lignocellulose degradation and methane production from alfalfa stalks

Two protocols involving batch cultures were used to investigate the bioaugmentation of methane production by Pecoramyces ruminantium, and Methanobrevibacter thaueri. Protocol I examined the effect of altering the proportion of the microbial constituents in inoculum on alfalfa stalk fermentations and showed a 25 % improvement in dry matter loss in cultures where the inoculum contained just 30 % of co-culture and 70 % of fungal monoculture. Protocol II involved consecutive cultures and alternating inoculations. This protocol resulted in 17–22 mL/g DM methane production with co-cultures a 30 % increase in methane relative to the fungal monoculture. Both protocols indicate that the co-culture rapidly dominated and was more resilient than the monoculture. Synergistic interaction between fungus and methanogen, promoted more efficient lignocellulose degradation and higher methane yield. This study highlighted the potential of microbial co-cultures for enhancing methane production from lignocellulosic biomass, offering a promising bioaugmentation strategy for improving biogas yields and waste valorization.

High-quality RNA extraction and the regulation of genes encoding cellulosomes are correlated with growth stage in anaerobic fungi.

Anaerobic fungi produce biomass-degrading enzymes and natural products that are important to harness for several biotechnology applications. Although progress has been made in the development of methods for extracting nucleic acids for genomic and transcriptomic sequencing of these fungi, most studies are limited in that they do not sample multiple fungal growth phases in batch culture. In this study, we establish a method to harvest RNA from fungal monocultures and fungal-methanogen co-cultures, and also determine an optimal time frame for high-quality RNA extraction from anaerobic fungi. Based on RNA quality and quantity targets, the optimal time frame in which to harvest anaerobic fungal monocultures and fungal-methanogen co-cultures for RNA extraction was 2-5 days of growth post-inoculation. When grown on cellulose, the fungal strain Anaeromyces robustus cocultivated with the methanogen Methanobacterium bryantii upregulated genes encoding fungal carbohydrate-active enzymes and other cellulosome components relative to fungal monocultures during this time frame, but expression patterns changed at 24-hour intervals throughout the fungal growth phase. These results demonstrate the importance of establishing methods to extract high-quality RNA from anaerobic fungi at multiple time points during batch cultivation.

An in vitro study of interactions of Candida albicans with Klebsiella pneumoniae and Enterococcus faecalis isolated from intestinal microbiome of HIV infected patients

The aim: In vitro identification of targets for antagonism factors in klebsiellas and enterococci for Candida albicans isolated from the intestinal microbiome of HIV infected patients.Materials and methods. The tests were performed using 38 Candida albicans strains, 28 Klebsiella pneumoniae strains, and 30 Enterococcus faecalis strains isolated from the intestinal microbiome of 89 HIV infected children. The mean age of the patients was 24 ± 2 months; the group consisted of 49 (55%) boys and 40 (45%) girls. Microorganisms were isolated from the intestinal biotope using such selective media as HiChrome Candida Agar, HiChrome Klebsiella Selective Agar Base, and Enterococcus Agar; the study included identification of species. Model experiments were performed to study anti-catalase activity of E. faecalis exometabolites and the impact of K. pneumoniae on morphological transformation of C. albicans fungi.Results. Klebsiellas decrease the intensity of germ tube formation in C. albicans by 58.7% (p 0.01). When cocultured, 12.3% of the yeast cells produce germ tubes, while 29.8% of transformed cells was detected in the fungal monoculture. It has been found that exometabolites of 65.7% of E. faecalis strains decrease production of catalase in C. albicans. The initial catalase level in untreated cultures of C. albicans averages 1.02 µmol/min of optical density; after they are treated with E. faecalis exometabolites, the level decreases to 0.55 µmol/min, i.e. by 46.1% (p 0.05).Conclusions. K. pneumoniae and E. faecalis demonstrate antagonism of different intensity toward C. albicans. Morphological transformation and catalase production are targets for antagonism factors of facultative microbiota in C. albicans.

Contrasting regulation of live Bacillus cereus No.1 and its volatiles on Shiraia perylenequinone production

BackgroundFungal perylenequinones (PQs) are a class of photoactivated polyketide mycotoxins produced by plant-associated fungi. Hypocrellins, the effective anticancer photodynamic therapy (PDT) agents are main bioactive PQs isolated from a bambusicolous Shiraia fruiting bodies. We found previously that bacterial communities inhabiting fungal fruiting bodies are diverse, but with unknown functions. Bacillus is the most dominant genus inside Shiraia fruiting body. To understand the regulation role of the dominant Bacillus isolates on host fungus, we continued our work on co-culture of the dominant bacterium B. cereus No.1 with host fungus Shiraia sp. S9 to elucidate bacterial regulation on fungal hypocrellin production.ResultsResults from "donut" plate tests indicated that the bacterial culture could promote significantly fungal PQ production including hypocrellin A (HA), HC and elsinochrome A-C through bacterial volatiles. After analysis by gas chromatograph/mass spectrometer and confirmation with commercial pure compounds, the volatiles produced by the bacterium were characterized. The eliciting roles of bacterial volatile organic compounds (VOCs) on HA production via transcriptional regulation of host Shiraia fungus were confirmed. In the established submerged bacterial volatile co-culture, bacterial volatiles could not only promote HA production in the mycelium culture, but also facilitate the release of HA into the medium. The total production of HA was reached to 225.9 mg/L, about 1.87 times that of the fungal mono-culture. In contrast, the live bacterium suppressed markedly fungal PQ production in both confrontation plates and mycelium cultures by direct contact. The live bacterium not only down-regulated the transcript levels of HA biosynthetic genes, but also degraded extracellular HA quickly to its reductive product.ConclusionOur results indicated that bacterial volatile release could be a long-distance signal to elicit fungal PQ production. Biodegradation and inhibition by direct contact on fungal PQs were induced by the dominate Bacillus to protect themselves in the fruiting bodies. This is the first report on the regulation of Bacillus volatiles on fungal PQ production. These findings could be helpful for both understanding the intimate fungal–bacterial interactions in a fruiting body and establishing novel cultures for the enhanced production of bioactive PQs.Graphical

Surface Area of Wood Influences the Effects of Fungal Interspecific Interaction on Wood Decomposition-A Case Study Based on Pinus densiflora and Selected White Rot Fungi.

Wood decomposer basidiomycetes are the major agents of lignocellulose decomposition in dead wood. As their interspecific interaction affects wood decomposition, difference in interaction area may alter the magnitude of the effects. This study examines the effects of wood surface area on decomposition by interacting basidiomycetes using laboratory incubation experiments with pine sapwood as a model. Two types of pine wood blocks with equal volume but identical surface area were prepared for colonization by one of four white rot basidiomycete species. The colonized wood blocks were then placed on agar media already colonized by the same strain or one of the other species, simulating fungal monoculture and interspecific interactions on wood surface. Results demonstrated that the decay rate of wood was greater in wood with larger surface, and wood decay was accelerated by the interaction of two fungal species in wood with larger surface but not in wood with smaller surface. In contrast, lignin decomposition was influenced by the competitor in wood with smaller surface but not in wood with larger surface. These results suggest that the observed promotion of decay by fungal interspecific interaction might not be attributable to the resource partitioning between fungal species but to the accelerated carbon of competition cost compensation in this case.

Efficient biodegradation of Congo red dye using fungal consortium incorporated with Penicillium oxalicum and Aspergillus tubingensis.

A novel approach had been carried out to develop fungal consortium, namely, RH-2, containing two marine procured fungal isolates in order to evaluate biodegradation of recalcitrant diazo dye Congo red. The fungi were isolated from the seacoast of Diu, India. According to the ITS sequencing, the strains were identified as Penicillium oxalicum (DS-2) and Aspergillus tubingensis (DS-4). Discs of 12mm were cut out from the edge of both the fungal isolates (DS-2 and DS-4) and inoculated in flasks consisting of potato dextrose broth with 100mg/L Congo red for the development of fungal consortium RH-2. The degradation by the fungal consortium RH-2 was more effective than the fungal monocultures DS-2 and DS-4 with the respective degradation reaching 97.15 ± 0.15%, 68.96 ± 0.09%, and 29.96 ± 0.21% in addition of yeast extract (1% w/v) within 12h. The influence of dextrose (1% w/v), yeast extract (1% w/v), pH 5, and salt concentration (1% w/v) enhanced the degradation potential of fungal consortium RH-2. The maximal degradation was correlated with the production of laccase (12.498 ± 0.21 U/mL) and manganese peroxidase (10.314 ± 0.25 U/mL). The catabolism of Congo red was confirmed by UV-Visible spectroscopic analysis (Congo red λ-max = 499nm) and ATR-FTIR spectroscopic analysis. The filtrates obtained after Congo red degradation were also evaluated for microbial toxicity against bacteria (Bacillus haynesii) and phytotoxicity analysis on plant seed (Trigonella foenum) which revealed that the filtrate acquired after the treatment of Congo red by fungal consortium RH-2 was less toxic than the original dye in nature. A novel aspect is determined by the evidence of mutualistic interaction between two different fungi for the rapid decolorization and degradation of dye providing a prospective of utilizing the developed consortium RH-2 as a cost-effective approach in textile wastewater treatment for cleaner environment.

Coniochaeta fungus benefits from its intracellular bacteria to form biofilm and defend against other fungi.

During cultivation of a gastric fungus, Coniochaeta polymorpha, growth of Nocardia colonies on top of the fungal culture raised the question whether bacteria originated from inside of fungus. In this study, the likelihood of intracellular origin of bacteria as well as interaction of two microorganisms was assessed. Fluorescence and electron microscopy showed occurrence of several bacterial cells in fungal cytoplasm. A thick biofilm was observed on the surface of co-culture compared with thin one on bacterial and none on fungal monocultures. Field emission scanning electron microscopy (FESEM) micrographs of co-culture showed a dense network of fungal and bacterial cells embedded in a slime-like layer. Dual cultures revealed antagonistic activity of both fungus and bacteria against three Candida species. These findings indicate that Nocardia isolate identified in this study originated from the inside of fungus C. polymorpha. Intracellular bacteria could benefit the fungal host by producing a rigid biofilm and an antifungal compound.

Synergistic Treatment of Alkali Lignin via Fungal Coculture for Biofuel Production: Comparison of Physicochemical Properties and Adsorption of Enzymes Used As Catalysts

White-rot fungi (WRF) is capable of producing extracellular enzymes that degrade lignin structure and facilitate biofuel production from lignocellulosic biomass wastes. However, fungal monocultures are constrained by low activities of the lignin-degrading enzyme system, leading to poor treatment efficiency and a long duration, which are not advantageous for large-scale applications. To improve enzyme production and enhance lignin degradation, a novel coculture system was proposed using the white-rot fungi Phanerochaete chrysosporium and Irpex lacteus CD2. The degradation efficiency of the alkali lignin by the fungal coculture was 26.4%, which was higher than that of the fungal monocultures. It was due to the production of lignin degrading enzymes was promoted in the liquid medium. Scanning electron microscopy (SEM), fourier transform infrared (FTIR), thermogravimetric (TG) and mercury porosimeter analyses results revealed that the alkali lignin treated with the fungal coculture had the largest porosity, and the degree of destruction of the alkali lignin structure by the fungal coculture was higher than that of the fungal monocultures. Meanwhile, the nonproductive adsorption of enzymes on alkali lignin was significantly reduced by 61.0% when the biomass was treated with the fungal coculture. As a result, the nonproductive adsorption was remarkably reduced, while it significantly improved the cellulase catalysis efficiency. These results demonstrated the synergistic effects of the fungal coculture for biomass treatment and provided a new approach for increasing lignin degradation while improving enzymatic catalysis and biofuel production through fungal coculture.

The Longevity of Colonies of Fungus-Growing Termites and the Stability of the Symbiosis.

Simple SummaryFungus-growing termites cultivate monocultures of a specific fungi (of a genus called Termitomyces) for food in their colony, analogously to human farmers growing crops. The termites forage for dead plant material in the environment, bring this into the mound and provide it to the fungus as a growth substrate. After fungal growth, the termites use the mixture of fungus and degraded plant material and also the asexual spores produced by the fungus as food. They also use the spores to inoculate new fungus gardens. The termite-fungus symbiosis is obligatory for both partners, the termites provide growth substrate and a protected growth environment for the fungi in exchange for a nitrogen-rich food source. Termites and fungi have been partners for more than 30 million years and although the symbiosis looks harmonious, the partners have some hidden conflicts about reproduction and resource investment. These conflicts raise questions on how the symbiosis apparently has remained stable for such a long time. We summarize our current understanding on the short-term stability of a single generation of termites, and also the long-term stability of the symbiosis across multiple generations. We identify unsolved questions in the field and suggest possible avenues to address these questions.The agricultural mutualistic symbiosis between macrotermitine termites and Termitomyces fungi is obligate for both partners. The termites provide a protective growth environment for the fungus by cultivating it inside their colony and providing it with foraged plant material. The termites use the fungus for plant substrate degradation, and the production of asexual fruiting bodies for nourishment and re-inoculation of the fungus garden. The termite colony can reach an age of up to several decades, during which time it is believed that a single fungal monoculture is asexually propagated by the offspring of a single founding royal pair. The termite-fungus mutualism has a long evolutionary history dating back more than 30 million years. Both on the time-scale of a termite colony lifespan and that of the mutualistic symbiosis, questions arise about stability. We address the physical stability of the mound, the termite colony and the monoculture fungal garden during a colony’s lifetime. On the long-term evolutionary scale, we address the stability of the symbiosis, where horizontal transmission of the symbiotic fungus raises the question of how the mutualistic interaction between host and symbiont persists over generations.

Biodegradation of Reactive Orange 16 azo dye by simultaneous action of Pleurotus ostreatus and the yeast Candida zeylanoides.

The purpose was to investigate a simultaneous biodegradation of the recalcitrant monoazo dye Reactive Orange 16 (RO16) in a mixed culture consisting of a biofilm of Pleurotus ostreatus-colonizing polyamide carrier and a suspension of the yeast Candida zeylanoides to see their biological interactions and possible synergistic action during degradation. Decolorization in the mixed culture was more effective than in the fungal monoculture, the respective decolorizations reaching 87.5% and 70% on day 11. The proliferation of yeast was reduced compared with the C. zeylanoides monoculture but enabled the yeast to participate in decolorization. The interaction of P. ostreatus with the yeast resulted in a gradual decrease of fungal manganese-dependent peroxidase (MnP) and laccase activities. Gas chromatography-mass spectrometry (GC-MS) analysis of the degradation products brought evidence that P. ostreatus split the dye molecule asymmetrically to provide 4-(ethenylsulfonyl) benzene whose concentration was much decreased in the mixed culture suggesting its increased metabolization in the presence of the yeast. In contrast, C. zeylanoides split the azo bond symmetrically producing the metabolites 4-(ethenylsulfonyl) aniline and α-hydroxybenzenepropanoic acid. Those metabolites were rapidly degraded in the mixed culture. A novel aspect is represented by the evidence of a mutual cooperative action of the fungal and yeast microorganisms in the mixed culture resulting in rapid decolorization and degradation of the dye.

Top-Down Enrichment Guides in Formation of Synthetic Microbial Consortia for Biomass Degradation.

Consortium-based approaches are a promising avenue toward efficient bioprocessing. However, many complex microbial interactions dictate community dynamics and stability that must be replicated in synthetic systems. The rumen and/or hindguts of large mammalian herbivores harbor complex communities of biomass-degrading fungi and bacteria, as well as archaea and protozoa that work collectively to degrade lignocellulose, yet the microbial interactions responsible for stability, resilience, and activity of the community remain largely uncharacterized. In this work, we demonstrate a "top-down" enrichment-based methodology for selecting a minimal but effective lignocellulose-degrading community that produces methane-rich fermentation gas (biogas). The resulting enrichment consortium produced 0.75-1.9-fold more fermentation gas at 1.4-2.1 times the rate compared to a monoculture of fungi from the enrichment. Metagenomic sequencing of the top-down enriched consortium revealed genomes encoding for functional compartmentalization of the community, spread across an anaerobic fungus (Piromyces), a bacterium (Sphaerochaeta), and two methanogenic archaea (Methanosphaera and Methanocorpusculum). Guided by the composition of the top-down enrichment, several synthetic cocultures were formed from the "bottom-up" using previously isolated fungi, Neocallimastix californiae and Anaeromyces robustus paired with the methanogen Methanobacterium bryantii. While cross-feeding occurred in synthetic co-cultures, removal of fungal metabolites by methanogens did not increase the rate of gas production or the rate of substrate deconstruction by the synthetic community relative to fungal monocultures. Metabolomic characterization verified that syntrophy was established within synthetic co-cultures, which generated methane at similar concentrations compared to the enriched consortium but lacked the temporal stability (resilience) seen in the native system. Taken together, deciphering the membership and metabolic potential of an enriched gut consortium enables the design of methanogenic synthetic co-cultures. However, differences in the growth rate and stability of enriched versussynthetic consortia underscore the difficulties in mimicking naturally occurring syntrophy in synthetic systems.

Combined Genomic, Transcriptomic, Proteomic, and Physiological Characterization of the Growth of Pecoramyces sp. F1 in Monoculture and Co-culture With a Syntrophic Methanogen.

In this study, the effects of a syntrophic methanogen on the growth of Pecoramyces sp. F1 was investigated by characterizing fermentation profiles, as well as functional genomic, transcriptomic, and proteomic analysis. The estimated genome size, GC content, and protein coding regions of strain F1 are 106.83 Mb, 16.07%, and 23.54%, respectively. Comparison of the fungal monoculture with the methanogen co-culture demonstrated that during the fermentation of glucose, the co-culture initially expressed and then down-regulated a large number of genes encoding both enzymes involved in intermediate metabolism and plant cell wall degradation. However, the number of up-regulated proteins doubled at the late-growth stage in the co-culture. In addition, we provide a mechanistic understanding of the metabolism of this fungus in co-culture with a syntrophic methanogen. Further experiments are needed to explore this interaction during degradation of more complex plant cell wall substrates.

Solid-state fermentation with Rhizopus oligosporus and Yarrowia lipolytica improved nutritional and flavour properties of okara

Okara (soybean pulp) is a processing by-product generated in considerable amounts by the soy food industry. Due to its fibrous mouthfeel, low digestibility, presence of anti-nutrients and grassy off-odour, it is often under-utilised. To improve its composition, okara was fermented using a fungal monoculture of Rhizopus oligosporus (RO), and a coculture of R. oligosporus and yeast Yarrowia lipolytica (ROYL). After fermentation, the digestibility, nutritional value and flavour of okara were enhanced by RO and ROYL. Coculture of fungi and yeast seemed to exert synergistic effects. Compared to the unfermented okara, ROYL coculture contained 33% less insoluble dietary fibre, 16% less phytic acid, 176% more soluble dietary fibre, 254% more free amino acids, 179% more isoflavone aglycones and 197% more free phenolic acids. After fermentation, RO monoculture contained more alcohols and esters, while ROYL coculture contained more acids and volatile phenols. These improvements in the nutritional and flavour properties of the fermented okara could expand its valorisation by the food industry.

Indigenously associated methanogens intensified the metabolism in hydrogenosomes of anaerobic fungi with xylose as substrate.

Anaerobic fungi are potent lignocellulose degraders, but have not yet been exploited in this capacity, largely owing to their poor metabolic characterization. In the current study, a time course of fermentation was conducted to study the effect of the co-cultured methanogens on xylose metabolism by anaerobic fungi. The fermentation end-products from anaerobic fungal monoculture were H2 (6.7 ml), CO2 (65.7 ml), formate (17.90 mM), acetate (9.00 mM), lactate (11.89 mM), ethanol, and malate after 96 h fermentation. Compared to the monoculture, the end-products of co-culture shifted to more CO2 (71.8 ml) and acetate (15.20 mM), methane (14.9 ml), less lactate (5.28 mM), and hardly detectable formate and H2 at the end of fermentation. After 48 h, accumulated formate was remarkably consumed by co-cultured methanogens, accompanied by significantly increased acetate, CO2 and pH, and decreased lactate and malate. Xylose utilization, in both cultures, was similar during fermentation. However, the relative flux of carbon in hydrogenosomes in the co-culture was higher than that in the monoculture. In conclusion, the co-culture with methanogens enhanced "energy yields" of anaerobic fungi by removing the accumulated formate, decreased the metabolism in cytosol, for example, the lactate pathway, and increased the metabolism in hydrogenosomes, for example, the acetate pathway.

Effect of the Associated Methanogen Methanobrevibacter thaueri on the Dynamic Profile of End and Intermediate Metabolites of Anaerobic Fungus Piromyces sp. F1.

Although the scheme of metabolic pathways involved in the production of the major end products has been described, the dynamic profile of metabolites of anaerobic fungi co-cultured with methanogens is limited, especially for the intermediate metabolites. In the present study, the fermentation of the co-culture of Piromyces sp. F1 and Methanobrevibacter thaueri on glucose was investigated. The presence of methanogens shortened the growth lag time of anaerobic fungi and enhanced the total gas production. The occurrence of the maximum cell dry weight and the disappearance of most of the substrate were observed at 24h for the co-culture and 48h for the fungal mono-culture. In the co-culture, hydrogen was detected at a very low level during fermentation, and formate transitorily accumulated at 24h and disappeared at 48h, resulting in an increase of pH. Acetate was higher during the fermentation in the co-culture (P<0.05), while lactate and ethanol were higher only in the initial stage of fermentation (P<0.05). After 48h, lactate in the mono-culture became much higher than that in the co-culture (P<0.05), and ethanol tended to remain the same in both cultures. Moreover, malate tended to be exhausted in the co-culture, while it accumulated in the mono-culture. Citrate was also detected in both co-culture and mono-culture. Collectively, these results suggest that methanogen enhanced the malate pathway and weakened the lactate pathway of anaerobic fungus.

Transcriptomic responses of mixed cultures of ascomycete fungi to lignocellulose using dual RNA-seq reveal inter-species antagonism and limited beneficial effects on CAZyme expression

Gaining new knowledge through fungal monoculture responses to lignocellulose is a widely used approach that can lead to better cocktails for lignocellulose saccharification (the enzymatic release of sugars which are subsequently used to make biofuels). However, responses in lignocellulose mixed cultures are rarely studied in the same detail even though in nature fungi often degrade lignocellulose as mixed communities.Using a dual RNA-seq approach, we describe the first study of the transcriptional responses of wild-type strains of Aspergillus niger, Trichoderma reesei and Penicillium chrysogenum in two and three mixed species shake-flask cultures with wheat straw.Based on quantification of species-specific rRNA, a set of conditions was identified where mixed cultures could be sampled so as to obtain sufficient RNA-seq reads for analysis from each species. The number of differentially-expressed genes varied from a couple of thousand to fewer than one hundred. The proportion of carbohydrate active enzyme (CAZy) encoding transcripts was lower in the majority of the mixed cultures compared to the respective straw monocultures. A small subset of P. chrysogenum CAZy genes showed five to ten-fold significantly increased transcript abundance in a two-species mixed culture with T. reesei. However, a substantial number of T. reesei CAZy transcripts showed reduced abundance in mixed cultures. The highly induced genes in mixed cultures indicated that fungal antagonism was a major part of the mixed cultures. In line with this, secondary metabolite producing gene clusters showed increased transcript abundance in mixed cultures and also mixed cultures with T. reesei led to a decrease in the mycelial biomass of A. niger. Significantly higher monomeric sugar release from straw was only measured using a minority of the mixed culture filtrates and there was no overall improvement.This study demonstrates fungal interaction with changes in transcripts, enzyme activities and biomass in the mixed cultures and whilst there were minor beneficial effects for CAZy transcripts and activities, the competitive interaction between T. reesei and the other fungi was the most prominent feature of this study.

Complementarity in both plant and mycorrhizal fungal communities are not necessarily increased by diversity in the other

SummaryHigher species diversity can improve community performance within a species guild when different species complement each other in their use of the available niche, such as through resource partitioning. However, species in one guild of organisms may act as resources for another such that the diversity in one guild alters the realized niche for species in another. Yet, it remains largely untested as to whether diversity in one guild of organisms influences species complementarity in another.The productivity and diversity in plant and arbuscular mycorrhizal (AM) fungal communities can be positively associated with each other through their typically mutualistic exchange of resources. Here, we utilized these two interacting species guilds to determine whether greater diversity in one influences species complementarity in the other. This was performed by creating monocultures and a mixture of a grass, forb and legume in a full factorial design with monocultures and a mixture of fourAMfungi.The presence ofAMfungi reduced differences in the performance among plant species and greater diversity of fungi generally improved plant productivity over the average of the fungal monocultures. However, plant species complementarity was not greatest with a higher diversity of fungi and was only positive with a particular fungal monoculture.AMfungal abundance was not affected by plant diversity, but was greatly reduced in the grass monoculture compared to the other plant communities. Variation in fungal complementarity among plant communities was low overall and was little influenced by plant diversity.Synthesis. Using a model plant‐mycorrhizal system, our results suggest that the composition rather than the diversity of species within one guild may be more influential in determining how species function within an associated species guild. However, our model system does not represent a broad gradient of diversity in either plant or fungal communities and only assesses the initial growth phase. Nonetheless, our results highlight that changes in species compositions in one species guild can affect the functioning of species diversity in another.

Factors Governing Degradation of Phenol in Pharmaceutical Wastewater by White-rot Fungi: A Batch Study

Phenol is a major contaminant in the industrial water effluent, including pharmaceutical wastewaters. Although several physic-chemical methods for removal of phenol exist, they are of high cost, low efficiency, and generate toxic by-products. Thus, there is a need to develop technologies for biological removal of phenol from wastewater. In this study, the degradation of phenol in pharmaceutical wastewater by monoculture of white-rot fungi was studied. The degradation rate of total phenol in batch flasks by four fungal monocultures of Trametes versicolor, Phanerochaete chrysosporium, Gloeophyllum trabeum and Irpex lacteus in synthetic medium was compared. The results showed that white-rot fungus T.Versicolor was the most effective of the species. Further selection tests of optimal conditions of biomass concentration, pH and temperature were done, indicating that optimal conditions of degradation are at pH 5-6, temperature 25 °C, and biomass inoculum 10% (v/v). Under optimal conditions, total phenol was reduced by 93%, concentration of total phenol decreasing from 420±12 mg/l to 29±1 mg/l in seven days, with T.Versicolor specie. This study suggested that biological treatment with fungi may effectively be used as a pre-treatment stage for removal of phenol before polishing wastewater with conventional biological methods.

English

This study intended to compare the efficiency of fungal monocultures and co-cultures in the simultaneous delignification and saccharification of kitchen waste and Eichhornia crassipes in order to subject the hydrolysate into biofuel production. Three fungal isolates of genus Trichoderma, Aspergillus, Pycnoporus and an unidentified strain (F113) were grown in mono and co-cultures and the extracted enzymes were used for the degradation. Co-culture of Trichoderma spp with the other fungi improved its enzyme activity while the other co-cultures did not show significantly improved enzymatic degradation compared to monocultures. The highest percentage of saccharification (over total dry weight) achieved were 11.9% with kitchen waste after seven days and 9.8% with E. crassipes after 4 days. The drop in degradation rate normally seen after complete digestion of amorphous cellulose was not apparent probably due to the grinding of the substrates to fine particle size. Key words: Fungal co-culture, biofuel, cellulase, kitchen waste, invasive weeds.

Filipins: the first antifungal “weed killers” identified from bacteria isolated from the trap-ant

Allomerus ants cultivate fungus to fabricate their insect traps. Speculation is that the ants employ actinomycetes to help achieve fungal monoculture. From an associated actinomycete we identify the first antifungal compounds and encoding genes.